Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 4.9e-183 644.4 347 100.0
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 1.1e-177 626.7 347 96.5
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 9.3e-174 613.6 347 94.2
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 2.1e-170 602.4 349 91.4
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 3.4e-168 595.1 347 88.2
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 7.1e-166 587.4 343 87.5
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 4.8e-162 574.7 347 84.4
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 9.9e-160 567.0 349 86.8
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 9.9e-160 567.0 349 86.8
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 9.9e-160 567.0 349 86.8
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 8.4e-159 563.9 348 83.6
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 3.0e-156 555.4 347 81.8
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 3.0e-156 555.4 347 81.8
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 3.0e-156 555.4 347 81.8
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 2.5e-155 552.4 349 82.8
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 4.3e-155 551.6 347 81.8
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 4.3e-155 551.6 347 81.8
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 8.4e-151 537.3 338 80.2
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 5.3e-145 518.1 341 77.7
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 2.8e-130 469.2 347 68.9
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 4.8e-130 468.4 314 72.0
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 3.1e-129 465.7 347 65.7
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 4.1e-129 465.3 337 66.8
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 4.5e-128 461.8 348 67.2
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 1.7e-127 459.9 317 70.3
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 3.2e-126 455.7 348 67.0
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 1.2e-125 453.8 350 64.0
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 1.6e-125 453.4 337 69.1
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 1.0e-124 450.7 314 70.7
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 1.8e-124 449.9 314 70.7
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 3.0e-124 449.1 312 68.3
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 6.7e-124 448.0 336 67.6
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.1e-123 447.2 314 70.1
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 1.5e-123 446.8 313 70.3
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 3.3e-123 445.7 346 65.6
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 1.3e-122 443.7 349 64.2
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 2.8e-122 442.6 314 68.5
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 3.7e-122 442.2 316 68.7
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 6.3e-122 441.4 349 63.0
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 6.3e-122 441.4 347 64.0
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 1.4e-121 440.3 348 64.1
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 1.8e-121 439.9 314 70.4
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 3.1e-121 439.1 363 60.3
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 7.0e-121 438.0 343 64.1
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 7.0e-121 438.0 312 67.9
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 2.9e-119 432.6 314 65.0
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 2.9e-119 432.6 348 61.5
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 2.9e-119 432.6 314 67.2
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 6.5e-119 431.4 314 69.1
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 1.9e-118 429.9 347 65.1
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 1.9e-118 429.9 312 67.6
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 1.9e-118 429.9 312 67.6
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 2.5e-118 429.5 341 63.0
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 5.5e-118 428.3 341 63.0
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 1.2e-117 427.2 347 63.4
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 2.1e-117 426.4 313 67.4
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 3.6e-117 425.6 342 63.2
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 4.7e-117 425.2 341 62.5
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 6.1e-117 424.9 338 64.5
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 8.0e-117 424.5 315 65.7
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 1.4e-116 423.7 313 67.7
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 2.3e-116 422.9 312 66.3
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 3.0e-116 422.5 344 61.9
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 4.0e-116 422.2 337 61.7
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 8.8e-116 421.0 343 63.3
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 1.2e-115 420.6 345 63.2
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 2.0e-115 419.9 355 59.4
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 3.7e-114 415.6 350 58.6
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 1.1e-113 414.1 348 58.9
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 1.4e-113 413.7 345 61.4
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 2.4e-113 412.9 313 65.2
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 4.1e-113 412.1 314 66.2
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 9.1e-113 411.0 315 66.3
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 1.2e-112 410.6 341 59.8
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 1.2e-112 410.6 345 61.2
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 1.6e-112 410.2 314 63.4
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 2.0e-112 409.8 353 59.5
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 3.5e-112 409.1 345 60.9
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 4.5e-112 408.7 338 61.2
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 2.2e-111 406.4 340 61.5
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 2.2e-111 406.4 347 59.7
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 5.0e-111 405.2 330 63.6
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 6.5e-111 404.8 348 60.6
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 8.5e-111 404.4 311 64.3
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 1.9e-110 403.3 314 63.4
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 3.2e-110 402.5 313 63.6
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 5.5e-110 401.7 317 62.5
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 1.2e-109 400.6 313 61.0
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 2.1e-109 399.8 346 60.1
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.0e-108 397.5 338 57.4
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 1.0e-108 397.5 338 57.4
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 1.4e-108 397.1 338 62.4
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 8.8e-108 394.4 349 59.0
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 1.5e-107 393.7 315 63.5
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 3.4e-107 392.5 336 61.0
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 4.4e-107 392.1 314 62.4
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 1.4e-105 387.1 305 62.3
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.8e-105 386.7 334 58.4
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 2.4e-105 386.3 339 56.3
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 2.0e-104 383.3 314 61.5
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 3.5e-104 382.5 348 59.5
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 1.3e-103 380.6 349 57.9
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 2.3e-103 379.8 349 58.2
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 1.6e-101 373.6 350 57.1
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 2.1e-101 373.2 305 63.3
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.0e-100 370.9 342 55.8
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 1.2e-99 367.5 269 65.4
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 2.0e-99 366.7 351 55.6
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 2.0e-99 366.7 351 55.6
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 4.4e-99 365.5 348 57.2
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 2.2e-98 363.2 309 58.9
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 4.1e-97 359.0 281 65.5
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 7.8e-96 354.8 311 57.9
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 1.1e-94 350.9 347 54.2
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 5.6e-94 348.6 325 56.3
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 5.6e-94 348.6 336 52.1
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 7.3e-94 348.2 302 57.9
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 2.1e-93 346.7 337 50.7
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 7.5e-91 338.2 303 56.4
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 9.8e-91 337.8 353 50.7
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 9.8e-91 337.8 307 55.4
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 8.3e-90 334.7 263 62.4
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 8.3e-90 334.7 257 65.4
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 1.4e-89 334.0 303 55.4
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 5.4e-89 332.0 310 52.3
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 5.4e-89 332.0 339 49.9
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 9.2e-89 331.3 315 54.0
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 1.6e-88 330.5 377 49.1
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 1.6e-88 330.5 339 49.9
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 3.5e-88 329.3 339 50.1
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 4.6e-88 328.9 310 54.2
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 6.0e-88 328.6 336 51.8
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 3.9e-87 325.9 336 51.5
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 6.6e-87 325.1 314 52.2
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 2.5e-86 323.2 344 50.3
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 2.8e-85 319.7 313 51.1
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 4.4e-83 312.4 310 50.3
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 3.7e-82 309.3 349 45.0
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.4e-81 306.6 268 55.2
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 1.6e-80 303.9 338 48.8
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 4.6e-80 302.4 288 54.5
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 6.6e-79 298.5 310 46.8
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 2.5e-78 296.6 313 47.3
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 2.1e-77 293.5 283 53.4
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 2.8e-77 293.1 255 57.6
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 5.8e-75 285.4 189 70.4
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.9e-74 283.1 191 70.2
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.4e-73 280.8 228 61.8
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 5.4e-73 278.9 189 69.8
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 2.7e-72 276.6 179 69.3
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 8.1e-69 265.0 313 47.9
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.1e-68 264.6 189 65.6
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 2.4e-68 263.5 190 66.8
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 3.6e-61 239.6 182 65.9
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 1.2e-59 234.6 166 74.1
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 4.2e-57 226.1 310 42.9
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.1e-56 223.8 184 57.6
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 6.0e-56 222.2 190 56.8
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 1.3e-53 214.5 232 47.8
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 1.8e-52 210.7 225 50.7
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 4.9e-50 202.6 229 52.8
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 2.1e-45 187.2 150 64.7
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 1.0e-42 178.3 335 33.4
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 2.5e-38 163.7 104 80.8
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 9.6e-38 161.8 172 50.0
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 2.9e-34 150.2 161 52.2
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 2.3e-31 140.6 92 71.7
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 7.4e-30 135.6 89 68.5
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 2.4e-28 130.6 95 66.3
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 5.3e-28 129.4 336 31.8
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 2.1e-24 117.5 77 68.8
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 2.0e-22 110.9 75 77.3
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 2.0e-19 100.9 81 56.8
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 1.7e-18 97.8 57 82.5
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 3.8e-18 96.7 80 55.0
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 1.1e-17 95.1 85 52.9
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 3.0e-15 87.0 74 64.9
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 4.4e-14 83.2 57 71.9
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 2.4e-12 77.4 74 51.4
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 2.6e-11 73.9 49 63.3
AagrBONN_evm.TU.Sc2ySwM_228.3672 Anthoceros agrestis HOM05D003755 ORTHO05D004385 2.6e-06 57.4 70 47.1


User provided reference genes

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