Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G13980 Arabidopsis lyrata HOM05D011097 ORTHO05D012775 7.2e-81 303.9 159 100.0
AL4G45770 Arabidopsis lyrata HOM05D011097 ORTHO05D012775 8.9e-47 190.7 313 45.7
AT2G46455 Arabidopsis thaliana HOM05D011097 ORTHO05D012775 5.1e-34 148.3 114 72.8
Thhalv10001729m.g Eutrema salsugineum HOM05D011097 ORTHO05D012775 1.5e-30 136.7 121 65.3
C04p01510 Brassica napus HOM05D011097 ORTHO05D012775 5.2e-23 111.7 262 36.6
A05p01330 Brassica napus HOM05D011097 ORTHO05D012775 2.6e-22 109.4 116 56.9
BraA05t19131Z Brassica rapa HOM05D011097 ORTHO05D012775 2.6e-22 109.4 116 56.9
C04p01470 Brassica napus HOM05D011097 ORTHO05D012775 7.6e-22 107.8 189 43.4
Sp4g28460 Schrenkiella parvula HOM05D011097 ORTHO05D012775 2.2e-21 106.3 292 35.6
BolC4t21802H Brassica oleracea HOM05D011097 ORTHO05D012775 6.4e-21 104.8 289 34.6
BcaC02g12529 Brassica carinata HOM05D011097 ORTHO05D012775 1.4e-20 103.6 116 56.0
BcaC02g12528 Brassica carinata HOM05D011097 ORTHO05D012775 5.6e-17 91.7 104 56.7
C04p01480 Brassica napus HOM05D011097 ORTHO05D012775 9.9e-14 80.9 92 57.6
BcaC02g12527 Brassica carinata HOM05D011097 ORTHO05D012775 1.4e-12 77.0 121 47.1
BolC4t21801H Brassica oleracea HOM05D011097 ORTHO05D012775 1.9e-12 76.6 121 46.3
THA.LOC104817356 Tarenaya hassleriana HOM05D002290 ORTHO05D012775 1.7e-10 70.1 121 38.0
THA.LOC104817352 Tarenaya hassleriana HOM05D002290 ORTHO05D002532 3.9e-10 68.9 108 42.6
THA.LOC104817347 Tarenaya hassleriana HOM05D002290 ORTHO05D002532 6.6e-10 68.2 111 41.4
Carub.0006s2587 Capsella rubella HOM05D011097 ORTHO05D012775 4.3e-09 65.5 96 44.8
THA.LOC104817353 Tarenaya hassleriana HOM05D002290 ORTHO05D002532 9.6e-09 64.3 122 36.9
THA.LOC104817358 Tarenaya hassleriana HOM05D002290 ORTHO05D002532 1.3e-08 63.9 115 31.3
THA.LOC104827625 Tarenaya hassleriana HOM05D002290 ORTHO05D002532 2.4e-07 59.7 114 31.6
Aa31LG1G27790 Aethionema arabicum HOM05D002290 ORTHO05D002532 1.2e-06 57.4 115 31.3
AL4G45780 Arabidopsis lyrata HOM05D002290 ORTHO05D002532 3.4e-06 55.8 117 30.8
BcaB08g36603 Brassica carinata HOM05D011097 ORTHO05D012775 3.4e-06 55.8 48 60.4
Thhalv10001727m.g Eutrema salsugineum HOM05D002290 ORTHO05D002532 3.4e-06 55.8 120 28.3
Carub.0004s2915 Capsella rubella HOM05D002290 ORTHO05D002532 7.6e-06 54.7 117 29.9
HanXRQChr17g0535271 Helianthus annuus HOM05D002290 ORTHO05D002532 7.6e-06 54.7 113 31.9


User provided reference genes

Program Settings