Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 1.0e-151 540.0 268 100.0
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 3.2e-142 508.4 268 94.0
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 1.7e-122 443.0 269 83.6
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 4.6e-120 434.9 269 82.5
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 4.6e-120 434.9 269 82.5
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 4.6e-120 434.9 269 82.5
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 7.8e-120 434.1 269 83.3
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 2.5e-118 429.1 268 83.6
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 5.6e-118 427.9 269 81.8
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 6.2e-117 424.5 269 81.4
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 1.2e-107 393.7 262 79.0
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 2.6e-107 392.5 262 79.0
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 3.5e-104 382.1 270 74.8
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 9.9e-99 364.0 269 72.1
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 1.4e-89 333.6 275 65.8
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 3.5e-88 328.9 278 63.7
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 3.5e-88 328.9 204 80.4
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 3.5e-88 328.9 280 63.9
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 1.0e-87 327.4 277 65.0
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 1.0e-87 327.4 224 74.1
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 1.7e-87 326.6 270 64.8
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 5.1e-87 325.1 283 63.3
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 8.7e-87 324.3 276 64.5
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 1.1e-86 323.9 246 68.3
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 1.1e-86 323.9 246 70.7
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 1.1e-86 323.9 285 61.4
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 1.9e-86 323.2 224 73.7
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 1.9e-86 323.2 202 79.2
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 2.5e-86 322.8 246 67.9
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 3.3e-86 322.4 202 79.2
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 3.3e-86 322.4 281 60.5
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 7.3e-86 321.2 202 77.7
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 1.6e-85 320.1 284 61.6
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.6e-85 320.1 239 71.1
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 2.8e-85 319.3 202 77.2
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 3.6e-85 318.9 204 77.9
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 3.6e-85 318.9 240 70.8
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 3.6e-85 318.9 281 60.9
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 8.1e-85 317.8 232 71.6
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 1.1e-84 317.4 202 77.7
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 1.1e-84 317.4 243 67.1
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 1.1e-84 317.4 228 69.7
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 3.1e-84 315.8 201 77.1
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 4.0e-84 315.5 243 67.1
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 6.9e-84 314.7 272 62.1
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 9.0e-84 314.3 201 76.6
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 1.2e-83 313.9 243 68.7
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 1.5e-83 313.5 202 75.2
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.5e-83 313.5 239 69.5
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 1.5e-83 313.5 189 83.1
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 1.5e-83 313.5 202 76.7
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 2.6e-83 312.8 210 76.2
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.3e-82 310.5 278 61.5
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 1.7e-82 310.1 205 74.1
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 2.9e-82 309.3 268 63.4
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 3.8e-82 308.9 197 75.1
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 3.8e-82 308.9 243 65.4
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 4.9e-82 308.5 242 66.1
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 4.9e-82 308.5 193 78.2
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 6.4e-82 308.1 202 76.2
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 8.4e-82 307.8 220 71.4
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 8.4e-82 307.8 193 78.2
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 1.1e-81 307.4 281 59.1
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 1.1e-81 307.4 249 62.7
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 1.4e-81 307.0 244 64.3
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 1.4e-81 307.0 197 75.1
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 1.9e-81 306.6 242 66.5
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 1.9e-81 306.6 197 75.1
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 2.4e-81 306.2 202 77.2
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 3.2e-81 305.8 210 72.4
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 4.2e-81 305.4 223 68.2
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 5.4e-81 305.1 197 75.6
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 9.3e-81 304.3 298 57.4
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 1.2e-80 303.9 220 70.0
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 6.0e-80 301.6 246 63.0
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 7.9e-80 301.2 307 56.7
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 7.9e-80 301.2 197 74.1
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 3.9e-79 298.9 202 74.8
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 3.9e-79 298.9 201 73.1
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 5.1e-79 298.5 274 59.9
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 8.7e-79 297.7 192 76.0
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 8.7e-79 297.7 197 73.1
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.5e-78 297.0 193 78.2
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 2.5e-78 296.2 192 75.0
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 9.6e-78 294.3 286 57.3
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 2.8e-77 292.7 183 75.4
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 6.2e-77 291.6 187 77.5
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 8.1e-77 291.2 279 58.8
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 8.1e-77 291.2 189 74.6
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 1.8e-76 290.0 192 74.0
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 6.9e-76 288.1 193 73.1
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 7.6e-75 284.6 200 69.5
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 4.9e-74 282.0 187 73.8
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 1.9e-73 280.0 265 57.4
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 3.2e-73 279.3 192 71.9
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 2.1e-72 276.6 196 67.3
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 1.8e-68 263.5 191 70.7
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 4.0e-68 262.3 195 66.2
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 3.0e-63 246.1 235 56.2
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 1.1e-62 244.2 187 64.2
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 3.1e-60 236.1 164 71.3
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 1.3e-58 230.7 187 60.4
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 5.5e-49 198.7 121 77.7
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 1.5e-46 190.7 180 54.4
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 7.0e-44 181.8 103 80.6
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 2.2e-26 123.6 90 70.0
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.8e-23 114.0 81 70.4
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 8.3e-21 105.1 124 46.8
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 2.9e-18 96.7 157 39.5
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 3.6e-16 89.7 152 34.2
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.5e-14 84.3 67 59.7
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 4.5e-11 72.8 87 44.8
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 2.5e-09 67.0 168 31.0
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 1.6e-08 64.3 35 91.4


User provided reference genes

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