Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 7.6e-172 607.1 304 100.0
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 7.9e-169 597.0 305 98.7
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 4.0e-165 584.7 305 96.4
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 5.5e-162 574.3 305 94.4
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 6.0e-161 570.9 305 94.8
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 3.3e-159 565.1 306 91.5
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 3.7e-158 561.6 305 92.5
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 2.4e-157 558.9 305 90.8
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 9.0e-157 557.0 306 90.8
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 9.0e-157 557.0 306 90.8
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 4.5e-156 554.7 306 90.5
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 2.2e-155 552.4 306 89.5
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 4.9e-155 551.2 306 89.5
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 2.0e-143 512.7 304 83.6
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 1.5e-130 469.9 304 77.3
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 3.2e-130 468.8 304 77.0
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 9.4e-130 467.2 304 75.7
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 4.7e-129 464.9 305 77.4
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.0e-128 463.8 304 77.6
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.8e-128 463.0 306 77.1
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 3.9e-128 461.8 304 77.0
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 5.2e-128 461.5 306 74.8
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 6.7e-128 461.1 299 78.3
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 8.8e-128 460.7 306 76.1
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 2.0e-127 459.5 304 77.0
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 3.3e-127 458.8 304 75.3
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 3.3e-127 458.8 304 77.0
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 4.4e-127 458.4 307 73.9
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 1.3e-126 456.8 306 74.2
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 1.3e-126 456.8 304 75.3
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 1.7e-126 456.4 306 75.5
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 4.8e-126 454.9 304 76.0
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 4.8e-126 454.9 304 75.7
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 8.2e-126 454.1 306 73.5
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 8.2e-126 454.1 304 76.3
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 1.1e-125 453.8 306 74.2
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 1.4e-125 453.4 299 75.9
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.8e-125 453.0 306 76.5
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 2.4e-125 452.6 306 75.8
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 2.4e-125 452.6 306 73.5
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 2.4e-125 452.6 299 77.3
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 2.4e-125 452.6 306 73.5
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 3.1e-125 452.2 298 75.8
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 3.1e-125 452.2 306 73.9
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 9.1e-125 450.7 306 73.2
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 2.6e-124 449.1 306 75.8
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 3.5e-124 448.7 306 74.5
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 5.9e-124 448.0 306 74.2
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 7.7e-124 447.6 306 73.9
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 7.7e-124 447.6 306 73.9
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 7.7e-124 447.6 299 74.6
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 2.9e-123 445.7 306 73.5
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.1e-122 443.7 299 74.2
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 3.2e-122 442.2 298 73.8
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.2e-122 441.8 302 73.5
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 4.2e-122 441.8 299 73.9
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 4.2e-122 441.8 306 73.2
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 5.5e-122 441.4 299 74.9
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.2e-122 441.0 306 72.5
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 9.4e-122 440.7 304 73.4
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 1.2e-121 440.3 298 72.8
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 1.2e-121 440.3 304 73.7
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 4.7e-121 438.3 306 71.6
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 6.1e-121 438.0 299 72.9
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 6.1e-121 438.0 299 72.9
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.0e-120 437.2 296 74.3
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 1.4e-120 436.8 306 73.2
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 5.2e-120 434.9 306 72.5
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 5.2e-120 434.9 306 72.5
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 6.8e-120 434.5 306 72.5
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 6.8e-120 434.5 306 72.9
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 2.6e-119 432.6 306 72.2
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 3.4e-119 432.2 306 72.2
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 4.4e-119 431.8 296 73.6
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 7.5e-119 431.0 306 70.6
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 9.7e-119 430.6 284 77.5
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 1.7e-118 429.9 306 72.2
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 6.3e-118 427.9 299 70.9
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 2.4e-117 426.0 299 71.2
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 5.3e-117 424.9 303 71.6
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 1.6e-116 423.3 299 70.9
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 4.7e-113 411.8 291 74.6
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 6.6e-107 391.3 296 65.5
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 3.3e-106 389.0 307 65.1
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 9.5e-106 387.5 300 65.0
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.4e-104 383.6 264 75.4
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 6.8e-104 381.3 304 62.5
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 9.8e-103 377.5 249 78.3
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 1.7e-102 376.7 309 62.8
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 8.3e-102 374.4 306 63.7
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 7.0e-101 371.3 285 66.7
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.7e-97 358.6 305 67.2
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 3.4e-95 352.4 268 67.5
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 1.6e-92 343.6 244 69.7
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 7.3e-90 334.7 306 56.5
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 2.2e-86 323.2 232 69.8
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 1.1e-85 320.9 297 59.6
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 9.2e-85 317.8 273 61.2
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 4.6e-84 315.5 293 56.0
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 2.5e-82 309.7 263 62.0
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 1.5e-79 300.4 299 52.2
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 4.4e-79 298.9 222 68.9
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 2.4e-77 293.1 300 51.0
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.0e-75 286.2 194 73.7
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 8.4e-70 268.1 302 48.3
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 1.9e-69 266.9 202 66.8
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 3.2e-61 239.6 216 61.1
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 4.6e-60 235.7 312 42.0
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 9.3e-53 211.5 123 83.7
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 1.8e-48 197.2 320 39.7
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 1.5e-47 194.1 262 48.9
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.8e-47 192.2 145 69.7
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.6e-47 191.8 145 71.0
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.4e-45 187.6 145 69.0
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 1.4e-45 187.6 301 42.9
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 9.0e-40 168.3 160 51.2
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.5e-39 166.0 145 64.1
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 8.4e-38 161.8 360 31.7
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.3e-34 149.8 91 76.9
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 5.5e-29 132.5 334 30.2
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 1.6e-28 131.0 290 32.1
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.5e-23 114.4 76 72.4
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.9e-14 83.6 43 90.7


User provided reference genes

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