Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 2.5e-122 442.2 237 100.0
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 6.4e-118 427.6 238 96.6
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 6.2e-113 411.0 237 90.7
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 1.1e-112 410.2 237 91.6
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 1.1e-112 410.2 237 91.6
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 1.8e-112 409.5 237 91.6
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 4.0e-112 408.3 237 91.1
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 6.9e-112 407.5 237 90.7
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 1.2e-111 406.8 237 91.1
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 2.6e-111 405.6 237 91.1
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 8.4e-110 400.6 238 89.9
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 1.4e-109 399.8 249 88.8
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 7.1e-109 397.5 240 87.5
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 4.6e-100 368.2 237 81.9
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 8.5e-86 320.9 242 71.5
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 2.7e-84 315.8 243 70.4
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.4e-83 313.5 241 68.5
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 3.9e-83 312.0 237 70.5
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 8.8e-83 310.8 241 68.9
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 2.6e-82 309.3 237 70.0
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 7.4e-82 307.8 245 66.9
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 1.7e-81 306.6 238 69.3
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 2.2e-81 306.2 241 68.0
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 2.2e-81 306.2 238 67.6
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 2.8e-81 305.8 243 70.4
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 4.8e-81 305.1 243 67.1
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 8.2e-81 304.3 242 67.4
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 8.2e-81 304.3 241 68.9
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.1e-80 303.9 242 66.5
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 2.4e-80 302.8 239 67.4
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 3.1e-80 302.4 244 67.2
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 4.1e-80 302.0 244 66.8
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 4.1e-80 302.0 243 70.0
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 4.1e-80 302.0 240 67.9
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 5.3e-80 301.6 243 65.0
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 7.0e-80 301.2 241 66.0
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 7.0e-80 301.2 241 69.3
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 9.1e-80 300.8 242 66.1
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 9.1e-80 300.8 240 67.9
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 1.5e-79 300.1 239 66.9
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 2.0e-79 299.7 235 64.3
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 3.5e-79 298.9 246 65.0
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 3.5e-79 298.9 239 65.3
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 5.9e-79 298.1 243 66.3
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 1.3e-78 297.0 245 64.9
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 1.3e-78 297.0 240 65.8
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 6.5e-78 294.7 244 65.6
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 8.5e-78 294.3 235 64.7
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 1.1e-77 293.9 245 64.5
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 1.5e-77 293.5 223 68.6
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 1.9e-77 293.1 240 65.8
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.5e-77 292.7 241 65.6
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.5e-77 292.7 241 65.6
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 3.2e-77 292.4 238 65.5
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 4.2e-77 292.0 241 66.4
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 5.5e-77 291.6 239 63.6
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 5.5e-77 291.6 238 66.0
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 3.6e-76 288.9 237 62.0
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 3.6e-76 288.9 241 63.5
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 4.7e-76 288.5 250 64.0
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 4.7e-76 288.5 253 62.1
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 6.1e-76 288.1 243 62.1
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 3.0e-75 285.8 242 62.0
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 5.2e-75 285.0 206 71.4
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.1e-74 283.9 240 64.2
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.1e-74 283.9 208 68.3
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 1.1e-74 283.9 228 63.6
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 4.4e-74 282.0 223 65.5
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 4.4e-74 282.0 208 68.3
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 1.7e-73 280.0 247 64.0
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 2.2e-73 279.6 201 72.1
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 2.8e-73 279.3 237 62.0
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 1.8e-72 276.6 218 64.2
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 1.8e-72 276.6 217 65.0
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 3.1e-72 275.8 231 60.6
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 4.1e-72 275.4 217 64.5
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 5.3e-72 275.0 231 60.6
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 7.0e-72 274.6 219 68.9
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 7.0e-72 274.6 214 66.8
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 9.1e-72 274.2 208 65.9
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 1.6e-71 273.5 226 64.6
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 2.0e-71 273.1 204 69.6
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 2.0e-71 273.1 206 67.5
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 1.7e-70 270.0 208 65.9
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 2.9e-70 269.2 242 61.6
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 2.5e-69 266.2 230 61.7
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 6.1e-68 261.5 223 64.1
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 4.1e-64 248.8 238 58.8
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 5.3e-64 248.4 233 58.8
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 2.0e-63 246.5 233 59.2
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 5.9e-63 245.0 190 72.1
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 7.7e-63 244.6 213 61.5
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 2.2e-62 243.0 243 55.6
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 4.8e-57 225.3 246 54.9
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 3.8e-54 215.7 207 53.1
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 5.0e-54 215.3 172 65.7
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 8.6e-54 214.5 207 54.6
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 7.2e-53 211.5 225 52.4
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 2.6e-50 203.0 206 51.5
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 4.3e-45 185.7 227 45.4
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 1.3e-41 174.1 157 62.4
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 4.7e-36 155.6 241 41.5
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 1.5e-34 150.6 114 69.3
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 2.0e-34 150.2 118 70.3
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 2.0e-34 150.2 163 53.4
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.0e-30 137.9 99 71.7
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 2.2e-25 120.2 241 36.5
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 1.2e-18 97.8 79 62.0
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 3.8e-17 92.8 209 33.0
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 8.1e-12 75.1 157 30.6
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 3.1e-11 73.2 59 61.0
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 1.4e-08 64.3 52 63.5
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 3.5e-07 59.7 54 63.0


User provided reference genes

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