Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 1.1e-262 909.4 468 100.0
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 1.8e-252 875.5 470 96.4
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 1.5e-248 862.4 463 96.1
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 4.8e-242 840.9 469 92.5
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 1.7e-239 832.4 469 91.9
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 1.5e-235 819.3 466 89.5
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 2.4e-233 812.0 467 89.1
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 2.2e-231 805.4 469 88.7
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 6.5e-231 803.9 469 88.9
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 6.5e-231 803.9 469 88.9
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 3.6e-229 798.1 492 83.5
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 1.7e-223 779.2 472 86.7
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 8.5e-223 776.9 470 84.3
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 2.3e-196 689.1 457 75.9
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 4.7e-189 664.8 451 74.7
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 8.6e-183 644.0 468 70.9
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 1.4e-180 636.7 467 70.0
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 3.1e-180 635.6 457 69.8
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 5.2e-180 634.8 454 71.1
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 1.3e-178 630.2 459 70.4
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 4.9e-178 628.2 472 68.6
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 9.2e-177 624.0 457 68.1
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 2.7e-176 622.5 455 69.7
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 3.5e-176 622.1 462 69.0
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 3.5e-176 622.1 467 69.2
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 4.6e-176 621.7 462 70.3
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 4.6e-176 621.7 467 68.1
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 4.6e-176 621.7 450 70.4
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 7.8e-176 620.9 459 71.7
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 1.0e-175 620.5 470 68.3
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 1.7e-175 619.8 444 70.5
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 5.1e-175 618.2 467 68.1
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 6.6e-175 617.8 450 70.4
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 8.7e-175 617.5 448 69.2
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 1.5e-174 616.7 446 72.0
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 1.9e-174 616.3 452 70.6
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 3.3e-174 615.5 440 70.9
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 4.3e-174 615.1 459 70.8
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 4.3e-174 615.1 455 69.2
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 4.3e-174 615.1 455 69.5
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 5.6e-174 614.8 455 68.8
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 5.6e-174 614.8 466 68.2
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 7.3e-174 614.4 459 70.8
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 9.6e-174 614.0 468 69.7
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 1.3e-173 613.6 456 68.9
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 2.8e-173 612.5 450 68.4
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 3.6e-173 612.1 447 69.8
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 1.1e-172 610.5 467 67.2
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 1.4e-172 610.1 464 66.6
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 3.1e-172 609.0 467 69.2
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 4.0e-172 608.6 454 68.7
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 1.5e-171 606.7 435 71.3
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 2.0e-171 606.3 461 68.3
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.7e-170 603.2 462 68.8
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 2.2e-170 602.8 447 68.5
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 4.9e-170 601.7 462 68.6
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 2.4e-169 599.4 447 67.8
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 4.2e-169 598.6 466 67.6
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 4.2e-169 598.6 447 67.8
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 7.1e-169 597.8 453 67.8
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 1.2e-168 597.0 457 67.2
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 4.6e-168 595.1 468 64.3
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 1.0e-167 594.0 468 64.3
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 1.7e-167 593.2 468 64.1
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 2.3e-167 592.8 456 68.4
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 1.5e-166 590.1 453 68.0
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 2.1e-165 586.3 493 62.9
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 9.9e-163 577.4 431 68.7
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 1.3e-159 567.0 446 64.1
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 1.3e-159 567.0 457 63.7
CARHR048400 Cardamine hirsuta HOM05D006075 ORTHO05D007527 2.3e-159 566.2 313 93.3
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 5.1e-159 565.1 422 69.7
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 2.5e-158 562.8 468 62.2
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 5.3e-156 555.1 445 62.7
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 9.0e-156 554.3 550 55.8
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 4.2e-153 545.4 448 63.4
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 1.6e-152 543.5 438 64.4
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 1.3e-151 540.4 411 68.6
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 6.7e-151 538.1 464 61.6
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 1.4e-148 530.4 447 60.6
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 1.4e-148 530.4 437 64.3
CARHR013020 Cardamine hirsuta HOM05D006075 ORTHO05D007527 4.5e-147 525.4 363 73.8
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 3.8e-146 522.3 517 56.9
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 5.7e-142 508.4 471 55.4
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 6.9e-140 501.5 455 58.9
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 1.6e-136 490.3 460 59.3
TAR629G3145 Trochodendron aralioides HOM05D006075 ORTHO05D007527 3.9e-135 485.7 370 65.9
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 1.8e-132 476.9 454 58.4
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 2.0e-131 473.4 474 57.2
FAN08G0114 Fragaria x ananassa HOM05D006075 ORTHO05D007527 3.4e-131 472.6 403 64.3
FAN13G2280 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.0e-130 471.1 386 65.0
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 4.2e-129 465.7 514 54.3
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 4.7e-128 462.2 450 57.3
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 4.4e-126 455.7 455 55.4
TAR629G0535 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.7e-122 443.7 366 62.8
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 1.5e-121 440.7 484 52.5
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 3.3e-118 429.5 448 53.6
PSO478G1113 Papaver somniferum HOM05D006075 ORTHO05D007527 7.4e-118 428.3 318 68.2
Sc01g0008740 Simmondsia chinensis HOM05D006075 ORTHO05D007527 9.7e-118 427.9 358 64.0
ATR0322G053 Amborella trichopoda HOM05D006075 ORTHO05D007527 4.0e-111 406.0 330 62.1
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 2.0e-110 403.7 444 51.4
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 7.5e-110 401.7 476 47.9
Glyma.05G049100 Glycine max HOM05D006075 ORTHO05D007527 4.8e-109 399.1 340 63.5
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 1.4e-108 397.5 471 47.8
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 1.4e-100 370.9 436 50.2
Haze_08940 Corylus avellana HOM05D006075 ORTHO05D007527 2.0e-99 367.1 267 69.3
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 1.9e-97 360.5 481 44.9
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 2.3e-95 353.6 460 47.8
Sed0016840 Sechium edule HOM05D006075 ORTHO05D007527 1.3e-93 347.8 263 66.9
Zm00001eb251050 Zea mays HOM05D006075 ORTHO05D007527 1.4e-92 344.4 305 56.7
Cpa.g.sc74.79 Carica papaya HOM05D006075 ORTHO05D007527 1.9e-81 307.4 294 57.5
AagrBONN_evm.TU.Sc2ySwM_117.1004 Anthoceros agrestis HOM05D006075 ORTHO05D007527 3.1e-79 300.1 364 48.1
Dinv39003 Davidia involucrata HOM05D006075 ORTHO05D007527 6.2e-72 275.8 284 55.3
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 4.0e-63 246.5 756 28.4
Os01g0870201 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 6.4e-61 239.2 451 35.9
Ca_20251_v3 Cicer arietinum L. HOM05D006075 ORTHO05D007527 1.3e-56 224.9 160 69.4
CSS0009197 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 8.1e-56 222.2 418 38.3
AUR62017286 Chenopodium quinoa HOM05D006075 ORTHO05D007527 1.9e-41 174.5 175 58.3
TAR636G1294 Trochodendron aralioides HOM05D006075 ORTHO05D007527 5.6e-41 172.9 157 57.3
C09p15950 Brassica napus HOM05D006075 ORTHO05D007527 1.6e-40 171.4 99 83.8
BolC9t54506H Brassica oleracea HOM05D006075 ORTHO05D007527 1.3e-34 151.8 116 69.8
MCO15G123 Micromonas commoda HOM05D006075 ORTHO05D007527 1.3e-34 151.8 448 28.3
AUR62010644 Chenopodium quinoa HOM05D006075 ORTHO05D007527 1.1e-31 142.1 179 47.5
PRCOL_00005762 Prasinoderma coloniale HOM05D006075 ORTHO05D007527 1.1e-25 122.1 518 26.3
ATR0322G060 Amborella trichopoda HOM05D006075 ORTHO05D007527 3.3e-25 120.6 95 66.3
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 7.4e-25 119.4 108 61.1
TAR636G2798 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.3e-24 118.6 67 80.6
Cre03.g150400 Chlamydomonas reinhardtii HOM05D006075 ORTHO05D007527 4.1e-15 87.0 213 33.8
Actinidia27405 Actinidia chinensis HOM05D006075 ORTHO05D007527 6.7e-10 69.7 64 57.8
Pp3c15_22645 Physcomitrium patens HOM05D006075 ORTHO05D007527 3.3e-09 67.4 114 42.1
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 9.1e-07 59.3 37 67.6


User provided reference genes

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