Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.6e-121 437.6 212 100.0
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.6e-82 307.8 160 91.9
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 6.4e-77 291.2 156 90.4
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 1.5e-65 253.4 157 79.6
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 2.1e-64 249.6 157 79.0
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 4.3e-49 198.7 177 56.5
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 1.4e-47 193.7 182 54.9
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 5.3e-47 191.8 158 58.2
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 1.0e-45 187.6 160 58.1
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.4e-44 183.7 177 50.8
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 4.2e-44 182.2 160 56.2
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 2.1e-43 179.9 185 51.9
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 2.7e-43 179.5 158 57.6
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 1.8e-42 176.8 161 55.3
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 1.8e-42 176.8 161 55.3
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.3e-42 176.4 155 54.8
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 2.3e-42 176.4 161 55.3
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.5e-41 173.7 160 58.1
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.7e-40 169.1 170 52.9
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 2.0e-38 163.3 156 53.8
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 3.5e-38 162.5 158 52.5
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 2.2e-37 159.8 158 51.3
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 3.8e-37 159.1 192 45.8
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.5e-36 157.1 171 49.1
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 4.2e-36 155.6 159 50.3
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.0e-34 151.0 149 51.7
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.0e-34 151.0 160 50.6
CARHR048270 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.0e-34 149.4 156 50.0
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.7e-33 145.2 140 52.1
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 7.5e-33 144.8 151 50.3
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-29 133.3 114 57.9
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 5.0e-29 132.1 154 42.9
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.7e-27 126.3 162 46.9
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 6.1e-27 125.2 158 41.1
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 1.0e-26 124.4 142 44.4
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 3.0e-26 122.9 117 56.4
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 8.8e-26 121.3 121 52.9
Carub.0002s0164 Capsella rubella HOM05D007210 ORTHO05D006152 1.2e-25 120.9 74 78.4
C04p12630 Brassica napus HOM05D007210 ORTHO05D006152 1.5e-25 120.6 156 42.9
BolC4t22912H Brassica oleracea HOM05D007210 ORTHO05D006152 1.5e-25 120.6 156 42.9
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 2.6e-25 119.8 115 53.0
BcaC02g11660 Brassica carinata HOM05D007210 ORTHO05D006152 7.5e-25 118.2 156 42.3
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 2.0e-22 110.2 176 39.2
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 2.0e-22 110.2 176 39.2
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 1.0e-21 107.8 153 38.6
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 1.0e-21 107.8 153 40.5
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 5.0e-21 105.5 161 37.9
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 6.5e-21 105.1 161 38.5
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 8.5e-21 104.8 103 51.5
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 1.9e-20 103.6 151 39.1
Thhalv10023805m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 3.2e-20 102.8 131 45.8
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 4.2e-20 102.4 139 42.4
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 9.4e-20 101.3 153 37.9
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.2e-19 100.9 157 39.5
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 1.6e-19 100.5 153 37.9
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 2.1e-19 100.1 140 40.7
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 2.1e-19 100.1 153 37.9
BolC8t51626H Brassica oleracea HOM05D007210 ORTHO05D006152 2.7e-19 99.8 111 45.9
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.7e-19 99.0 92 52.2
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 8.0e-19 98.2 157 38.9
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 5.2e-18 95.5 162 37.0
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 6.8e-18 95.1 149 36.9
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.6e-17 93.2 162 37.7
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 4.4e-17 92.4 158 37.3
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 4.4e-17 92.4 158 37.3
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 5.7e-17 92.0 153 35.3
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 9.8e-17 91.3 153 35.3
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 9.8e-17 91.3 153 35.3
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 9.8e-17 91.3 149 36.2
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 1.7e-16 90.5 153 34.6
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 4.9e-16 89.0 137 37.2
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 8.3e-16 88.2 137 38.7
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-15 87.8 153 34.0
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-15 87.8 153 34.0
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-15 87.8 153 36.6
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 1.8e-15 87.0 137 36.5
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 2.4e-15 86.7 128 39.1
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 5.4e-15 85.5 161 34.8
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 5.4e-15 85.5 161 34.8
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 1.2e-14 84.3 139 36.0
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.2e-14 84.3 135 37.8
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 3.5e-14 82.8 150 34.7
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 5.9e-14 82.0 123 37.4
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 7.7e-14 81.6 131 36.6
BcaB07g31391 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-13 80.9 141 37.6
BolC5t30124H Brassica oleracea HOM05D007210 ORTHO05D006152 1.7e-13 80.5 146 32.9
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 2.3e-13 80.1 123 37.4
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 6.6e-13 78.6 108 38.0
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 6.6e-13 78.6 108 38.0
C05p13910 Brassica napus HOM05D007210 ORTHO05D006152 1.1e-12 77.8 146 32.2
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 1.5e-12 77.4 103 38.8
THA.LOC104809659 Tarenaya hassleriana HOM05D007210 ORTHO05D006152 1.5e-12 77.4 117 38.5
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 1.9e-12 77.0 123 37.4
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 1.9e-12 77.0 123 37.4
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 3.3e-12 76.3 142 36.6
Thhalv10024042m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 5.6e-12 75.5 152 36.2
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 9.5e-12 74.7 129 36.4
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 2.1e-11 73.6 129 36.4
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 2.8e-11 73.2 120 35.8
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 2.8e-11 73.2 112 36.6
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 2.8e-11 73.2 127 35.4
CARHR048280 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.8e-11 73.2 86 43.0
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 3.6e-11 72.8 123 35.8
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 3.6e-11 72.8 112 38.4
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 6.1e-11 72.0 112 36.6
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 6.1e-11 72.0 112 36.6
BcaB05g21588 Brassica carinata HOM05D008885 ORTHO05D006152 8.0e-11 71.6 127 36.2
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 1.4e-10 70.9 111 35.1
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 1.4e-10 70.9 140 37.1
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 1.4e-10 70.9 140 37.1
BcaB05g21732 Brassica carinata HOM05D008885 ORTHO05D006152 1.8e-10 70.5 127 35.4
BcaB05g21733 Brassica carinata HOM05D008885 ORTHO05D006152 1.8e-10 70.5 127 35.4
BraA02t04832Z Brassica rapa HOM05D008885 ORTHO05D006152 1.8e-10 70.5 114 35.1
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 3.0e-10 69.7 110 38.2
BcaC03g13143 Brassica carinata HOM05D008885 ORTHO05D006152 5.2e-10 68.9 133 35.3
C02p02150 Brassica napus HOM05D008885 ORTHO05D006152 5.2e-10 68.9 133 35.3
BolC2t06184H Brassica oleracea HOM05D008885 ORTHO05D006152 5.2e-10 68.9 133 35.3
BolC2t06185H Brassica oleracea HOM05D008885 ORTHO05D006152 6.8e-10 68.6 133 35.3
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 2.0e-09 67.0 161 35.4
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 4.4e-09 65.9 112 35.7
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-08 64.3 153 29.4
Carub.0006s0396 Capsella rubella HOM05D008885 ORTHO05D006152 1.3e-08 64.3 144 34.0
Thhalv10015529m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 2.2e-08 63.5 154 33.8
AT1G50690 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 8.3e-08 61.6 156 34.6
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.4e-07 60.1 135 29.6
Thhalv10015607m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 3.2e-07 59.7 128 33.6
BcaB05g21589 Brassica carinata HOM05D008885 ORTHO05D006152 9.2e-07 58.2 152 28.3
CARHR040780 Cardamine hirsuta HOM05D008885 ORTHO05D006152 1.2e-06 57.8 131 29.8
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.0e-06 57.0 135 34.8
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 2.0e-06 57.0 119 34.5
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 2.7e-06 56.6 119 36.1
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 5.9e-06 55.5 123 35.0
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.8e-06 55.1 110 33.6
DCAR_008845 Daucus carota HOM05D014660 ORTHO05D016977 7.8e-06 55.1 55 45.5
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 7.8e-06 55.1 123 35.0


User provided reference genes

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