Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G12290 Arabidopsis lyrata HOM05D022147 ORTHO05D011862 5.2e-136 487.6 237 100.0
AL4G33840 Arabidopsis lyrata HOM05D022147 ORTHO05D011862 6.8e-51 204.9 236 47.5
CARHR284450 Cardamine hirsuta HOM05D022147 ORTHO05D011862 2.0e-42 176.8 144 66.0
AL2G12210 Arabidopsis lyrata HOM05D022147 ORTHO05D011862 2.6e-34 149.8 250 38.0
A10p14240 Brassica napus HOM05D000069 ORTHO05D011862 8.6e-22 108.2 211 32.2
BraA10t43515Z Brassica rapa HOM05D000069 ORTHO05D011862 8.6e-22 108.2 211 32.2
CARHR048300 Cardamine hirsuta HOM05D012115 ORTHO05D011862 1.1e-21 107.8 231 33.8
Carub.0002s0172 Capsella rubella HOM05D012115 ORTHO05D011862 9.6e-21 104.8 234 32.5
AL2G12310 Arabidopsis lyrata HOM05D012115 ORTHO05D011862 1.2e-20 104.4 230 31.3
Sp2g01380 Schrenkiella parvula HOM05D012115 ORTHO05D011862 2.1e-20 103.6 247 30.8
Sp2g01350 Schrenkiella parvula HOM05D022147 ORTHO05D011862 2.8e-20 103.2 219 32.0
A03p13070 Brassica napus HOM05D000069 ORTHO05D011862 1.3e-17 94.4 228 29.4
BraA03t10617Z Brassica rapa HOM05D000069 ORTHO05D011862 1.3e-17 94.4 228 29.4
C03p15290 Brassica napus HOM05D000069 ORTHO05D011862 6.4e-17 92.0 228 28.9
BcaC01g06455 Brassica carinata HOM05D000069 ORTHO05D011862 4.2e-16 89.4 234 28.6
C05p13920 Brassica napus HOM05D012115 ORTHO05D021850 8.1e-12 75.1 236 30.1
AL5G33890 Arabidopsis lyrata HOM05D012115 ORTHO05D011862 7.6e-10 68.6 193 31.1
Duzib093G1919 Durio zibethinus HOM05D000069 ORTHO05D000060 4.6e-07 59.3 210 26.2
Sp1g08480 Schrenkiella parvula HOM05D000069 ORTHO05D000060 4.6e-07 59.3 205 26.8
Manes.18G019400 Manihot esculenta HOM05D000069 ORTHO05D000060 6.0e-07 58.9 211 27.0
PSO675G1739 Papaver somniferum HOM05D000069 ORTHO05D000060 6.0e-07 58.9 204 27.0
AT1G09850 Arabidopsis thaliana HOM05D000069 ORTHO05D000060 1.0e-06 58.2 205 26.8
Carub.0001s0923 Capsella rubella HOM05D000069 ORTHO05D000060 1.0e-06 58.2 205 26.8
C05p07960 Brassica napus HOM05D000069 ORTHO05D000060 1.3e-06 57.8 205 26.8
Lj4A32T60 Lonicera japonica HOM05D000069 ORTHO05D000060 1.3e-06 57.8 205 26.8
AUR62034543 Chenopodium quinoa HOM05D000069 ORTHO05D000060 1.7e-06 57.4 220 25.9
PSO541G0896 Papaver somniferum HOM05D000069 ORTHO05D000060 1.7e-06 57.4 204 26.5
Potri.005G232900 Populus trichocarpa HOM05D000069 ORTHO05D000060 1.7e-06 57.4 203 26.6
Sopen12g030570 Solanum pennellii HOM05D000069 ORTHO05D000060 1.7e-06 57.4 213 24.9
CiPaw.07G155700 Carya illinoinensis HOM05D000069 ORTHO05D000060 2.3e-06 57.0 219 26.9
Lj1g0010708 Lotus japonicus HOM05D000069 ORTHO05D000060 2.3e-06 57.0 200 27.0
Solyc12g088670.2 Solanum lycopersicum HOM05D000069 ORTHO05D000060 2.3e-06 57.0 213 24.9
Aqoxy5G01519 Aquilegia oxysepala HOM05D000069 ORTHO05D000060 3.0e-06 56.6 203 25.1
Potri.009G098100 Populus trichocarpa HOM05D000069 ORTHO05D000060 3.0e-06 56.6 215 26.0
TAR376G1181 Trochodendron aralioides HOM05D000069 ORTHO05D000060 3.0e-06 56.6 205 27.3
Prupe.1G372500 Prunus persica HOM05D000069 ORTHO05D000060 3.9e-06 56.2 220 29.1
AL1G20450 Arabidopsis lyrata HOM05D000069 ORTHO05D000060 5.1e-06 55.8 205 26.8
AT5G05050 Arabidopsis thaliana HOM05D031351 ORTHO05D011862 5.1e-06 55.8 158 26.6
BolC5t29548H Brassica oleracea HOM05D000069 ORTHO05D000060 5.1e-06 55.8 205 26.3
Thhalv10007640m.g Eutrema salsugineum HOM05D000069 ORTHO05D000060 5.1e-06 55.8 205 26.3
A06p06560 Brassica napus HOM05D000069 ORTHO05D000060 6.6e-06 55.5 205 26.3
MD08G1023300 Malus domestica HOM05D000069 ORTHO05D000060 8.7e-06 55.1 221 28.1
SMO171G0045 Selaginella moellendorffii HOM05D000069 ORTHO05D000060 8.7e-06 55.1 229 26.6
SMO353G0145 Selaginella moellendorffii HOM05D000069 ORTHO05D000060 8.7e-06 55.1 229 26.6
HPP92_014145 Vanilla planifolia HOM05D000069 ORTHO05D000060 8.7e-06 55.1 204 27.9


User provided reference genes

Program Settings