Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.6e-85 317.8 153 100.0
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 5.7e-43 177.9 150 58.7
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 3.5e-40 168.7 146 58.9
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 3.5e-40 168.7 146 58.9
Thhalv10024042m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 7.3e-38 161.0 178 49.4
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 9.5e-38 160.6 132 59.8
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 1.0e-36 157.1 146 56.2
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 5.2e-36 154.8 149 49.7
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 2.9e-34 149.1 149 49.7
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 4.1e-33 145.2 146 50.0
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 5.4e-33 144.8 142 50.7
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 5.4e-33 144.8 142 50.7
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.5e-32 142.1 146 53.4
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 9.5e-30 134.0 142 48.6
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.0e-28 130.6 141 51.1
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.2e-28 128.3 141 49.6
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.5e-27 126.7 128 53.1
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 7.5e-27 124.4 143 48.3
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.4e-26 121.3 121 52.9
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 6.4e-26 121.3 154 45.5
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 6.4e-26 121.3 148 45.9
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 8.3e-26 120.9 120 51.7
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 8.3e-26 120.9 124 48.4
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 9.2e-25 117.5 125 49.6
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.2e-24 117.1 143 46.9
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.5e-24 115.5 95 58.9
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 3.5e-24 115.5 116 53.4
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 1.7e-23 113.2 143 41.3
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.9e-23 112.1 121 49.6
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 6.6e-23 111.3 125 44.0
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.1e-22 110.5 131 43.5
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 4.3e-22 108.6 116 49.1
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 9.5e-22 107.5 129 47.3
BcaB07g31391 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-21 107.1 104 48.1
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.6e-21 106.7 120 49.2
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 2.1e-21 106.3 112 48.2
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.6e-21 105.5 148 41.9
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 8.1e-21 104.4 120 46.7
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 8.1e-21 104.4 125 45.6
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 2.3e-20 102.8 120 45.0
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 3.1e-20 102.4 113 47.8
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 4.0e-20 102.1 127 46.5
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 4.0e-20 102.1 135 41.5
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 4.0e-20 102.1 113 47.8
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 6.8e-20 101.3 125 43.2
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 1.5e-19 100.1 98 53.1
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 1.5e-19 100.1 98 53.1
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.0e-19 99.8 122 41.8
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 2.0e-19 99.8 124 41.9
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 2.0e-19 99.8 120 44.2
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 2.0e-19 99.8 120 44.2
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 5.8e-19 98.2 126 42.1
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 9.8e-19 97.4 99 49.5
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 1.7e-18 96.7 148 39.2
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 1.7e-18 96.7 120 43.3
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 3.7e-18 95.5 125 43.2
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 3.7e-18 95.5 147 38.1
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 3.7e-18 95.5 147 38.1
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-17 94.0 132 42.4
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 5.4e-17 91.7 122 41.0
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 9.2e-17 90.9 96 52.1
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 1.2e-16 90.5 122 41.0
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 1.2e-16 90.5 122 41.0
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 3.5e-16 89.0 126 39.7
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 3.5e-16 89.0 126 39.7
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 7.8e-16 87.8 122 40.2
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 7.8e-16 87.8 122 40.2
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 1.3e-15 87.0 126 38.9
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 3.9e-15 85.5 126 38.1
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 3.9e-15 85.5 126 38.1
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 5.1e-15 85.1 110 40.9
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 5.1e-15 85.1 98 45.9
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 5.1e-15 85.1 99 46.5
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 8.6e-15 84.3 147 37.4
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 8.6e-15 84.3 147 37.4
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-14 84.0 120 40.0
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 1.5e-14 83.6 147 36.7
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 1.9e-14 83.2 95 46.3
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 2.5e-14 82.8 126 40.5
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 7.3e-14 81.3 117 37.6
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.6e-13 80.1 145 34.5
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.6e-13 80.1 145 35.2
BolC8t51626H Brassica oleracea HOM05D007210 ORTHO05D006152 1.6e-13 80.1 95 44.2
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 2.1e-13 79.7 126 38.9
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 2.1e-13 79.7 126 38.9
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 2.1e-13 79.7 152 36.2
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 4.7e-13 78.6 147 35.4
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 8.1e-13 77.8 130 35.4
BcaB05g21732 Brassica carinata HOM05D008885 ORTHO05D006152 1.1e-12 77.4 126 38.9
BcaB05g21733 Brassica carinata HOM05D008885 ORTHO05D006152 1.1e-12 77.4 126 38.9
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 1.8e-12 76.6 101 44.6
BcaB05g21588 Brassica carinata HOM05D008885 ORTHO05D006152 2.3e-12 76.3 126 38.9
BolC2t06185H Brassica oleracea HOM05D008885 ORTHO05D006152 2.3e-12 76.3 126 37.3
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 3.1e-12 75.9 124 38.7
BcaB05g21731 Brassica carinata HOM05D008885 ORTHO05D006152 1.5e-11 73.6 95 37.9
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 1.5e-11 73.6 141 34.8
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 1.5e-11 73.6 96 38.5
BcaC03g13143 Brassica carinata HOM05D008885 ORTHO05D006152 2.6e-11 72.8 126 35.7
C02p02150 Brassica napus HOM05D008885 ORTHO05D006152 2.6e-11 72.8 126 35.7
BolC2t06184H Brassica oleracea HOM05D008885 ORTHO05D006152 2.6e-11 72.8 126 35.7
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 2.6e-11 72.8 116 37.9
CARHR048270 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.6e-11 72.8 90 40.0
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 4.4e-11 72.0 113 36.3
C09p18860 Brassica napus HOM05D007210 ORTHO05D006152 4.4e-11 72.0 142 34.5
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 4.4e-11 72.0 113 36.3
BraA02t04832Z Brassica rapa HOM05D008885 ORTHO05D006152 4.4e-11 72.0 127 37.0
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 5.8e-11 71.6 110 35.5
AL6G14830 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 7.6e-11 71.2 111 37.8
C04p12630 Brassica napus HOM05D007210 ORTHO05D006152 7.6e-11 71.2 112 37.5
BolC4t22912H Brassica oleracea HOM05D007210 ORTHO05D006152 7.6e-11 71.2 112 37.5
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 1.3e-10 70.5 101 38.6
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-10 69.7 145 34.5
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 3.8e-10 68.9 116 37.1
C05p13910 Brassica napus HOM05D007210 ORTHO05D006152 4.9e-10 68.6 119 32.8
BolC5t30124H Brassica oleracea HOM05D007210 ORTHO05D006152 4.9e-10 68.6 119 32.8
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 8.4e-10 67.8 133 31.6
THA.LOC104809659 Tarenaya hassleriana HOM05D007210 ORTHO05D006152 1.4e-09 67.0 102 39.2
Thhalv10015607m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 2.4e-09 66.2 122 34.4
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 3.2e-09 65.9 99 40.4
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 5.4e-09 65.1 99 38.4
BcaC02g11660 Brassica carinata HOM05D007210 ORTHO05D006152 2.1e-08 63.2 112 36.6
CARHR208210 Cardamine hirsuta HOM05D008885 ORTHO05D006152 2.7e-08 62.8 105 36.2
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.5e-08 62.4 119 32.8
AT1G50690 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 7.8e-08 61.2 111 37.8
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-07 60.5 113 34.5
BcaB05g21589 Brassica carinata HOM05D008885 ORTHO05D006152 3.9e-07 58.9 150 28.7
Carub.0006s0396 Capsella rubella HOM05D008885 ORTHO05D006152 1.1e-06 57.4 90 35.6
Thhalv10023805m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.1e-06 57.4 64 48.4
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 1.5e-06 57.0 105 36.2
Carub.0002s0164 Capsella rubella HOM05D007210 ORTHO05D006152 2.5e-06 56.2 51 56.9
CARHR040780 Cardamine hirsuta HOM05D008885 ORTHO05D006152 4.3e-06 55.5 107 29.9
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 5.6e-06 55.1 117 32.5


User provided reference genes

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