Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.4e-107 392.1 193 100.0
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.6e-82 309.7 178 84.3
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 6.3e-71 271.2 175 76.0
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 3.1e-54 215.7 142 73.2
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 4.0e-49 198.7 158 61.4
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.0e-48 196.4 171 57.3
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 6.3e-47 191.4 172 57.0
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 2.7e-45 186.0 158 56.3
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 6.5e-44 181.4 164 55.5
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 9.4e-43 177.6 155 54.8
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-38 164.1 160 52.5
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 1.8e-38 163.3 174 50.0
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 3.1e-38 162.5 160 51.9
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 1.7e-36 156.8 162 53.7
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 3.8e-36 155.6 142 50.7
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 8.6e-36 154.5 149 51.7
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.1e-35 154.1 144 52.1
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-35 154.1 144 54.2
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.5e-35 153.7 142 59.2
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 7.2e-35 151.4 146 52.7
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.6e-34 150.2 145 50.3
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 2.1e-34 149.8 142 51.4
CARHR048270 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.6e-34 149.1 148 53.4
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 6.1e-34 148.3 150 50.7
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 6.1e-34 148.3 150 50.7
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 4.0e-33 145.6 144 51.4
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.9e-31 138.7 149 47.0
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 6.3e-31 138.3 180 42.8
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.8e-30 136.7 153 46.4
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.8e-30 136.7 154 47.4
BolC4t22912H Brassica oleracea HOM05D007210 ORTHO05D006152 3.2e-30 136.0 163 46.6
C04p12630 Brassica napus HOM05D007210 ORTHO05D006152 4.1e-30 135.6 174 45.4
BcaC02g11660 Brassica carinata HOM05D007210 ORTHO05D006152 1.5e-27 127.1 163 44.8
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 1.6e-26 123.6 144 43.1
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 6.1e-26 121.7 139 43.2
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 5.2e-25 118.6 117 52.1
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 1.5e-24 117.1 144 41.7
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 3.4e-24 115.9 118 50.8
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.2e-22 109.4 145 42.8
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 9.2e-22 107.8 116 50.0
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 1.6e-21 107.1 122 43.4
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 2.7e-21 106.3 122 44.3
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 3.0e-20 102.8 148 40.5
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.9e-19 100.1 122 41.8
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.3e-19 99.4 107 44.9
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 3.3e-19 99.4 138 38.4
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 3.3e-19 99.4 159 37.1
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 3.3e-19 99.4 159 37.1
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 7.3e-19 98.2 187 35.8
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 9.5e-19 97.8 136 42.6
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 1.6e-18 97.1 148 37.8
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 2.8e-18 96.3 147 40.8
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 8.1e-18 94.7 137 40.9
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 1.8e-17 93.6 142 39.4
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 1.8e-17 93.6 142 39.4
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.8e-17 93.6 157 38.2
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 1.5e-16 90.5 126 41.3
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 1.5e-16 90.5 143 37.1
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 2.0e-16 90.1 142 38.7
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 2.0e-16 90.1 142 38.7
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 2.0e-16 90.1 147 35.4
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 2.6e-16 89.7 137 38.7
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.4e-16 89.4 144 36.8
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.4e-16 89.0 94 47.9
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 5.8e-16 88.6 157 36.3
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 7.5e-16 88.2 153 34.6
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 9.8e-16 87.8 133 39.8
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 9.8e-16 87.8 133 39.8
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 2.2e-15 86.7 176 33.5
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 3.7e-15 85.9 157 37.6
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 3.7e-15 85.9 153 34.6
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 4.9e-15 85.5 145 35.9
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 4.9e-15 85.5 145 35.9
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 8.3e-15 84.7 155 35.5
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 1.4e-14 84.0 157 35.7
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 1.4e-14 84.0 157 35.7
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 1.4e-14 84.0 154 35.1
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 1.9e-14 83.6 134 35.1
Thhalv10023805m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.9e-14 83.6 111 37.8
CARHR048280 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.2e-13 80.9 141 34.0
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 2.1e-13 80.1 141 33.3
C05p13910 Brassica napus HOM05D007210 ORTHO05D006152 2.1e-13 80.1 148 33.1
THA.LOC104809659 Tarenaya hassleriana HOM05D007210 ORTHO05D006152 2.1e-13 80.1 117 40.2
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 3.5e-13 79.3 119 38.7
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 3.5e-13 79.3 126 40.5
BolC8t51626H Brassica oleracea HOM05D007210 ORTHO05D006152 4.6e-13 79.0 92 42.4
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 1.3e-12 77.4 111 36.9
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 1.3e-12 77.4 111 36.9
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.3e-12 76.6 142 35.9
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 2.3e-12 76.6 131 35.9
BolC5t30124H Brassica oleracea HOM05D007210 ORTHO05D006152 2.3e-12 76.6 148 32.4
BcaB07g31391 Brassica carinata HOM05D007210 ORTHO05D006152 3.0e-12 76.3 129 36.4
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 3.0e-12 76.3 139 34.5
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 3.0e-12 76.3 135 38.5
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 3.0e-12 76.3 139 34.5
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 6.6e-12 75.1 131 35.1
BcaB05g21732 Brassica carinata HOM05D008885 ORTHO05D006152 6.6e-12 75.1 135 39.3
BcaB05g21733 Brassica carinata HOM05D008885 ORTHO05D006152 6.6e-12 75.1 135 39.3
BcaC03g13143 Brassica carinata HOM05D008885 ORTHO05D006152 1.9e-11 73.6 128 37.5
C02p02150 Brassica napus HOM05D008885 ORTHO05D006152 1.9e-11 73.6 128 37.5
BolC2t06184H Brassica oleracea HOM05D008885 ORTHO05D006152 1.9e-11 73.6 128 37.5
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 5.6e-11 72.0 113 38.9
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 5.6e-11 72.0 113 38.9
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 5.6e-11 72.0 135 37.0
BcaB05g21588 Brassica carinata HOM05D008885 ORTHO05D006152 7.3e-11 71.6 135 37.8
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 7.3e-11 71.6 139 33.1
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 9.5e-11 71.2 152 31.6
BolC2t06185H Brassica oleracea HOM05D008885 ORTHO05D006152 9.5e-11 71.2 113 38.1
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 9.5e-11 71.2 141 34.0
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 1.2e-10 70.9 127 35.4
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 1.6e-10 70.5 104 35.6
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 3.6e-10 69.3 126 35.7
BraA02t04832Z Brassica rapa HOM05D008885 ORTHO05D006152 3.6e-10 69.3 108 38.9
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 6.2e-10 68.6 127 34.6
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 6.2e-10 68.6 132 34.1
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 8.1e-10 68.2 126 35.7
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 8.1e-10 68.2 126 35.7
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-09 67.8 150 31.3
Thhalv10015607m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 1.4e-09 67.4 140 36.4
AL6G14830 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 3.1e-09 66.2 110 36.4
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 3.1e-09 66.2 147 31.3
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 4.0e-09 65.9 114 35.1
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 4.0e-09 65.9 127 37.0
CARHR208210 Cardamine hirsuta HOM05D008885 ORTHO05D006152 5.2e-09 65.5 110 30.9
Carub.0002s0164 Capsella rubella HOM05D007210 ORTHO05D006152 8.9e-09 64.7 54 51.9
Thhalv10024042m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 8.9e-09 64.7 154 33.8
BcaB05g21731 Brassica carinata HOM05D008885 ORTHO05D006152 4.4e-08 62.4 111 36.0
Carub.0007s2602 Capsella rubella HOM05D008242 ORTHO05D012602 7.6e-08 61.6 111 35.1
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 9.9e-08 61.2 123 34.1
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 9.9e-08 61.2 120 31.7
BcaB05g21589 Brassica carinata HOM05D008885 ORTHO05D006152 1.7e-07 60.5 166 27.7
Sp2g01340 Schrenkiella parvula HOM05D007210 ORTHO05D006152 3.7e-07 59.3 45 60.0
Thhalv10015529m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 1.4e-06 57.4 115 33.9
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 9.2e-06 54.7 137 34.3


User provided reference genes

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