Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.1e-107 393.3 188 100.0
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.1e-83 313.5 188 78.2
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.0e-81 307.0 189 76.7
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.1e-72 276.9 176 71.6
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 1.4e-62 243.4 174 70.1
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 2.5e-56 222.6 176 61.4
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 5.2e-54 214.9 177 59.3
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 1.1e-51 207.2 181 55.8
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 2.7e-50 202.6 119 81.5
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 4.3e-48 195.3 172 54.7
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.6e-48 194.9 177 55.9
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 4.9e-44 181.8 176 51.1
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 3.2e-43 179.1 172 52.3
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 9.2e-43 177.6 167 52.1
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 9.2e-43 177.6 167 52.1
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 1.6e-42 176.8 181 52.5
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 1.6e-42 176.8 178 52.2
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 2.7e-42 176.0 168 50.6
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.7e-42 176.0 169 49.7
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 4.6e-42 175.3 172 51.2
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 6.0e-42 174.9 168 54.8
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 7.8e-42 174.5 174 50.6
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 8.6e-41 171.0 168 50.6
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.1e-40 170.6 170 52.9
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 2.8e-39 166.0 205 43.9
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 3.6e-39 165.6 186 46.2
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.4e-38 163.7 173 53.8
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 5.2e-38 161.8 198 43.4
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 8.3e-36 154.5 144 52.1
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.9e-33 145.6 159 47.8
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.5e-32 142.9 151 48.3
CARHR048270 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.5e-32 142.9 176 42.0
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 1.6e-31 140.2 155 47.1
Thhalv10023805m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 2.8e-31 139.4 133 53.4
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 1.8e-30 136.7 186 41.9
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.1e-30 136.0 149 49.7
C04p12630 Brassica napus HOM05D007210 ORTHO05D006152 5.2e-30 135.2 180 44.4
BolC4t22912H Brassica oleracea HOM05D007210 ORTHO05D006152 5.2e-30 135.2 180 44.4
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 4.4e-29 132.1 118 55.9
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.8e-29 131.7 180 40.6
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 5.8e-29 131.7 177 41.8
BcaC02g11660 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-28 130.6 186 42.5
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 2.2e-28 129.8 172 43.0
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-27 127.5 172 41.3
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 7.1e-27 124.8 173 39.9
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 9.2e-27 124.4 186 39.2
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 2.7e-26 122.9 117 51.3
BolC8t51626H Brassica oleracea HOM05D007210 ORTHO05D006152 1.7e-25 120.2 132 43.9
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.7e-25 120.2 155 41.9
CARHR048280 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.0e-25 119.4 186 37.6
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 8.6e-25 117.9 125 49.6
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 1.5e-24 117.1 161 42.2
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 1.9e-24 116.7 151 41.1
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 1.6e-23 113.6 154 42.9
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 2.1e-23 113.2 149 41.6
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.8e-23 112.8 150 42.0
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 6.2e-23 111.7 145 43.4
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 6.2e-23 111.7 141 42.6
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 8.1e-23 111.3 185 35.7
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 8.1e-23 111.3 185 35.7
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 1.1e-22 110.9 163 38.7
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 3.1e-22 109.4 184 35.3
Carub.0002s0164 Capsella rubella HOM05D007210 ORTHO05D006152 3.1e-22 109.4 91 58.2
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 4.0e-22 109.0 153 40.5
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 4.0e-22 109.0 153 40.5
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.9e-22 108.2 103 51.5
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 9.0e-22 107.8 160 37.5
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 9.0e-22 107.8 160 38.1
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 1.2e-21 107.5 145 38.6
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 3.4e-21 105.9 160 36.9
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 4.4e-21 105.5 141 41.8
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 4.4e-21 105.5 149 40.3
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 7.6e-21 104.8 148 39.2
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 7.6e-21 104.8 136 41.9
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 7.6e-21 104.8 148 39.2
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 9.9e-21 104.4 175 37.1
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 9.9e-21 104.4 179 36.3
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-20 104.0 176 35.8
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 1.7e-20 103.6 170 37.6
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 4.9e-20 102.1 147 39.5
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 4.9e-20 102.1 147 39.5
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 8.4e-20 101.3 153 39.2
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 1.4e-19 100.5 147 40.8
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 2.4e-19 99.8 130 43.8
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 9.3e-19 97.8 145 38.6
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 9.3e-19 97.8 145 38.6
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 1.2e-18 97.4 147 37.4
BraA02t04832Z Brassica rapa HOM05D008885 ORTHO05D006152 2.1e-18 96.7 155 38.1
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 2.1e-18 96.7 126 43.7
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 6.0e-18 95.1 126 41.3
BcaC03g13143 Brassica carinata HOM05D008885 ORTHO05D006152 7.8e-18 94.7 154 39.6
C02p02150 Brassica napus HOM05D008885 ORTHO05D006152 7.8e-18 94.7 154 39.6
BolC2t06184H Brassica oleracea HOM05D008885 ORTHO05D006152 7.8e-18 94.7 154 39.6
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 1.0e-17 94.4 141 36.9
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-17 94.0 162 37.7
C05p13910 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-17 94.0 149 38.3
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 1.7e-17 93.6 154 38.3
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 1.7e-17 93.6 155 34.8
BcaB05g21732 Brassica carinata HOM05D008885 ORTHO05D006152 2.3e-17 93.2 154 38.3
BcaB05g21733 Brassica carinata HOM05D008885 ORTHO05D006152 2.3e-17 93.2 154 38.3
BcaB07g31391 Brassica carinata HOM05D007210 ORTHO05D006152 2.3e-17 93.2 137 38.7
Thhalv10015607m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 2.3e-17 93.2 155 39.4
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 3.0e-17 92.8 130 40.8
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 3.0e-17 92.8 126 38.9
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 3.0e-17 92.8 186 32.8
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 3.9e-17 92.4 194 33.5
AL6G14830 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 5.1e-17 92.0 123 41.5
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-16 90.9 132 38.6
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 1.5e-16 90.5 143 40.6
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 1.5e-16 90.5 143 40.6
BolC5t30124H Brassica oleracea HOM05D007210 ORTHO05D006152 1.5e-16 90.5 149 37.6
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 2.5e-16 89.7 126 42.1
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 2.5e-16 89.7 132 38.6
BcaB05g21588 Brassica carinata HOM05D008885 ORTHO05D006152 3.3e-16 89.4 143 39.2
BolC2t06185H Brassica oleracea HOM05D008885 ORTHO05D006152 3.3e-16 89.4 154 38.3
THA.LOC104809659 Tarenaya hassleriana HOM05D007210 ORTHO05D006152 4.3e-16 89.0 115 42.6
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 1.3e-15 87.4 127 40.2
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 1.3e-15 87.4 126 41.3
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 1.6e-15 87.0 127 40.2
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 1.6e-15 87.0 127 40.2
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 3.6e-15 85.9 130 40.0
BcaB05g21731 Brassica carinata HOM05D008885 ORTHO05D006152 4.8e-15 85.5 112 41.1
Thhalv10024042m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.8e-14 83.6 181 36.5
Thhalv10015529m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 2.4e-14 83.2 113 42.5
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 3.1e-14 82.8 127 38.6
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.5e-13 80.5 137 33.6
Carub.0006s0396 Capsella rubella HOM05D008885 ORTHO05D006152 3.4e-13 79.3 131 37.4
CARHR040780 Cardamine hirsuta HOM05D008885 ORTHO05D006152 4.5e-13 79.0 109 37.6
AT1G50690 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 9.9e-13 77.8 132 37.1
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 9.9e-13 77.8 133 36.8
BcaB05g21589 Brassica carinata HOM05D008885 ORTHO05D006152 1.7e-12 77.0 164 32.9
C04p29420 Brassica napus HOM05D007210 ORTHO05D006152 8.4e-12 74.7 197 28.4
BolC4t24471H Brassica oleracea HOM05D007210 ORTHO05D006152 1.9e-11 73.6 189 29.1
Sp2g01340 Schrenkiella parvula HOM05D007210 ORTHO05D006152 2.4e-11 73.2 57 61.4
CARHR208210 Cardamine hirsuta HOM05D008885 ORTHO05D006152 4.2e-11 72.4 138 35.5
CARHR040800 Cardamine hirsuta HOM05D008885 ORTHO05D006152 9.3e-11 71.2 76 44.7
AL7G39700 Arabidopsis lyrata HOM05D008242 ORTHO05D012602 1.2e-10 70.9 125 36.8
BcaB08g36045 Brassica carinata HOM05D007210 ORTHO05D006152 1.6e-10 70.5 136 33.1
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.5e-10 69.3 128 33.6
Carub.0007s2602 Capsella rubella HOM05D008242 ORTHO05D012602 8.7e-09 64.7 110 31.8
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 8.7e-09 64.7 115 40.9
C03p15280 Brassica napus HOM05D008242 ORTHO05D010974 4.3e-08 62.4 117 31.6
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 4.3e-08 62.4 121 35.5
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 7.4e-08 61.6 121 34.7
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 1.6e-07 60.5 132 31.1
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 2.8e-07 59.7 135 31.9
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 6.2e-07 58.5 140 30.7
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 1.1e-06 57.8 121 33.9
Rhsim12G0199500 Rhododendron simsii HOM05D000727 ORTHO05D000541 1.1e-06 57.8 127 30.7
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.1e-06 57.8 137 32.8
Rhsim06G0172100 Rhododendron simsii HOM05D000032 ORTHO05D009914 1.8e-06 57.0 157 30.6
Rhsim12G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.4e-06 56.6 146 30.1
C09p18860 Brassica napus HOM05D007210 ORTHO05D006152 3.1e-06 56.2 157 31.2
Peaxi162Scf00555g00913 Petunia axillaris HOM05D008744 ORTHO05D010647 4.0e-06 55.8 167 29.9
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 5.3e-06 55.5 140 29.3
Peaxi162Scf00000g00013 Petunia axillaris HOM05D008744 ORTHO05D010647 5.3e-06 55.5 121 32.2
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 6.9e-06 55.1 136 29.4
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 6.9e-06 55.1 136 33.1


User provided reference genes

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