Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.7e-110 400.6 189 100.0
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.4e-99 366.3 190 90.5
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.3e-84 314.3 188 78.2
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 8.9e-70 267.3 180 68.9
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 1.6e-55 219.9 176 64.2
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 1.2e-50 203.8 174 57.5
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 1.6e-47 193.4 175 53.1
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 1.6e-47 193.4 185 51.9
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 2.2e-44 183.0 186 49.5
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 2.9e-44 182.6 175 50.9
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.9e-44 181.8 174 52.3
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 5.4e-43 178.3 119 72.3
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 7.1e-43 177.9 182 50.5
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 4.6e-42 175.3 187 46.5
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 7.8e-42 174.5 182 49.5
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.9e-40 169.9 169 49.1
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.9e-40 169.9 171 48.0
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 2.1e-39 166.4 181 47.0
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 2.8e-39 166.0 167 49.1
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 2.8e-39 166.0 167 49.1
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 1.4e-38 163.7 179 47.5
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 1.8e-38 163.3 188 43.1
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 6.9e-38 161.4 170 51.2
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.6e-37 159.5 171 49.1
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 2.9e-36 156.0 187 46.0
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-35 154.1 176 44.9
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 1.1e-35 154.1 214 40.7
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 2.4e-35 152.9 175 47.4
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.2e-34 150.6 145 50.3
CARHR048270 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.3e-32 142.5 177 42.4
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.0e-30 135.6 162 46.3
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 5.3e-30 135.2 156 48.1
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.5e-29 133.7 161 46.0
Thhalv10023805m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 4.5e-29 132.1 135 51.1
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 1.7e-28 130.2 159 43.4
C04p12630 Brassica napus HOM05D007210 ORTHO05D006152 2.2e-28 129.8 187 40.6
BolC4t22912H Brassica oleracea HOM05D007210 ORTHO05D006152 2.2e-28 129.8 187 40.6
BcaC02g11660 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-27 127.5 190 40.5
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 1.8e-25 120.2 185 39.5
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 3.0e-25 119.4 151 45.0
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 3.9e-25 119.0 119 51.3
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 1.1e-24 117.5 119 50.4
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 1.9e-24 116.7 159 44.0
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 1.9e-24 116.7 178 39.9
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.5e-24 116.3 189 36.5
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 2.5e-24 116.3 180 39.4
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 3.3e-24 115.9 188 36.2
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 4.3e-24 115.5 150 46.0
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 5.6e-24 115.2 167 40.7
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 5.6e-24 115.2 167 40.7
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 9.6e-24 114.4 167 40.1
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-23 114.0 194 38.7
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-23 114.0 194 38.7
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 6.2e-23 111.7 169 37.9
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 8.1e-23 111.3 159 40.9
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 8.1e-23 111.3 186 39.8
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 8.1e-23 111.3 186 39.8
CARHR048280 Cardamine hirsuta HOM05D007210 ORTHO05D006152 8.1e-23 111.3 187 36.4
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.1e-22 110.9 155 41.9
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 1.4e-22 110.5 179 39.7
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 1.4e-22 110.5 186 39.8
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.8e-22 110.2 161 40.4
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.0e-22 109.0 129 47.3
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 4.0e-22 109.0 150 45.3
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 5.3e-22 108.6 173 35.8
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 1.2e-21 107.5 155 43.2
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 1.5e-21 107.1 154 39.6
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 1.5e-21 107.1 151 39.7
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 1.5e-21 107.1 138 44.2
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 1.5e-21 107.1 154 39.6
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 2.0e-21 106.7 189 37.0
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 7.6e-21 104.8 153 37.3
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 2.2e-20 103.2 171 36.8
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 2.2e-20 103.2 169 37.9
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 2.2e-20 103.2 183 37.2
BolC8t51626H Brassica oleracea HOM05D007210 ORTHO05D006152 6.4e-20 101.7 129 39.5
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 8.4e-20 101.3 192 35.4
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 1.1e-19 100.9 151 39.7
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-19 100.9 154 38.3
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 1.4e-19 100.5 156 39.1
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 2.5e-19 99.8 145 40.0
Carub.0002s0164 Capsella rubella HOM05D007210 ORTHO05D006152 4.2e-19 99.0 84 52.4
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 5.5e-19 98.6 194 35.6
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 1.2e-18 97.4 135 41.5
BcaB07g31391 Brassica carinata HOM05D007210 ORTHO05D006152 4.6e-18 95.5 133 43.6
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 1.0e-17 94.4 171 35.1
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 2.3e-17 93.2 132 39.4
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 2.3e-17 93.2 134 38.1
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 2.3e-17 93.2 134 38.1
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.0e-17 92.8 104 46.2
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 7.4e-16 88.2 158 32.3
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-15 87.4 156 37.2
C05p13910 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-15 87.4 150 36.7
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 1.3e-15 87.4 156 37.2
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 4.8e-15 85.5 156 35.3
Thhalv10024042m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 4.8e-15 85.5 181 35.9
BraA02t04832Z Brassica rapa HOM05D008885 ORTHO05D006152 6.2e-15 85.1 157 35.7
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 8.2e-15 84.7 132 35.6
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 8.2e-15 84.7 128 38.3
BolC5t30124H Brassica oleracea HOM05D007210 ORTHO05D006152 1.4e-14 84.0 150 36.0
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 1.8e-14 83.6 156 35.9
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 1.8e-14 83.6 130 39.2
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 4.0e-14 82.4 128 35.9
BcaB05g21732 Brassica carinata HOM05D008885 ORTHO05D006152 5.3e-14 82.0 156 35.3
BcaB05g21733 Brassica carinata HOM05D008885 ORTHO05D006152 5.3e-14 82.0 156 35.3
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 6.9e-14 81.6 156 35.3
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 6.9e-14 81.6 116 38.8
BcaC03g13143 Brassica carinata HOM05D008885 ORTHO05D006152 9.0e-14 81.3 156 35.9
C02p02150 Brassica napus HOM05D008885 ORTHO05D006152 9.0e-14 81.3 156 35.9
BolC2t06184H Brassica oleracea HOM05D008885 ORTHO05D006152 9.0e-14 81.3 156 35.9
THA.LOC104809659 Tarenaya hassleriana HOM05D007210 ORTHO05D006152 9.0e-14 81.3 115 40.9
AL6G14830 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 1.5e-13 80.5 125 36.8
Thhalv10015607m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 2.0e-13 80.1 157 35.0
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 2.6e-13 79.7 145 36.6
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 2.6e-13 79.7 145 36.6
BolC2t06185H Brassica oleracea HOM05D008885 ORTHO05D006152 2.6e-13 79.7 156 35.3
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 2.6e-13 79.7 145 35.9
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 2.6e-13 79.7 129 35.7
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 5.8e-13 78.6 145 35.9
CARHR208210 Cardamine hirsuta HOM05D008885 ORTHO05D006152 7.6e-13 78.2 139 35.3
BcaB05g21588 Brassica carinata HOM05D008885 ORTHO05D006152 1.7e-12 77.0 145 35.2
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.2e-12 76.6 139 34.5
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 8.4e-12 74.7 131 36.6
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 2.5e-11 73.2 131 35.9
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 2.5e-11 73.2 131 35.9
BcaB05g21731 Brassica carinata HOM05D008885 ORTHO05D006152 4.2e-11 72.4 114 36.0
Thhalv10015529m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 1.6e-10 70.5 130 33.8
Sp2g01340 Schrenkiella parvula HOM05D007210 ORTHO05D006152 2.1e-10 70.1 59 55.9
C03p15280 Brassica napus HOM05D008242 ORTHO05D010974 6.1e-10 68.6 122 33.6
CARHR040780 Cardamine hirsuta HOM05D008885 ORTHO05D006152 3.9e-09 65.9 132 29.5
CARHR040800 Cardamine hirsuta HOM05D008885 ORTHO05D006152 5.1e-09 65.5 67 43.3
Sopen03g027820 Solanum pennellii HOM05D008744 ORTHO05D010647 8.7e-09 64.7 126 31.7
Solyc03g097080.4 Solanum lycopersicum HOM05D008744 ORTHO05D010647 1.9e-08 63.5 126 31.0
BcaB05g21589 Brassica carinata HOM05D008885 ORTHO05D006152 2.5e-08 63.2 85 43.5
BcaB08g36045 Brassica carinata HOM05D007210 ORTHO05D006152 3.3e-08 62.8 138 32.6
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 4.3e-08 62.4 129 30.2
BolC4t24471H Brassica oleracea HOM05D007210 ORTHO05D006152 5.7e-08 62.0 187 25.1
AT1G50690 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.3e-07 60.8 134 32.8
C04p29420 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-07 60.8 171 25.1
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.3e-07 60.8 130 30.0
PGSC0003DMG400012275 Solanum tuberosum HOM05D008744 ORTHO05D010647 1.6e-07 60.5 126 33.3
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 8.2e-07 58.2 120 37.5
BcaB08g36118 Brassica carinata HOM05D004201 ORTHO05D009648 2.4e-06 56.6 140 27.9
C09p18860 Brassica napus HOM05D007210 ORTHO05D006152 2.4e-06 56.6 157 29.9
Peaxi162Scf00555g00913 Petunia axillaris HOM05D008744 ORTHO05D010647 9.0e-06 54.7 170 29.4


User provided reference genes

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