Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.4e-109 397.9 190 100.0
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.5e-104 382.9 190 95.8
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 6.0e-82 307.8 195 79.5
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 6.0e-42 174.9 147 55.1
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 2.3e-41 172.9 143 56.6
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 1.9e-40 169.9 148 53.4
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.3e-40 169.1 145 55.2
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 1.3e-36 157.1 164 52.4
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.9e-36 156.0 149 51.7
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 1.4e-35 153.7 151 51.0
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 9.3e-35 151.0 171 45.0
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.6e-34 148.7 159 47.8
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 3.0e-33 146.0 183 42.6
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 1.1e-32 144.1 172 43.0
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-32 144.1 172 43.0
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.7e-32 141.7 149 47.0
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 7.4e-32 141.4 181 42.0
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 7.4e-32 141.4 171 42.1
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 7.4e-32 141.4 150 50.7
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 2.8e-31 139.4 148 46.6
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 2.8e-31 139.4 147 48.3
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 6.3e-31 138.3 147 47.6
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 8.2e-31 137.9 162 46.3
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.4e-30 137.1 134 53.0
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 2.4e-30 136.3 158 45.6
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.4e-30 136.3 159 43.4
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 3.1e-30 136.0 146 45.9
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.3e-30 135.2 149 47.7
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 1.2e-29 134.0 138 47.8
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 2.0e-29 133.3 147 46.9
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 2.6e-29 132.9 151 43.0
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 3.4e-29 132.5 137 49.6
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 3.4e-29 132.5 137 49.6
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.0e-28 131.0 141 49.6
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.7e-28 130.2 154 46.1
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-28 129.8 173 42.8
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 2.2e-28 129.8 117 56.4
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 6.5e-28 128.3 145 44.1
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.1e-27 127.5 155 41.9
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 1.6e-26 123.6 175 41.7
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 4.6e-26 122.1 164 42.7
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 6.1e-26 121.7 137 47.4
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 5.1e-25 118.6 147 42.9
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 5.1e-25 118.6 143 43.4
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-24 117.5 167 40.7
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 1.1e-24 117.5 167 40.7
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 4.3e-24 115.5 164 40.9
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 7.4e-24 114.8 151 41.1
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 1.6e-23 113.6 144 44.4
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 2.8e-23 112.8 117 49.6
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 2.8e-23 112.8 149 38.9
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 2.8e-23 112.8 149 38.9
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 2.8e-23 112.8 162 40.7
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 2.8e-23 112.8 147 41.5
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 2.8e-23 112.8 147 41.5
C04p12630 Brassica napus HOM05D007210 ORTHO05D006152 6.3e-23 111.7 148 40.5
BolC4t22912H Brassica oleracea HOM05D007210 ORTHO05D006152 6.3e-23 111.7 148 40.5
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 8.2e-23 111.3 149 39.6
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 1.8e-22 110.2 149 37.6
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 2.4e-22 109.8 149 38.3
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 2.4e-22 109.8 149 38.3
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 4.1e-22 109.0 143 39.2
CARHR048270 Cardamine hirsuta HOM05D007210 ORTHO05D006152 4.1e-22 109.0 151 37.1
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 5.3e-22 108.6 132 43.2
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 9.0e-22 107.8 150 37.3
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 9.0e-22 107.8 115 48.7
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 1.5e-21 107.1 142 40.1
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 1.5e-21 107.1 149 37.6
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.5e-21 107.1 169 34.9
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 2.6e-21 106.3 142 38.7
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 2.6e-21 106.3 142 38.7
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 7.7e-21 104.8 136 39.7
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-20 104.0 140 38.6
Thhalv10024042m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.7e-20 103.6 173 38.2
BcaC02g11660 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-19 100.9 150 38.7
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 7.2e-19 98.2 106 43.4
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 2.7e-18 96.3 176 33.0
Thhalv10023805m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 3.6e-18 95.9 112 45.5
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 4.6e-18 95.5 136 39.0
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 4.6e-18 95.5 136 39.0
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 2.3e-17 93.2 140 38.6
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 3.9e-17 92.4 142 38.0
BcaB07g31391 Brassica carinata HOM05D007210 ORTHO05D006152 5.1e-17 92.0 134 38.1
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 5.1e-17 92.0 136 36.8
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 8.8e-17 91.3 136 37.5
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 2.5e-16 89.7 136 37.5
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 4.3e-16 89.0 121 41.3
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 1.3e-15 87.4 155 33.5
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-15 86.7 179 33.5
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 2.8e-15 86.3 136 35.3
THA.LOC104809659 Tarenaya hassleriana HOM05D007210 ORTHO05D006152 2.8e-15 86.3 120 40.0
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 6.3e-15 85.1 106 39.6
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 1.4e-14 84.0 111 37.8
C05p13910 Brassica napus HOM05D007210 ORTHO05D006152 9.1e-14 81.3 142 32.4
CARHR048280 Cardamine hirsuta HOM05D007210 ORTHO05D006152 9.1e-14 81.3 68 52.9
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 3.4e-13 79.3 149 32.2
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 5.9e-13 78.6 117 38.5
BolC5t30124H Brassica oleracea HOM05D007210 ORTHO05D006152 1.0e-12 77.8 142 31.7
BolC8t51626H Brassica oleracea HOM05D007210 ORTHO05D006152 1.0e-12 77.8 96 41.7
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.1e-11 74.3 139 32.4
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 1.4e-11 73.9 116 36.2
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 1.9e-11 73.6 116 39.7
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 3.2e-11 72.8 115 33.9
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 3.2e-11 72.8 116 35.3
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 3.2e-11 72.8 116 35.3
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 4.2e-11 72.4 148 29.7
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 5.5e-11 72.0 116 38.8
Sp2g01340 Schrenkiella parvula HOM05D007210 ORTHO05D006152 9.4e-11 71.2 49 63.3
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 1.6e-10 70.5 112 35.7
BcaB05g21731 Brassica carinata HOM05D008885 ORTHO05D006152 2.1e-10 70.1 115 33.0
BcaC03g13143 Brassica carinata HOM05D008885 ORTHO05D006152 2.1e-10 70.1 112 34.8
C02p02150 Brassica napus HOM05D008885 ORTHO05D006152 2.1e-10 70.1 112 34.8
BolC2t06184H Brassica oleracea HOM05D008885 ORTHO05D006152 2.1e-10 70.1 112 34.8
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 2.1e-10 70.1 118 39.0
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 2.1e-10 70.1 122 36.1
BolC2t06185H Brassica oleracea HOM05D008885 ORTHO05D006152 2.7e-10 69.7 112 35.7
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 2.7e-10 69.7 130 31.5
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 3.6e-10 69.3 106 34.0
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 4.7e-10 68.9 122 36.1
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 1.4e-09 67.4 112 35.7
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 1.4e-09 67.4 112 35.7
Carub.0007s2602 Capsella rubella HOM05D008242 ORTHO05D012602 1.4e-09 67.4 130 33.1
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 8.8e-09 64.7 122 35.2
C03p15280 Brassica napus HOM05D008242 ORTHO05D010974 2.6e-08 63.2 120 30.8
CARHR040780 Cardamine hirsuta HOM05D008885 ORTHO05D006152 3.3e-08 62.8 106 33.0
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.3e-07 60.8 143 27.3
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 2.8e-07 59.7 77 40.3
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.8e-07 59.7 135 31.9
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 3.7e-07 59.3 127 27.6
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 3.7e-07 59.3 129 30.2
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 4.8e-07 58.9 85 42.4
BcaB05g21589 Brassica carinata HOM05D008885 ORTHO05D006152 6.3e-07 58.5 146 28.1
CARHR040800 Cardamine hirsuta HOM05D008885 ORTHO05D006152 8.2e-07 58.2 81 39.5
Rhsim07G0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.1e-06 57.8 129 29.5
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-06 57.4 132 33.3
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 2.4e-06 56.6 127 27.6
C04p29420 Brassica napus HOM05D007210 ORTHO05D006152 3.1e-06 56.2 124 29.8
BolC4t24471H Brassica oleracea HOM05D007210 ORTHO05D006152 3.1e-06 56.2 124 29.8
BcaB08g36045 Brassica carinata HOM05D007210 ORTHO05D006152 4.1e-06 55.8 115 33.0
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 5.3e-06 55.5 136 31.6


User provided reference genes

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