Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.0e-110 401.7 190 100.0
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 6.5e-105 384.0 190 95.8
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.7e-84 316.2 195 81.0
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 2.3e-41 172.9 147 55.1
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.3e-40 169.1 143 55.2
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 9.6e-40 167.5 145 54.5
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 1.6e-39 166.8 147 53.1
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 1.5e-37 160.2 164 53.0
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-36 156.4 171 46.2
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 9.3e-35 151.0 151 51.0
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.2e-34 150.6 140 52.1
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 3.5e-34 149.1 171 44.4
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 3.5e-34 149.1 171 44.4
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.9e-33 145.6 151 48.3
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 3.9e-33 145.6 188 43.1
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 1.9e-32 143.3 151 51.0
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 2.5e-32 142.9 185 42.2
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 2.5e-32 142.9 170 42.9
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 7.4e-32 141.4 153 46.4
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 7.4e-32 141.4 149 47.7
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-31 140.6 148 49.3
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 2.8e-31 139.4 148 48.6
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.4e-30 137.1 158 46.2
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.8e-30 136.7 161 46.0
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 3.1e-30 136.0 134 52.2
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 5.3e-30 135.2 149 47.7
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 6.9e-30 134.8 150 48.7
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 6.9e-30 134.8 150 48.7
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 6.9e-30 134.8 146 45.9
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 9.0e-30 134.4 159 42.8
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.2e-29 134.0 141 51.1
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 3.4e-29 132.5 172 43.0
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 5.9e-29 131.7 138 47.1
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 5.9e-29 131.7 117 56.4
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.0e-28 131.0 149 46.3
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.0e-28 131.0 161 44.7
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.0e-28 131.0 151 42.4
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.4e-27 127.1 154 41.6
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 7.2e-27 124.8 145 42.8
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 1.2e-26 124.0 139 48.2
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 7.9e-26 121.3 167 40.7
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 7.9e-26 121.3 167 40.7
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 2.3e-25 119.8 164 40.9
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 6.7e-25 118.2 164 41.5
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 1.1e-24 117.5 167 41.9
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 1.9e-24 116.7 162 40.7
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 4.3e-24 115.5 147 41.5
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 2.2e-23 113.2 143 40.6
C04p12630 Brassica napus HOM05D007210 ORTHO05D006152 2.2e-23 113.2 149 41.6
BolC4t22912H Brassica oleracea HOM05D007210 ORTHO05D006152 2.2e-23 113.2 149 41.6
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 2.2e-23 113.2 143 40.6
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 3.7e-23 112.5 135 43.7
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 6.3e-23 111.7 151 39.7
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 6.3e-23 111.7 150 41.3
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 8.2e-23 111.3 138 42.0
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 1.4e-22 110.5 143 39.9
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 1.4e-22 110.5 143 39.2
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 1.8e-22 110.2 143 39.9
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 1.8e-22 110.2 117 48.7
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 1.8e-22 110.2 143 39.9
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 2.4e-22 109.8 144 43.1
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 4.1e-22 109.0 147 40.1
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 5.3e-22 108.6 142 40.8
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 5.3e-22 108.6 132 43.9
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 6.9e-22 108.2 144 38.9
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 1.5e-21 107.1 143 39.2
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 1.5e-21 107.1 115 47.8
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 2.0e-21 106.7 136 40.4
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 2.0e-21 106.7 136 40.4
CARHR048270 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.0e-21 106.7 151 36.4
Thhalv10024042m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 2.0e-21 106.7 173 38.7
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 2.6e-21 106.3 136 40.4
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 4.5e-21 105.5 140 39.3
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.3e-20 104.0 163 35.0
BcaC02g11660 Brassica carinata HOM05D007210 ORTHO05D006152 3.8e-20 102.4 151 39.7
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 3.2e-19 99.4 136 39.7
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 3.2e-19 99.4 136 39.7
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 9.4e-19 97.8 106 43.4
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 9.4e-19 97.8 176 33.5
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 2.7e-18 96.3 140 39.3
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 4.6e-18 95.5 142 38.7
Thhalv10023805m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 7.9e-18 94.7 112 44.6
BcaB07g31391 Brassica carinata HOM05D007210 ORTHO05D006152 1.0e-17 94.4 126 39.7
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 1.4e-17 94.0 136 38.2
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 3.0e-17 92.8 144 34.7
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 3.9e-17 92.4 144 35.4
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 3.3e-16 89.4 121 40.5
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 7.4e-16 88.2 155 32.9
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 1.3e-15 87.4 119 37.8
THA.LOC104809659 Tarenaya hassleriana HOM05D007210 ORTHO05D006152 1.3e-15 87.4 120 40.0
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 1.7e-15 87.0 179 33.0
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 4.8e-15 85.5 136 36.0
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 8.2e-15 84.7 111 36.9
C05p13910 Brassica napus HOM05D007210 ORTHO05D006152 2.4e-14 83.2 142 32.4
CARHR048280 Cardamine hirsuta HOM05D007210 ORTHO05D006152 6.9e-14 81.6 68 52.9
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 2.6e-13 79.7 143 33.6
BolC5t30124H Brassica oleracea HOM05D007210 ORTHO05D006152 2.6e-13 79.7 142 31.7
BolC8t51626H Brassica oleracea HOM05D007210 ORTHO05D006152 7.7e-13 78.2 107 40.2
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.8e-12 75.9 139 33.1
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 3.8e-12 75.9 117 37.6
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 2.5e-11 73.2 116 40.5
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 7.2e-11 71.6 116 35.3
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 7.2e-11 71.6 148 29.7
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 9.4e-11 71.2 115 33.0
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 9.4e-11 71.2 116 39.7
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 1.6e-10 70.5 116 34.5
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 1.6e-10 70.5 116 34.5
Carub.0007s2602 Capsella rubella HOM05D008242 ORTHO05D012602 2.1e-10 70.1 130 33.8
BcaB05g21731 Brassica carinata HOM05D008885 ORTHO05D006152 6.1e-10 68.6 115 32.2
Sp2g01340 Schrenkiella parvula HOM05D007210 ORTHO05D006152 7.9e-10 68.2 49 61.2
BcaC03g13143 Brassica carinata HOM05D008885 ORTHO05D006152 1.0e-09 67.8 112 33.9
C02p02150 Brassica napus HOM05D008885 ORTHO05D006152 1.0e-09 67.8 112 33.9
BolC2t06184H Brassica oleracea HOM05D008885 ORTHO05D006152 1.0e-09 67.8 112 33.9
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 1.4e-09 67.4 112 34.8
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 1.8e-09 67.0 106 33.0
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 1.8e-09 67.0 130 30.8
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 1.8e-09 67.0 122 35.2
BolC2t06185H Brassica oleracea HOM05D008885 ORTHO05D006152 2.3e-09 66.6 112 34.8
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 2.3e-09 66.6 118 38.1
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 3.9e-09 65.9 122 35.2
C03p15280 Brassica napus HOM05D008242 ORTHO05D010974 8.8e-09 64.7 120 31.7
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 1.1e-08 64.3 112 34.8
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 1.1e-08 64.3 112 34.8
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 1.5e-08 63.9 122 36.1
C09p18860 Brassica napus HOM05D007210 ORTHO05D006152 5.7e-08 62.0 167 29.9
CARHR040780 Cardamine hirsuta HOM05D008885 ORTHO05D006152 1.3e-07 60.8 106 32.1
Rhsim07G0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.3e-07 60.8 129 30.2
BcaB08g36045 Brassica carinata HOM05D007210 ORTHO05D006152 3.7e-07 59.3 115 33.9
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 3.7e-07 59.3 127 28.3
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 3.7e-07 59.3 129 31.0
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 4.8e-07 58.9 143 25.9
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 6.3e-07 58.5 135 31.9
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-06 57.8 132 34.1
BolC4t24471H Brassica oleracea HOM05D007210 ORTHO05D006152 1.8e-06 57.0 137 28.5
BcaB05g21589 Brassica carinata HOM05D008885 ORTHO05D006152 2.4e-06 56.6 146 27.4
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 2.4e-06 56.6 127 28.3
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 2.4e-06 56.6 85 40.0
C04p29420 Brassica napus HOM05D007210 ORTHO05D006152 3.1e-06 56.2 124 29.8
CARHR040800 Cardamine hirsuta HOM05D008885 ORTHO05D006152 3.1e-06 56.2 81 38.3
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 3.1e-06 56.2 77 39.0
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 4.1e-06 55.8 136 32.4
CSS0008468 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.3e-06 55.5 92 34.8
Rhsim04G0228800 Rhododendron simsii HOM05D009663 ORTHO05D011812 9.1e-06 54.7 132 29.5


User provided reference genes

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