Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G12040 Arabidopsis lyrata HOM05D012020 ORTHO05D013949 0.0e+00 1077.4 552 100.0
AT1G63240 Arabidopsis thaliana HOM05D012020 ORTHO05D013949 2.1e-268 928.7 552 87.3
AL2G12140 Arabidopsis lyrata HOM05D012020 ORTHO05D013949 1.3e-265 919.5 553 87.3
Carub.0002s0160 Capsella rubella HOM05D012020 ORTHO05D013949 1.1e-200 703.7 544 72.1
Sp2g01310 Schrenkiella parvula HOM05D012020 ORTHO05D013949 8.6e-190 667.5 565 66.2
Thhalv10023394m.g Eutrema salsugineum HOM05D012020 ORTHO05D013949 3.9e-182 642.1 563 64.3
BcaC04g22478 Brassica carinata HOM05D012020 ORTHO05D013949 9.0e-131 471.5 570 54.0
BolC9t54786H Brassica oleracea HOM05D012020 ORTHO05D013949 9.0e-131 471.5 570 54.0
C09p18840 Brassica napus HOM05D012020 ORTHO05D013949 5.9e-130 468.8 570 53.9
A09p15590 Brassica napus HOM05D012020 ORTHO05D013949 3.8e-129 466.1 571 54.6
BraA09t37199Z Brassica rapa HOM05D012020 ORTHO05D013949 1.1e-128 464.5 573 54.5
CARHR048180 Cardamine hirsuta HOM05D012020 ORTHO05D013949 2.5e-128 463.4 556 54.1
BcaB07g31393 Brassica carinata HOM05D012020 ORTHO05D013949 2.6e-122 443.4 563 53.6
Aa31LG2G680 Aethionema arabicum HOM05D012020 ORTHO05D013949 1.0e-81 308.5 541 42.1
THA.LOC104809412 Tarenaya hassleriana HOM05D012020 ORTHO05D013949 5.1e-49 199.9 637 32.2
MD06G1076800 Malus domestica HOM05D003520 ORTHO05D003332 1.3e-07 62.4 126 36.5
COL.COLO4_34422 Corchorus olitorius HOM05D003520 ORTHO05D003332 3.7e-07 60.8 120 34.2
MD14G1098200 Malus domestica HOM05D003520 ORTHO05D003332 3.1e-06 57.8 126 34.9
FvH4_5g01860 Fragaria vesca HOM05D003520 ORTHO05D003332 6.9e-06 56.6 153 29.4
RcHm_v2.0_Chr7g0198661 Rosa chinensis HOM05D003520 ORTHO05D003332 6.9e-06 56.6 120 35.0
FAN18G3894 Fragaria x ananassa HOM05D003520 ORTHO05D003332 9.1e-06 56.2 153 28.8


User provided reference genes

Program Settings