Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G11670 Arabidopsis lyrata HOM05D011055 ORTHO05D013192 2.0e-310 1068.5 665 100.0
AT1G63540 Arabidopsis thaliana HOM05D011055 ORTHO05D013192 3.4e-156 556.2 728 52.9
Carub.0002s0133 Capsella rubella HOM05D011055 ORTHO05D013192 1.1e-93 348.6 434 53.7
AL2G11680 Arabidopsis lyrata HOM05D011055 ORTHO05D013192 1.3e-83 315.1 685 42.5
AT1G63530 Arabidopsis thaliana HOM05D011055 ORTHO05D013192 2.6e-63 247.7 691 35.3
Thhalv10023337m.g Eutrema salsugineum HOM05D011055 ORTHO05D013192 1.2e-52 212.2 742 36.4
Sp2g01080 Schrenkiella parvula HOM05D011055 ORTHO05D013192 7.3e-34 149.8 662 33.7
A09p13750 Brassica napus HOM05D011055 ORTHO05D013192 8.9e-32 142.9 419 37.7
BraA09t37027Z Brassica rapa HOM05D011055 ORTHO05D013192 5.8e-31 140.2 418 37.1
BcaC02g10385 Brassica carinata HOM05D011055 ORTHO05D013192 2.2e-30 138.3 398 35.4
C04p29490 Brassica napus HOM05D011055 ORTHO05D013192 2.2e-30 138.3 398 35.4
C09p16390 Brassica napus HOM05D011055 ORTHO05D013192 1.1e-29 136.0 666 33.5
CARHR047830 Cardamine hirsuta HOM05D011055 ORTHO05D013192 3.9e-27 127.5 686 28.7
A09p13730 Brassica napus HOM05D011055 ORTHO05D013192 6.0e-20 103.6 533 33.0
BraA09t37024Z Brassica rapa HOM05D011055 ORTHO05D013192 7.8e-20 103.2 536 32.6
BolC9t54549H Brassica oleracea HOM05D011055 ORTHO05D013192 3.9e-19 100.9 433 37.4
CARHR047840 Cardamine hirsuta HOM05D011055 ORTHO05D013192 1.8e-16 92.0 709 35.3
C09p16380 Brassica napus HOM05D011055 ORTHO05D013192 4.7e-09 67.4 177 35.6
PSO210G5211 Papaver somniferum HOM05D002142 ORTHO05D000047 3.8e-06 57.8 259 32.8
BcaC05g24889 Brassica carinata HOM05D002142 ORTHO05D001189 4.9e-06 57.4 70 50.0
C05p08540 Brassica napus HOM05D002142 ORTHO05D001189 4.9e-06 57.4 70 50.0
BolC5t29604H Brassica oleracea HOM05D002142 ORTHO05D001189 4.9e-06 57.4 70 50.0
BraA06t23919Z Brassica rapa HOM05D002142 ORTHO05D001189 4.9e-06 57.4 70 50.0
Eucgr.L00343 Eucalyptus grandis HOM05D002142 ORTHO05D001189 4.9e-06 57.4 84 48.8
CBR_g19847 Chara braunii HOM05D002142 ORTHO05D001189 6.4e-06 57.0 73 47.9
Thhalv10023238m.g Eutrema salsugineum HOM05D002142 ORTHO05D001189 6.4e-06 57.0 111 36.0
Atru.chr9.1824 Acer truncatum HOM05D002142 ORTHO05D001189 8.4e-06 56.6 98 39.8
BcaC05g24895 Brassica carinata HOM05D002142 ORTHO05D001189 8.4e-06 56.6 172 33.1
A08p34000 Brassica napus HOM05D002142 ORTHO05D001189 8.4e-06 56.6 67 52.2
C08p13660 Brassica napus HOM05D002142 ORTHO05D001189 8.4e-06 56.6 67 52.2
BolC8t49004H Brassica oleracea HOM05D002142 ORTHO05D001189 8.4e-06 56.6 67 52.2
Ciclev10000333m.g Citrus clementina HOM05D002142 ORTHO05D001189 8.4e-06 56.6 81 48.1


User provided reference genes

Program Settings