Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G11610 Arabidopsis lyrata HOM05D000162 ORTHO05D021394 3.7e-52 208.4 142 100.0
C09p16530 Brassica napus HOM05D000162 ORTHO05D000090 6.8e-14 81.3 86 50.0
A09p13820 Brassica napus HOM05D000162 ORTHO05D000090 8.9e-14 80.9 86 50.0
BraA09t37034Z Brassica rapa HOM05D000162 ORTHO05D000090 1.2e-13 80.5 86 50.0
BcaC04g22688 Brassica carinata HOM05D000162 ORTHO05D000090 2.6e-13 79.3 86 48.8
BolC9t54562H Brassica oleracea HOM05D000162 ORTHO05D000090 2.6e-13 79.3 86 48.8
Carub.0002s0151 Capsella rubella HOM05D000162 ORTHO05D000090 2.4e-11 72.8 94 45.7
AT1G64100 Arabidopsis thaliana HOM05D010613 ORTHO05D014059 7.0e-11 71.2 41 80.5
AL2G12180 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 2.7e-10 69.3 41 80.5
AL2G12890 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 2.3e-09 66.2 41 78.0
AL2G12900 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 9.5e-08 60.8 42 69.0
Thhalv10024048m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 9.5e-08 60.8 43 62.8
Thhalv10023918m.g Eutrema salsugineum HOM05D000162 ORTHO05D020197 1.2e-07 60.5 38 71.1
Thhalv10023907m.g Eutrema salsugineum HOM05D000162 ORTHO05D021394 2.1e-07 59.7 38 68.4
BolC4t24490H Brassica oleracea HOM05D000162 ORTHO05D000090 2.8e-07 59.3 42 66.7
A09p64860 Brassica napus HOM05D000162 ORTHO05D003288 1.4e-06 57.0 48 56.2
BolC4t24472H Brassica oleracea HOM05D000162 ORTHO05D000090 1.8e-06 56.6 81 42.0
Potri.013G149800 Populus trichocarpa HOM05D000162 ORTHO05D000090 1.8e-06 56.6 93 36.6
Manes.09G016633 Manihot esculenta HOM05D000162 ORTHO05D000090 6.8e-06 54.7 103 33.0


User provided reference genes

Program Settings