Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G11150 Arabidopsis lyrata HOM05D000607 ORTHO05D014031 5.2e-58 227.6 125 100.0
AT1G63960 Arabidopsis thaliana HOM05D000607 ORTHO05D014031 4.1e-47 191.4 132 82.6
Carub.0002s0088 Capsella rubella HOM05D000607 ORTHO05D014031 1.2e-33 146.7 129 68.2
Sp2g00730 Schrenkiella parvula HOM05D000607 ORTHO05D014031 2.3e-29 132.5 129 66.7
CARHR047020 Cardamine hirsuta HOM05D000607 ORTHO05D014031 7.5e-25 117.5 99 70.7
BcaB07g31534 Brassica carinata HOM05D000607 ORTHO05D014031 9.2e-23 110.5 128 50.0
BcaC04g22663 Brassica carinata HOM05D000607 ORTHO05D014031 2.0e-22 109.4 132 56.1
C09p16930 Brassica napus HOM05D000607 ORTHO05D014031 2.0e-22 109.4 132 56.1
BolC9t54590H Brassica oleracea HOM05D000607 ORTHO05D014031 2.0e-22 109.4 132 56.1
BcaC02g10360 Brassica carinata HOM05D000607 ORTHO05D014031 2.7e-22 109.0 128 50.0
C04p29770 Brassica napus HOM05D000607 ORTHO05D014031 2.7e-22 109.0 128 50.0
A09p14040 Brassica napus HOM05D000607 ORTHO05D014031 6.0e-22 107.8 130 56.9
BolC4t24511H Brassica oleracea HOM05D000607 ORTHO05D014031 6.0e-22 107.8 128 49.2
BraA09t37051Z Brassica rapa HOM05D000607 ORTHO05D014031 6.0e-22 107.8 130 56.9
Thhalv10023803m.g Eutrema salsugineum HOM05D000607 ORTHO05D014031 4.0e-18 95.1 98 63.3
AL2G11160 Arabidopsis lyrata HOM05D000607 ORTHO05D031432 2.3e-13 79.3 123 39.0
AT1G63950 Arabidopsis thaliana HOM05D000607 ORTHO05D031432 4.0e-10 68.6 95 36.8
Medtr8g098915 Medicago truncatula HOM05D000607 ORTHO05D000518 2.0e-09 66.2 124 37.9
Sed0011612 Sechium edule HOM05D000607 ORTHO05D000518 2.0e-09 66.2 124 32.3
QL04p055236 Quercus lobata HOM05D000607 ORTHO05D000518 3.4e-09 65.5 76 43.4
Sc22g0005310 Simmondsia chinensis HOM05D000607 ORTHO05D000518 4.4e-09 65.1 127 40.2
Ah.12g051880 Amaranthus hybridus HOM05D000607 ORTHO05D000518 7.5e-09 64.3 73 43.8
arahy.Tifrunner.gnm1.ann1.R1DXQN Arachis hypogaea HOM05D000607 ORTHO05D000518 1.3e-08 63.5 67 43.3
EL10Ac5g12831 Beta vulgaris HOM05D000607 ORTHO05D000518 1.3e-08 63.5 73 43.8
Haze_15557 Corylus avellana HOM05D000607 ORTHO05D000518 1.3e-08 63.5 76 42.1
MELO3C005711.2 Cucumis melo HOM05D000607 ORTHO05D000518 1.3e-08 63.5 131 29.8
CiPaw.01G066100 Carya illinoinensis HOM05D000607 ORTHO05D000518 1.7e-08 63.2 76 39.5
Glyma.05G211600 Glycine max HOM05D000607 ORTHO05D000518 1.7e-08 63.2 74 43.2
Sc01g0009810 Simmondsia chinensis HOM05D000607 ORTHO05D000518 1.7e-08 63.2 67 46.3
Cpa.g.sc631.1 Carica papaya HOM05D000607 ORTHO05D000518 2.9e-08 62.4 129 40.3
Ciclev10022806m.g Citrus clementina HOM05D000607 ORTHO05D000518 3.7e-08 62.0 134 30.6
FAN10G2740 Fragaria x ananassa HOM05D000607 ORTHO05D000518 3.7e-08 62.0 73 42.5
Phvul.002G292900 Phaseolus vulgaris HOM05D000607 ORTHO05D000518 3.7e-08 62.0 74 41.9
RcHm_v2.0_Chr1g0357621 Rosa chinensis HOM05D000607 ORTHO05D000518 4.9e-08 61.6 74 41.9
Hund11438 Selenicereus undatus HOM05D000607 ORTHO05D000518 4.9e-08 61.6 73 39.7
GSVIVG01026961001 Vitis vinifera HOM05D000607 ORTHO05D000518 4.9e-08 61.6 74 39.2
Gorai.004G138000 Gossypium raimondii HOM05D000607 ORTHO05D000518 6.4e-08 61.2 128 33.6
Psat3g105880 Pisum sativum HOM05D000607 ORTHO05D000518 6.4e-08 61.2 73 42.5
PGR031G1465 Punica granatum HOM05D000607 ORTHO05D000518 6.4e-08 61.2 74 43.2
arahy.Tifrunner.gnm1.ann1.T95N5A Arachis hypogaea HOM05D000607 ORTHO05D000518 8.3e-08 60.8 73 42.5
ClCG01G002360 Citrullus lanatus HOM05D000607 ORTHO05D000518 8.3e-08 60.8 130 33.8
VMungo0251G1348 Vigna mungo HOM05D000607 ORTHO05D000518 8.3e-08 60.8 74 41.9
TPR.G26971 Trifolium pratense HOM05D000607 ORTHO05D000518 1.1e-07 60.5 73 42.5
TAR375G0562 Trochodendron aralioides HOM05D000607 ORTHO05D000518 1.1e-07 60.5 124 38.7
Atru.chr5.557 Acer truncatum HOM05D000607 ORTHO05D000518 1.4e-07 60.1 73 43.8
AUR62019749 Chenopodium quinoa HOM05D000002 ORTHO05D000047 1.4e-07 60.1 73 41.1
MELO3C021183.2 Cucumis melo HOM05D000607 ORTHO05D000518 1.4e-07 60.1 74 40.5
Dinv28383 Davidia involucrata HOM05D000607 ORTHO05D000518 1.4e-07 60.1 131 36.6
FvH4_7g15300 Fragaria vesca HOM05D000607 ORTHO05D000518 1.4e-07 60.1 73 41.1
FAN01G1161 Fragaria x ananassa HOM05D000607 ORTHO05D000518 1.4e-07 60.1 73 41.1
FAN03G3173 Fragaria x ananassa HOM05D000607 ORTHO05D000518 1.4e-07 60.1 73 41.1
FAN06G0906 Fragaria x ananassa HOM05D000607 ORTHO05D000518 1.4e-07 60.1 73 41.1
FAN06G1716 Fragaria x ananassa HOM05D000607 ORTHO05D000518 1.4e-07 60.1 73 41.1
FAN10G4193 Fragaria x ananassa HOM05D000607 ORTHO05D000518 1.4e-07 60.1 73 41.1
Lj4g0006505 Lotus japonicus HOM05D000607 ORTHO05D000518 1.4e-07 60.1 73 41.1
Medtr7g079110 Medicago truncatula HOM05D000607 ORTHO05D000518 1.4e-07 60.1 73 42.5
Hund27245 Selenicereus undatus HOM05D000607 ORTHO05D000518 1.4e-07 60.1 74 39.2
TPR.G12746 Trifolium pratense HOM05D000607 ORTHO05D000518 1.4e-07 60.1 132 35.6
AT1G01490 Arabidopsis thaliana HOM05D000607 ORTHO05D000518 1.9e-07 59.7 74 40.5
Carub.0001s0075 Capsella rubella HOM05D000607 ORTHO05D000518 1.9e-07 59.7 74 40.5
CARHR000880 Cardamine hirsuta HOM05D000607 ORTHO05D000518 1.9e-07 59.7 76 39.5
AUR62004408 Chenopodium quinoa HOM05D000607 ORTHO05D000518 1.9e-07 59.7 74 39.2
AUR62010745 Chenopodium quinoa HOM05D000607 ORTHO05D000518 1.9e-07 59.7 73 41.1
ClCG07G007940 Citrullus lanatus HOM05D000607 ORTHO05D000518 1.9e-07 59.7 75 44.0
Manes.05G030000 Manihot esculenta HOM05D000607 ORTHO05D000518 1.9e-07 59.7 75 40.0
Sed0004002 Sechium edule HOM05D000607 ORTHO05D000518 1.9e-07 59.7 73 41.1
AL1G10920 Arabidopsis lyrata HOM05D000607 ORTHO05D000518 2.4e-07 59.3 74 39.2
C05p00520 Brassica napus HOM05D000607 ORTHO05D000518 2.4e-07 59.3 74 39.2
BolC5t28841H Brassica oleracea HOM05D000607 ORTHO05D000518 2.4e-07 59.3 74 39.2
CANSAT21G1330 Cannabis sativa HOM05D000607 ORTHO05D000518 2.4e-07 59.3 75 37.3
MELO3C006083.2 Cucumis melo HOM05D000607 ORTHO05D000518 2.4e-07 59.3 76 42.1
CsaV3_3G008630 Cucumis sativus L. HOM05D000607 ORTHO05D000518 2.4e-07 59.3 76 42.1
CsaV3_6G000880 Cucumis sativus L. HOM05D000607 ORTHO05D000518 2.4e-07 59.3 74 40.5
Lsat_1_v5_gn_6_4461 Lactuca sativa HOM05D000607 ORTHO05D000518 2.4e-07 59.3 137 37.2
Sp1g00820 Schrenkiella parvula HOM05D000607 ORTHO05D000518 2.4e-07 59.3 74 39.2
Hund14275 Selenicereus undatus HOM05D000607 ORTHO05D000518 2.4e-07 59.3 75 37.3
Hund16675 Selenicereus undatus HOM05D000607 ORTHO05D000518 2.4e-07 59.3 74 37.8
Sc23g0002560 Simmondsia chinensis HOM05D000607 ORTHO05D000518 2.4e-07 59.3 74 39.2
HPP92_005345 Vanilla planifolia HOM05D000607 ORTHO05D000518 2.4e-07 59.3 75 40.0
ClCG06G003430 Citrullus lanatus HOM05D000607 ORTHO05D000518 3.2e-07 58.9 73 41.1
Gohir.D08G154100 Gossypium hirsutum HOM05D000607 ORTHO05D000518 3.2e-07 58.9 75 40.0
Gorai.004G160000 Gossypium raimondii HOM05D000607 ORTHO05D000518 3.2e-07 58.9 75 40.0
MD01G1070300 Malus domestica HOM05D000607 ORTHO05D000518 3.2e-07 58.9 73 41.1
BcaC07g42357 Brassica carinata HOM05D000607 ORTHO05D000518 4.1e-07 58.5 74 39.2
C08p53680 Brassica napus HOM05D000607 ORTHO05D000518 4.1e-07 58.5 74 39.2
BolC8t52882H Brassica oleracea HOM05D000607 ORTHO05D000518 4.1e-07 58.5 74 39.2
BraA09t42248Z Brassica rapa HOM05D000607 ORTHO05D000518 4.1e-07 58.5 74 39.2
CiPaw.02G034100 Carya illinoinensis HOM05D000607 ORTHO05D000518 4.1e-07 58.5 74 40.5
CsaV3_5G002430 Cucumis sativus L. HOM05D000607 ORTHO05D000518 4.1e-07 58.5 74 35.1
Gohir.D08G134800 Gossypium hirsutum HOM05D000607 ORTHO05D000518 4.1e-07 58.5 128 33.6
MD07G1131800 Malus domestica HOM05D000607 ORTHO05D000518 4.1e-07 58.5 73 41.1
Manes.01G252800 Manihot esculenta HOM05D000607 ORTHO05D000518 4.1e-07 58.5 75 41.3
Sed0003368 Sechium edule HOM05D000607 ORTHO05D000518 4.1e-07 58.5 73 39.7
Sed0027426 Sechium edule HOM05D000607 ORTHO05D000518 4.1e-07 58.5 73 41.1
TWI59G1362 Tripterygium wilfordii HOM05D000607 ORTHO05D000518 4.1e-07 58.5 73 41.1
A10p00490 Brassica napus HOM05D000607 ORTHO05D000518 5.4e-07 58.2 66 42.4
BraA10t42328Z Brassica rapa HOM05D000607 ORTHO05D000518 5.4e-07 58.2 66 42.4
AUR62022614 Chenopodium quinoa HOM05D000607 ORTHO05D000518 5.4e-07 58.2 74 39.2
TWI14G0105 Tripterygium wilfordii HOM05D000607 ORTHO05D000518 5.4e-07 58.2 76 39.5
MBI04_g35361_MAGBIO Magnolia biondii HOM05D000607 ORTHO05D000518 7.1e-07 57.8 76 39.5
Psat7g030320 Pisum sativum HOM05D000607 ORTHO05D000518 7.1e-07 57.8 75 42.7
PGR031G0601 Punica granatum HOM05D000607 ORTHO05D000518 7.1e-07 57.8 132 36.4
Gohir.A08G114600 Gossypium hirsutum HOM05D000607 ORTHO05D000518 9.2e-07 57.4 130 36.2
Gohir.A08G132700 Gossypium hirsutum HOM05D000607 ORTHO05D000518 9.2e-07 57.4 75 38.7
Nn1g01666 Nelumbo nucifera HOM05D000607 ORTHO05D000518 9.2e-07 57.4 76 38.2
Potri.004G073000 Populus trichocarpa HOM05D000607 ORTHO05D000518 9.2e-07 57.4 130 39.2
Sc22g0005320 Simmondsia chinensis HOM05D000607 ORTHO05D000518 9.2e-07 57.4 73 43.8
GSVIVG01019413001 Vitis vinifera HOM05D000607 ORTHO05D000518 9.2e-07 57.4 75 36.0
Atru.chr9.2122 Acer truncatum HOM05D000607 ORTHO05D000518 1.2e-06 57.0 72 36.1
arahy.Tifrunner.gnm1.ann1.EZ7NE2 Arachis hypogaea HOM05D000607 ORTHO05D000518 1.2e-06 57.0 73 37.0
arahy.Tifrunner.gnm1.ann1.S3EA7B Arachis hypogaea HOM05D000607 ORTHO05D000518 1.2e-06 57.0 73 37.0
Haze_08764 Corylus avellana HOM05D001272 ORTHO05D009067 1.2e-06 57.0 73 38.4
Haze_08767 Corylus avellana HOM05D001272 ORTHO05D009067 1.2e-06 57.0 73 38.4
Duzib133G0414 Durio zibethinus HOM05D000607 ORTHO05D000518 1.2e-06 57.0 76 39.5
Glyma.18G238000 Glycine max HOM05D000607 ORTHO05D000518 1.2e-06 57.0 73 41.1
Nn6g35654 Nelumbo nucifera HOM05D000607 ORTHO05D000518 1.2e-06 57.0 76 40.8
Potri.003G132200 Populus trichocarpa HOM05D000607 ORTHO05D000518 1.2e-06 57.0 75 36.0
VMungo1383G2717 Vigna mungo HOM05D000607 ORTHO05D000518 1.2e-06 57.0 73 41.1
MSTRG.1837 Avicennia marina HOM05D000607 ORTHO05D000518 1.6e-06 56.6 75 38.7
C03p18190 Brassica napus HOM05D000607 ORTHO05D010164 1.6e-06 56.6 130 30.0
BolC3t14220H Brassica oleracea HOM05D000607 ORTHO05D010164 1.6e-06 56.6 130 30.0
ClCG05G001270 Citrullus lanatus HOM05D000607 ORTHO05D000518 1.6e-06 56.6 74 41.9
Glyma.08G017900 Glycine max HOM05D000607 ORTHO05D000518 1.6e-06 56.6 67 41.8
Glyma.16G032400 Glycine max HOM05D000607 ORTHO05D000518 1.6e-06 56.6 73 41.1
Lalb_Chr03g0034901 Lupinus albus HOM05D000607 ORTHO05D000518 1.6e-06 56.6 128 26.6
PGR042G0975 Punica granatum HOM05D000607 ORTHO05D000518 1.6e-06 56.6 76 38.2
Sed0005218 Sechium edule HOM05D000607 ORTHO05D000518 1.6e-06 56.6 128 40.6
Actinidia28349 Actinidia chinensis HOM05D000607 ORTHO05D000518 2.1e-06 56.2 73 38.4
Cpa.g.c35429 Carica papaya HOM05D000607 ORTHO05D000518 2.1e-06 56.2 113 43.4
Cpa.g.sc356.1 Carica papaya HOM05D000607 ORTHO05D000518 2.1e-06 56.2 74 39.2
Cc08_g15210 Coffea canephora HOM05D000607 ORTHO05D000518 2.1e-06 56.2 67 37.3
CsaV3_5G002420 Cucumis sativus L. HOM05D000607 ORTHO05D000518 2.1e-06 56.2 74 37.8
Migut.E01209 Erythranthe guttata HOM05D000607 ORTHO05D000518 2.1e-06 56.2 124 29.8
THA.LOC104801392 Tarenaya hassleriana HOM05D000607 ORTHO05D000518 2.1e-06 56.2 76 35.5
Thecc.03G286000 Theobroma cacao HOM05D000607 ORTHO05D000518 2.1e-06 56.2 73 37.0
C03p18170 Brassica napus HOM05D000607 ORTHO05D010164 2.7e-06 55.8 130 30.0
BolC3t14218H Brassica oleracea HOM05D000607 ORTHO05D010164 2.7e-06 55.8 130 30.0
Dinv37600 Davidia involucrata HOM05D000607 ORTHO05D000518 2.7e-06 55.8 75 36.0
Duzib205G1151 Durio zibethinus HOM05D000607 ORTHO05D000518 2.7e-06 55.8 67 37.3
Glyma.07G065800 Glycine max HOM05D000607 ORTHO05D000518 2.7e-06 55.8 73 41.1
Glyma.09G255100 Glycine max HOM05D000607 ORTHO05D000518 2.7e-06 55.8 73 39.7
Lj1g0011016 Lotus japonicus HOM05D000607 ORTHO05D000518 2.7e-06 55.8 73 39.7
MBI11_g29824_MAGBIO Magnolia biondii HOM05D000607 ORTHO05D000518 2.7e-06 55.8 76 38.2
Oeu003345.3 Olea europaea HOM05D000033 ORTHO05D013503 2.7e-06 55.8 76 38.2
Potri.002G163400 Populus trichocarpa HOM05D000607 ORTHO05D000518 2.7e-06 55.8 77 37.7
Atru.chr12.1510 Acer truncatum HOM05D004004 ORTHO05D003284 3.5e-06 55.5 69 36.2
ATR0620G004 Amborella trichopoda HOM05D000607 ORTHO05D000518 3.5e-06 55.5 128 35.9
Medtr6g049320 Medicago truncatula HOM05D000607 ORTHO05D000518 3.5e-06 55.5 75 32.0
Aqoxy5G04072 Aquilegia oxysepala HOM05D000607 ORTHO05D000518 4.6e-06 55.1 134 34.3
A03p15560 Brassica napus HOM05D000607 ORTHO05D010164 4.6e-06 55.1 130 30.0
BraA03t10848Z Brassica rapa HOM05D000607 ORTHO05D010164 4.6e-06 55.1 130 30.0
COL.COLO4_12772 Corchorus olitorius HOM05D000607 ORTHO05D000518 4.6e-06 55.1 74 39.2
Lj3g0025676 Lotus japonicus HOM05D000607 ORTHO05D000518 4.6e-06 55.1 75 38.7
MD06G1090200 Malus domestica HOM05D000607 ORTHO05D000518 4.6e-06 55.1 67 40.3
PSO782G3559 Papaver somniferum HOM05D000607 ORTHO05D000518 4.6e-06 55.1 76 36.8
Phvul.008G058500 Phaseolus vulgaris HOM05D000607 ORTHO05D000518 4.6e-06 55.1 73 39.7
CSS0006743 Camellia sinensis var. sinensis HOM05D001272 ORTHO05D009067 6.0e-06 54.7 76 42.1
CSS0048498 Camellia sinensis var. sinensis HOM05D000607 ORTHO05D000518 6.0e-06 54.7 76 42.1
Medtr8g028615 Medicago truncatula HOM05D000607 ORTHO05D000518 6.0e-06 54.7 73 39.7
vmacro11405 Vaccinium macrocarpon HOM05D000607 ORTHO05D000518 6.0e-06 54.7 76 43.4
HPP92_002469 Vanilla planifolia HOM05D000607 ORTHO05D000518 6.0e-06 54.7 67 38.8
Actinidia08584 Actinidia chinensis HOM05D000607 ORTHO05D000518 7.8e-06 54.3 111 37.8
arahy.Tifrunner.gnm1.ann1.B91B55 Arachis hypogaea HOM05D000607 ORTHO05D000518 7.8e-06 54.3 66 39.4
arahy.Tifrunner.gnm1.ann1.EAU3KD Arachis hypogaea HOM05D000607 ORTHO05D000518 7.8e-06 54.3 66 39.4
CiPaw.05G261800 Carya illinoinensis HOM05D000607 ORTHO05D000518 7.8e-06 54.3 125 35.2
Ca_23544_v3 Cicer arietinum L. HOM05D000607 ORTHO05D000518 7.8e-06 54.3 73 38.4
MELO3C005710.2 Cucumis melo HOM05D000607 ORTHO05D000518 7.8e-06 54.3 75 33.3
CsaV3_4G006080 Cucumis sativus L. HOM05D000607 ORTHO05D000518 7.8e-06 54.3 67 40.3
Gohir.A12G107200 Gossypium hirsutum HOM05D000607 ORTHO05D000518 7.8e-06 54.3 82 37.8
Lalb_Chr10g0096691 Lupinus albus HOM05D000607 ORTHO05D000518 7.8e-06 54.3 72 34.7
Medtr6g049280 Medicago truncatula HOM05D000607 ORTHO05D000518 7.8e-06 54.3 75 33.3
Nn6g32425 Nelumbo nucifera HOM05D000607 ORTHO05D000518 7.8e-06 54.3 74 39.2
vmacro11406 Vaccinium macrocarpon HOM05D000607 ORTHO05D000518 7.8e-06 54.3 76 42.1


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