Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G10440 Arabidopsis lyrata HOM05D010600 ORTHO05D007875 1.5e-59 232.6 115 100.0
AT1G64405 Arabidopsis thaliana HOM05D010600 ORTHO05D007875 1.2e-53 213.0 119 89.1
BcaB07g31463 Brassica carinata HOM05D010600 ORTHO05D007875 1.2e-45 186.4 117 82.9
Carub.0002s0036 Capsella rubella HOM05D010600 ORTHO05D007875 1.6e-45 186.0 119 82.4
CARHR046510 Cardamine hirsuta HOM05D010600 ORTHO05D007875 1.3e-44 183.0 116 79.3
BcaC04g22568 Brassica carinata HOM05D010600 ORTHO05D007875 3.0e-44 181.8 120 80.0
BcaB07g31500 Brassica carinata HOM05D010600 ORTHO05D007875 5.1e-44 181.0 115 81.7
Sp2g00320 Schrenkiella parvula HOM05D010600 ORTHO05D007875 3.3e-43 178.3 118 80.5
Thhalv10023875m.g Eutrema salsugineum HOM05D010600 ORTHO05D007875 9.6e-43 176.8 118 77.1
C09p17810 Brassica napus HOM05D010600 ORTHO05D007875 1.6e-42 176.0 121 80.2
BolC9t54679H Brassica oleracea HOM05D010600 ORTHO05D007875 1.6e-42 176.0 121 80.2
A09p14360 Brassica napus HOM05D010600 ORTHO05D007875 1.8e-41 172.6 117 78.6
BraA09t37083Z Brassica rapa HOM05D010600 ORTHO05D007875 1.8e-41 172.6 117 78.6
BcaC04g22619 Brassica carinata HOM05D010600 ORTHO05D007875 6.9e-41 170.6 115 77.4
C09p17280 Brassica napus HOM05D010600 ORTHO05D007875 1.2e-40 169.9 115 77.4
BolC9t54630H Brassica oleracea HOM05D010600 ORTHO05D007875 1.2e-40 169.9 115 77.4
Aa31LG2G1420 Aethionema arabicum HOM05D010600 ORTHO05D007875 8.7e-36 153.7 118 69.5
A09p14720 Brassica napus HOM05D010600 ORTHO05D007875 1.1e-33 146.7 119 66.4
BraA09t37118Z Brassica rapa HOM05D010600 ORTHO05D007875 1.1e-33 146.7 119 66.4
THA.LOC104817601 Tarenaya hassleriana HOM05D010600 ORTHO05D007875 2.5e-27 125.6 115 61.7
Cpa.g.sc79.34 Carica papaya HOM05D007590 ORTHO05D007875 3.9e-12 75.1 119 46.2
Rhsim02G0243500 Rhododendron simsii HOM05D007590 ORTHO05D007875 6.7e-12 74.3 118 41.5
CiPaw.12G082900 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.3e-10 70.1 115 37.4
TAR629G1835 Trochodendron aralioides HOM05D007590 ORTHO05D007875 3.7e-10 68.6 113 40.7
CiPaw.11G121300 Carya illinoinensis HOM05D007590 ORTHO05D007875 6.3e-10 67.8 115 38.3
Duzib205G1174 Durio zibethinus HOM05D007590 ORTHO05D007875 8.2e-10 67.4 114 38.6
Peaxi162Scf00102g00178 Petunia axillaris HOM05D007590 ORTHO05D007875 8.2e-10 67.4 113 38.9
TAR375G1006 Trochodendron aralioides HOM05D007590 ORTHO05D007875 8.2e-10 67.4 113 40.7
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 1.4e-09 66.6 114 39.5
TAR636G1032 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.8e-09 66.2 112 36.6
Duzib068G0682 Durio zibethinus HOM05D007590 ORTHO05D007875 2.4e-09 65.9 117 39.3
Hma1.2p1_1746F.1_g300410 Hydrangea macrophylla HOM05D007590 ORTHO05D007875 2.4e-09 65.9 120 37.5
Aqoxy5G04230 Aquilegia oxysepala HOM05D007590 ORTHO05D007875 5.3e-09 64.7 115 40.0
Prupe.5G120200 Prunus persica HOM05D007590 ORTHO05D007875 5.3e-09 64.7 120 38.3
RcHm_v2.0_Chr7g0194781 Rosa chinensis HOM05D007590 ORTHO05D007875 5.3e-09 64.7 119 36.1
Thecc.03G298200 Theobroma cacao HOM05D007590 ORTHO05D007875 1.5e-08 63.2 118 38.1
AUR62010841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 2.6e-08 62.4 115 38.3
Nn1g01873 Nelumbo nucifera HOM05D007590 ORTHO05D007875 2.6e-08 62.4 116 37.1
Manes.02G009900 Manihot esculenta HOM05D007590 ORTHO05D007875 4.5e-08 61.6 122 38.5
TAR374G1746 Trochodendron aralioides HOM05D007590 ORTHO05D007875 4.5e-08 61.6 117 36.8
AUR62019841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 7.7e-08 60.8 115 40.0
PGSC0003DMG400012280 Solanum tuberosum HOM05D007590 ORTHO05D007875 7.7e-08 60.8 113 38.1
Solyc08g082370.1 Solanum lycopersicum HOM05D007590 ORTHO05D007875 1.7e-07 59.7 113 38.9
Cc08_g16080 Coffea canephora HOM05D007590 ORTHO05D007875 2.2e-07 59.3 122 36.1
TPR.G25602 Trifolium pratense HOM05D007590 ORTHO05D007875 2.2e-07 59.3 113 32.7
CSS0045762 Camellia sinensis var. sinensis HOM05D007590 ORTHO05D007875 2.9e-07 58.9 120 34.2
Lsat_1_v5_gn_6_83961 Lactuca sativa HOM05D007590 ORTHO05D007875 2.9e-07 58.9 115 40.0
Sopen08g030630 Solanum pennellii HOM05D007590 ORTHO05D007875 3.8e-07 58.5 113 38.1
TWI60G0225 Tripterygium wilfordii HOM05D007590 ORTHO05D007875 3.8e-07 58.5 113 34.5
QL02p030422 Quercus lobata HOM05D007590 ORTHO05D007875 6.5e-07 57.8 127 33.9
Sopen08g004200 Solanum pennellii HOM05D007590 ORTHO05D007875 6.5e-07 57.8 114 37.7
Glyma.11G017400 Glycine max HOM05D007590 ORTHO05D007875 8.5e-07 57.4 113 30.1
Nn3g19015 Nelumbo nucifera HOM05D007590 ORTHO05D007875 8.5e-07 57.4 119 37.0
LjContig00312_ERROPOS870357g0000452 Lotus japonicus HOM05D007590 ORTHO05D007875 1.1e-06 57.0 123 33.3
Manes.02G010000 Manihot esculenta HOM05D007590 ORTHO05D007875 1.9e-06 56.2 118 37.3
Duzib084G0874 Durio zibethinus HOM05D007590 ORTHO05D007875 2.5e-06 55.8 112 35.7
HanXRQChr03g0083501 Helianthus annuus HOM05D007590 ORTHO05D007875 2.5e-06 55.8 113 38.9
Medtr5g009260 Medicago truncatula HOM05D007590 ORTHO05D007875 2.5e-06 55.8 113 32.7
PGSC0003DMG400005790 Solanum tuberosum HOM05D007590 ORTHO05D007875 2.5e-06 55.8 115 34.8
Lalb_Chr05g0211541 Lupinus albus HOM05D007590 ORTHO05D007875 3.2e-06 55.5 115 33.0
TAR629G2201 Trochodendron aralioides HOM05D007590 ORTHO05D007875 4.2e-06 55.1 115 33.9
CDE10G0927 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 5.5e-06 54.7 110 34.5
FAN08G0943 Fragaria x ananassa HOM05D007590 ORTHO05D007875 5.5e-06 54.7 122 34.4
MSTRG.25673 Avicennia marina HOM05D007590 ORTHO05D007875 9.4e-06 53.9 118 33.9
EL10Ac5g12916 Beta vulgaris HOM05D007590 ORTHO05D007875 9.4e-06 53.9 75 41.3
CiPaw.12G082700 Carya illinoinensis HOM05D007590 ORTHO05D007875 9.4e-06 53.9 114 33.3
Gohir.D12G237700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 9.4e-06 53.9 111 34.2
Gohir.D12G237966 Gossypium hirsutum HOM05D007590 ORTHO05D007875 9.4e-06 53.9 111 34.2


User provided reference genes

Program Settings