Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 2.9e-310 1067.8 560 100.0
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 4.1e-296 1020.8 560 95.2
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 3.8e-278 961.1 565 89.7
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 5.7e-274 947.2 564 89.4
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 7.0e-272 940.3 562 88.6
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 1.6e-271 939.1 566 88.3
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 5.9e-271 937.2 564 88.1
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 1.1e-269 932.9 564 87.9
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 9.4e-269 929.9 564 87.6
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 1.2e-268 929.5 567 89.1
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 8.3e-257 890.2 569 84.2
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 5.7e-250 867.5 532 86.5
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 1.3e-225 786.6 582 73.5
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 3.8e-201 705.3 528 69.5
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 6.4e-201 704.5 494 72.5
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 1.9e-200 703.0 543 66.9
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 1.2e-199 700.3 578 65.6
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 1.2e-199 700.3 578 65.6
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 1.8e-198 696.4 497 71.4
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 3.9e-198 695.3 497 71.2
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 3.9e-198 695.3 500 71.2
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 5.1e-198 694.9 497 71.4
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 5.1e-198 694.9 516 70.7
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 4.3e-197 691.8 522 69.2
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 2.8e-196 689.1 509 69.5
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 3.7e-196 688.7 558 65.4
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 2.4e-195 686.0 500 70.2
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 2.4e-195 686.0 511 69.3
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 1.2e-194 683.7 545 66.2
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 1.5e-194 683.3 515 68.3
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 2.6e-194 682.6 555 64.9
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 2.5e-192 676.0 494 69.4
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 3.2e-192 675.6 561 63.5
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 4.6e-191 671.8 564 63.3
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 6.0e-191 671.4 537 64.2
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 2.3e-190 669.5 512 68.4
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 3.0e-190 669.1 509 69.0
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 1.9e-189 666.4 516 66.7
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 7.4e-189 664.5 509 67.8
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 2.1e-188 662.9 513 67.1
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 2.1e-188 662.9 500 67.8
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 4.8e-188 661.8 552 63.4
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 4.8e-188 661.8 573 62.3
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 2.4e-187 659.4 552 62.7
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 5.3e-187 658.3 510 66.9
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 6.9e-187 657.9 542 63.8
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 5.9e-186 654.8 498 67.5
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 1.0e-185 654.1 506 66.2
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 1.7e-185 653.3 514 64.8
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 2.9e-185 652.5 570 61.8
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 2.9e-185 652.5 496 68.1
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 1.1e-184 650.6 540 64.1
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 3.0e-182 642.5 597 60.0
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 8.7e-182 641.0 509 65.0
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 5.7e-181 638.3 508 64.0
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 7.4e-181 637.9 509 65.6
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 1.5e-178 630.2 497 64.8
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 5.9e-178 628.2 523 63.7
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 1.0e-177 627.5 508 65.0
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 2.9e-177 625.9 473 68.1
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 5.0e-177 625.2 434 73.0
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 1.9e-176 623.2 539 60.9
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 6.1e-175 618.2 516 62.6
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 2.0e-173 613.2 495 64.8
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 1.7e-172 610.1 482 64.3
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 2.8e-172 609.4 557 59.1
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 3.7e-172 609.0 525 60.6
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 4.8e-172 608.6 499 63.3
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 1.1e-171 607.4 508 61.6
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 3.8e-169 599.0 511 61.4
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 1.1e-165 587.4 512 59.4
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 3.7e-164 582.4 507 62.1
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 4.8e-164 582.0 583 56.3
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 9.1e-163 577.8 491 61.9
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 2.0e-162 576.6 530 57.9
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 1.7e-161 573.5 566 58.8
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 3.2e-160 569.3 511 59.1
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 5.7e-157 558.5 531 55.2
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 1.8e-155 553.5 583 54.2
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 7.7e-154 548.1 470 61.7
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 8.5e-153 544.7 489 60.1
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 1.6e-151 540.4 528 55.9
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 1.5e-149 533.9 407 65.8
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 2.2e-148 530.0 445 62.7
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 2.5e-144 516.5 521 54.5
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 3.7e-140 502.7 533 53.7
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 4.5e-138 495.7 520 54.0
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 6.8e-134 481.9 505 49.9
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 4.9e-132 475.7 557 51.7
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 5.4e-131 472.2 525 49.7
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 2.3e-129 466.8 518 47.3
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 5.0e-129 465.7 317 75.7
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 3.3e-128 463.0 317 75.1
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 1.3e-124 451.1 496 48.8
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 8.3e-116 421.8 371 57.7
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 3.5e-114 416.4 252 86.9
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 8.6e-113 411.8 231 97.0
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 1.4e-99 367.9 518 42.9
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 7.4e-64 249.2 560 34.5
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 1.3e-60 238.4 196 61.7
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 1.1e-56 225.3 250 50.4
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 2.0e-53 214.5 199 53.8
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 6.1e-50 203.0 220 50.9
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 1.4e-49 201.8 182 52.2
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 7.4e-48 196.1 142 71.8
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 1.0e-41 175.6 197 48.7
Cfa021999 Carpinus fangiana HOM05D007126 ORTHO05D008974 2.2e-36 157.9 182 52.2
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 5.7e-32 143.3 177 48.6
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 1.1e-30 139.0 112 65.2
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 3.5e-21 107.5 70 84.3
FAN13G2101 Fragaria x ananassa HOM05D007126 ORTHO05D008974 5.8e-16 90.1 59 79.7
BcaC09g50327 Brassica carinata HOM05D017681 ORTHO05D019883 2.1e-10 71.6 117 40.2
BcaC04g20679 Brassica carinata HOM05D017681 ORTHO05D019883 1.4e-09 68.9 117 38.5


User provided reference genes

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