Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G10070 Arabidopsis lyrata HOM05D007467 ORTHO05D009441 6.5e-122 441.0 275 100.0
AT1G64690 Arabidopsis thaliana HOM05D007467 ORTHO05D009441 7.2e-113 411.0 273 91.9
Carub.0002s0004 Capsella rubella HOM05D007467 ORTHO05D009441 6.2e-88 328.2 274 76.3
Sp2g00870 Schrenkiella parvula HOM05D007467 ORTHO05D009441 1.5e-81 307.0 270 75.9
A09p15270 Brassica napus HOM05D007467 ORTHO05D009441 8.1e-80 301.2 270 73.0
BraA09t37173Z Brassica rapa HOM05D007467 ORTHO05D009441 8.1e-80 301.2 270 73.0
BcaC04g22507 Brassica carinata HOM05D007467 ORTHO05D009441 5.2e-79 298.5 270 66.7
C09p18550 Brassica napus HOM05D007467 ORTHO05D009441 5.2e-79 298.5 270 71.9
BolC9t54751H Brassica oleracea HOM05D007467 ORTHO05D009441 5.2e-79 298.5 270 71.9
Thhalv10023631m.g Eutrema salsugineum HOM05D007467 ORTHO05D009441 1.9e-76 290.0 283 64.7
CARHR046220 Cardamine hirsuta HOM05D007467 ORTHO05D009441 2.7e-75 286.2 271 63.1
BcaB07g31413 Brassica carinata HOM05D007467 ORTHO05D009441 1.1e-71 274.2 271 72.7
Aa31LG2G1740 Aethionema arabicum HOM05D007467 ORTHO05D009441 4.3e-65 252.3 276 62.7
THA.LOC104823626 Tarenaya hassleriana HOM05D007467 ORTHO05D009441 4.2e-36 156.0 278 50.0
Cc08_g16860 Coffea canephora HOM05D007467 ORTHO05D009441 1.9e-33 147.1 282 49.6
Duzib084G1076 Durio zibethinus HOM05D007467 ORTHO05D009441 1.0e-29 134.8 341 34.0
CAN.G567.94 Capsicum annuum HOM05D007467 ORTHO05D009441 1.7e-29 134.0 326 38.7
Peaxi162Scf00074g00113 Petunia axillaris HOM05D007467 ORTHO05D009441 1.7e-29 134.0 311 41.2
Thecc.03G219300 Theobroma cacao HOM05D007467 ORTHO05D009441 2.9e-29 133.3 354 38.1
Duzib205G1912 Durio zibethinus HOM05D007467 ORTHO05D009441 3.8e-29 132.9 349 39.3
PGSC0003DMG400012234 Solanum tuberosum HOM05D007467 ORTHO05D009441 1.1e-28 131.3 298 42.3
Manes.02G001700 Manihot esculenta HOM05D007467 ORTHO05D009441 1.4e-28 131.0 297 35.0
CSS0030138 Camellia sinensis var. sinensis HOM05D007467 ORTHO05D009441 4.2e-28 129.4 330 39.4
Potri.001G082600 Populus trichocarpa HOM05D007467 ORTHO05D009441 4.2e-28 129.4 360 37.2
BcaB07g31547 Brassica carinata HOM05D007467 ORTHO05D009441 1.2e-27 127.9 234 40.6
RcHm_v2.0_Chr7g0187371 Rosa chinensis HOM05D007467 ORTHO05D009441 2.1e-27 127.1 281 38.4
Ciclev10020958m.g Citrus clementina HOM05D007467 ORTHO05D009441 2.7e-27 126.7 318 39.9
COL.COLO4_10812 Corchorus olitorius HOM05D007467 ORTHO05D009441 2.7e-27 126.7 207 41.5
FAN04G1879 Fragaria x ananassa HOM05D007467 ORTHO05D009441 4.6e-27 125.9 307 40.1
QL02p027667 Quercus lobata HOM05D007467 ORTHO05D009441 7.9e-27 125.2 356 37.4
MSTRG.13707 Avicennia marina HOM05D007467 ORTHO05D009441 1.4e-26 124.4 335 40.3
HanXRQChr07g0192371 Helianthus annuus HOM05D007467 ORTHO05D009441 1.4e-26 124.4 268 43.7
Oeu013372.1 Olea europaea HOM05D007467 ORTHO05D009441 1.8e-26 124.0 303 39.3
Gohir.A12G240800 Gossypium hirsutum HOM05D007467 ORTHO05D009441 2.3e-26 123.6 278 34.9
FAN13G1608 Fragaria x ananassa HOM05D007467 ORTHO05D009441 5.1e-26 122.5 299 39.5
Gorai.006G205400 Gossypium raimondii HOM05D007467 ORTHO05D009441 1.5e-25 120.9 251 45.8
Gorai.008G259400 Gossypium raimondii HOM05D007467 ORTHO05D009441 1.5e-25 120.9 278 34.2
Sabra01G0059300 Salix brachista HOM05D007467 ORTHO05D009441 1.5e-25 120.9 327 37.6
Gohir.D12G242100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 2.0e-25 120.6 278 33.8
FvH4_5g10770 Fragaria vesca HOM05D007467 ORTHO05D009441 3.3e-25 119.8 285 40.4
FAN18G0937 Fragaria x ananassa HOM05D007467 ORTHO05D009441 3.3e-25 119.8 285 40.4
Prupe.5G131500 Prunus persica HOM05D007467 ORTHO05D009441 3.3e-25 119.8 377 35.3
Haze_09186 Corylus avellana HOM05D007467 ORTHO05D009441 4.3e-25 119.4 346 37.6
DCAR_006558 Daucus carota HOM05D007467 ORTHO05D009441 4.3e-25 119.4 301 33.2
Gohir.D09G183100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 4.3e-25 119.4 251 45.4
Cfa011912 Carpinus fangiana HOM05D007467 ORTHO05D009441 7.4e-25 118.6 350 37.4
Lsat_1_v5_gn_6_10100 Lactuca sativa HOM05D007467 ORTHO05D009441 7.4e-25 118.6 281 33.5
Aqoxy7G00009 Aquilegia oxysepala HOM05D007467 ORTHO05D009441 9.7e-25 118.2 270 43.0
Gohir.A09G188250 Gossypium hirsutum HOM05D007467 ORTHO05D009441 9.7e-25 118.2 248 46.4
FAN08G2920 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.7e-24 117.5 281 41.3
Lj2P155T22 Lonicera japonica HOM05D007467 ORTHO05D009441 1.7e-24 117.5 256 45.7
Sopen08g031410 Solanum pennellii HOM05D007467 ORTHO05D009441 2.8e-24 116.7 244 41.0
GSVIVG01019666001 Vitis vinifera HOM05D007467 ORTHO05D009441 1.4e-23 114.4 201 51.7
Atru.chr9.1852 Acer truncatum HOM05D007467 ORTHO05D009441 4.1e-23 112.8 305 40.7
CiPaw.11G111200 Carya illinoinensis HOM05D007467 ORTHO05D009441 9.1e-23 111.7 202 53.0
MD06G1120900 Malus domestica HOM05D007467 ORTHO05D009441 2.0e-22 110.5 350 34.0
MD14G1137500 Malus domestica HOM05D007467 ORTHO05D009441 2.0e-22 110.5 348 30.2
Dinv18747 Davidia involucrata HOM05D007467 ORTHO05D009441 4.5e-22 109.4 272 42.3
ECA233G1457 Erigeron canadensis HOM05D007467 ORTHO05D009441 7.7e-22 108.6 275 40.4
Oeu042839.1 Olea europaea HOM05D007467 ORTHO05D009441 2.9e-21 106.7 320 38.4
Nitab4.5_0002720g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 5.0e-21 105.9 242 43.4
Nitab4.5_0008141g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 1.9e-20 104.0 242 43.0
Solyc08g083220.1 Solanum lycopersicum HOM05D007467 ORTHO05D009441 2.5e-20 103.6 254 39.0
TAR636G1420 Trochodendron aralioides HOM05D007467 ORTHO05D009441 2.5e-20 103.6 256 32.4
MBI04_g15581_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 7.2e-20 102.1 200 35.0
Nn1g00417 Nelumbo nucifera HOM05D007467 ORTHO05D009441 7.2e-20 102.1 310 30.0
TWI60G0745 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 9.4e-20 101.7 333 36.3
TAR629G1879 Trochodendron aralioides HOM05D007467 ORTHO05D009441 9.4e-20 101.7 291 40.2
Sabra03G0107500 Salix brachista HOM05D007467 ORTHO05D009441 1.2e-19 101.3 342 36.5
CANSAT21G0614 Cannabis sativa HOM05D007467 ORTHO05D009441 1.6e-19 100.9 300 37.7
PGR042G1595 Punica granatum HOM05D007467 ORTHO05D009441 2.1e-19 100.5 304 37.8
Hma1.2p1_0456F.1_g156740 Hydrangea macrophylla HOM05D007467 ORTHO05D009441 2.7e-19 100.1 284 37.3
Rhsim02G0253000 Rhododendron simsii HOM05D007467 ORTHO05D009441 4.7e-19 99.4 243 40.7
MBI04_g43054_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 6.1e-19 99.0 200 35.0
vmacro11497 Vaccinium macrocarpon HOM05D007467 ORTHO05D009441 6.1e-19 99.0 238 42.9
TWI15G0957 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 2.6e-17 93.6 337 30.0
Eucgr.E01052 Eucalyptus grandis HOM05D007467 ORTHO05D009441 3.7e-16 89.7 352 33.2
Potri.003G147900 Populus trichocarpa HOM05D007467 ORTHO05D009441 5.3e-15 85.9 260 41.2
MBI12_g21574_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 3.2e-12 76.6 263 36.5
SGA_v2.0_scaffold267G46175 Striga asiatica HOM05D007467 ORTHO05D009441 3.2e-12 76.6 283 33.2
Sed0003485 Sechium edule HOM05D007467 ORTHO05D009441 7.2e-12 75.5 283 35.0
CsaV3_5G001620 Cucumis sativus L. HOM05D007467 ORTHO05D009441 3.0e-10 70.1 320 32.2
AL7G48340 Arabidopsis lyrata HOM05D007467 ORTHO05D009441 8.8e-10 68.6 45 86.7
PSO782G5165 Papaver somniferum HOM05D007467 ORTHO05D009441 1.1e-09 68.2 278 34.9
MELO3C005789.2 Cucumis melo HOM05D007467 ORTHO05D009441 2.0e-09 67.4 321 32.4
Oeu022032.1 Olea europaea HOM05D007467 ORTHO05D009441 5.7e-09 65.9 126 40.5
CDE02G3312 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 7.5e-09 65.5 291 24.7
PSO478G5135 Papaver somniferum HOM05D007467 ORTHO05D009441 1.7e-08 64.3 282 31.9
Nn3g18852 Nelumbo nucifera HOM05D007467 ORTHO05D009441 2.2e-08 63.9 288 32.6
ClCG01G001480 Citrullus lanatus HOM05D007467 ORTHO05D009441 3.7e-08 63.2 241 35.7
ClCG00G001110 Citrullus lanatus HOM05D007467 ORTHO05D009441 6.3e-08 62.4 145 44.8
PGSC0003DMG400013732 Solanum tuberosum HOM05D007467 ORTHO05D009441 8.2e-08 62.0 50 62.0
Zm00001eb023700 Zea mays HOM05D007467 ORTHO05D009441 1.2e-06 58.2 272 32.7


User provided reference genes

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