Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 9.2e-36 152.9 71 100.0
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 2.9e-34 147.9 73 97.3
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 2.9e-34 147.9 73 97.3
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 2.9e-34 147.9 73 97.3
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 2.9e-34 147.9 73 97.3
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 6.6e-34 146.7 73 95.9
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 6.6e-34 146.7 73 94.5
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 8.6e-34 146.4 73 94.5
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 8.6e-34 146.4 73 94.5
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 8.6e-34 146.4 73 94.5
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 8.6e-34 146.4 73 94.5
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 8.6e-34 146.4 73 94.5
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 3.3e-33 144.4 73 94.5
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 1.2e-32 142.5 73 91.8
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 1.2e-32 142.5 73 93.2
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 4.4e-30 134.0 73 87.7
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 5.4e-28 127.1 72 83.3
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 7.0e-28 126.7 72 81.9
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 9.2e-28 126.3 72 80.6
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 1.2e-27 125.9 71 83.1
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.6e-27 125.6 71 83.1
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 7.8e-27 123.2 73 78.1
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 1.3e-26 122.5 71 80.3
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 3.9e-26 120.9 72 79.2
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 8.6e-26 119.8 72 77.8
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 8.6e-26 119.8 72 75.0
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 8.6e-26 119.8 72 75.0
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 8.6e-26 119.8 72 75.0
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 8.6e-26 119.8 72 73.6
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 1.1e-25 119.4 71 76.1
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 2.5e-25 118.2 72 76.4
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 2.5e-25 118.2 70 80.0
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 2.5e-25 118.2 72 73.6
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 2.5e-25 118.2 72 72.2
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 2.5e-25 118.2 72 72.2
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.5e-25 118.2 72 77.8
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 3.3e-25 117.9 72 77.8
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 5.6e-25 117.1 72 72.2
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 5.6e-25 117.1 71 77.5
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 5.6e-25 117.1 73 72.6
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 5.6e-25 117.1 72 70.8
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 5.6e-25 117.1 73 76.7
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 7.3e-25 116.7 71 74.6
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 7.3e-25 116.7 72 76.4
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 7.3e-25 116.7 72 76.4
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 9.5e-25 116.3 72 75.0
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 1.2e-24 115.9 73 72.6
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 1.2e-24 115.9 71 73.2
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 1.2e-24 115.9 72 72.2
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 2.1e-24 115.2 72 75.0
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 2.8e-24 114.8 72 75.0
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 2.8e-24 114.8 72 70.8
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 2.8e-24 114.8 69 76.8
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 3.6e-24 114.4 67 79.1
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 3.6e-24 114.4 72 70.8
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 3.6e-24 114.4 72 72.2
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 3.6e-24 114.4 72 73.6
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 4.7e-24 114.0 69 78.3
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 6.2e-24 113.6 66 80.3
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 6.2e-24 113.6 66 80.3
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 6.2e-24 113.6 66 80.3
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 6.2e-24 113.6 72 73.6
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 8.0e-24 113.2 71 76.1
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 8.0e-24 113.2 71 77.5
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 8.0e-24 113.2 72 72.2
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 8.0e-24 113.2 72 70.8
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 1.4e-23 112.5 72 70.8
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.4e-23 112.5 71 70.4
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 1.8e-23 112.1 72 69.4
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 2.3e-23 111.7 72 70.8
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 3.1e-23 111.3 71 69.0
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 3.1e-23 111.3 72 69.4
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 3.1e-23 111.3 72 72.2
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 3.1e-23 111.3 71 70.4
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 3.1e-23 111.3 72 72.2
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 4.0e-23 110.9 72 68.1
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 4.0e-23 110.9 71 71.8
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 4.0e-23 110.9 69 75.4
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 4.0e-23 110.9 72 72.2
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 5.2e-23 110.5 72 68.1
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 6.8e-23 110.2 69 72.5
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 6.8e-23 110.2 72 68.1
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 6.8e-23 110.2 72 68.1
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 6.8e-23 110.2 72 70.8
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 1.5e-22 109.0 72 68.1
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 1.5e-22 109.0 73 68.5
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 3.4e-22 107.8 66 77.3
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 3.4e-22 107.8 71 70.4
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.7e-21 105.5 72 63.9
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 1.7e-21 105.5 69 71.0
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 1.7e-21 105.5 69 71.0
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.9e-21 104.8 62 77.4
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 1.9e-20 102.1 58 79.3
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 4.1e-20 100.9 61 73.8
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 7.0e-20 100.1 72 59.7
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 9.2e-20 99.8 65 64.6
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 9.2e-20 99.8 65 64.6
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 9.2e-20 99.8 72 62.5
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 4.6e-19 97.4 72 62.5
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.0e-18 96.3 61 72.1
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.3e-18 95.9 72 59.7
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.3e-18 95.9 72 58.3
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.3e-18 95.9 72 58.3
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.7e-18 95.5 72 59.7
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.7e-18 95.5 72 59.7
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.9e-18 94.4 72 58.3
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 5.1e-18 94.0 72 61.1
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 6.6e-18 93.6 64 68.8
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 6.6e-18 93.6 72 61.1
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 6.6e-18 93.6 72 61.1
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 6.6e-18 93.6 72 61.1
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 8.6e-18 93.2 72 56.9
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.5e-17 92.4 72 55.6
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 5.6e-17 90.5 72 58.3
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 9.5e-17 89.7 69 55.1
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 3.6e-16 87.8 69 53.6
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 5.2e-15 84.0 70 51.4
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 6.8e-15 83.6 49 79.6
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 1.5e-14 82.4 61 60.7
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.2e-13 78.6 48 77.1
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 5.4e-12 73.9 58 60.3
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 4.4e-06 54.3 70 42.9


User provided reference genes

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