Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL239U10020 Arabidopsis lyrata HOM05D021309 ORTHO05D080349 6.5e-34 146.7 70 100.0
AL2G30970 Arabidopsis lyrata HOM05D021309 ORTHO05D079878 6.5e-34 146.7 70 100.0
AL2G30940 Arabidopsis lyrata HOM05D021309 ORTHO05D000101 1.8e-20 102.1 68 77.9
AL2G30960 Arabidopsis lyrata HOM05D021309 ORTHO05D000101 7.2e-17 90.1 53 81.1
AL2G30980 Arabidopsis lyrata HOM05D021309 ORTHO05D000101 1.0e-10 69.7 55 67.3
AL2G29700 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.4e-09 63.2 55 60.0
Carub.0002s1401 Capsella rubella HOM05D000171 ORTHO05D000101 2.1e-08 62.0 47 57.4
AL2G30490 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.6e-08 61.2 55 60.0
Sp3g03160 Schrenkiella parvula HOM05D000171 ORTHO05D000101 4.0e-07 57.8 44 56.8
Carub.0002s1709 Capsella rubella HOM05D000171 ORTHO05D000101 6.7e-07 57.0 55 47.3
AT1G70390 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 8.8e-07 56.6 55 58.2
AT1G70380 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.2e-06 56.2 52 55.8
Carub.0002s1707 Capsella rubella HOM05D000171 ORTHO05D000101 2.0e-06 55.5 48 56.2
Thhalv10022230m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.0e-06 55.5 54 48.1
CARHR064250 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.3e-06 54.7 45 57.8
FvH4_4g11831 Fragaria vesca HOM05D064558 ORTHO05D000039 3.3e-06 54.7 61 44.3
AL1G31740 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.5e-06 53.5 47 57.4
BNapus_Darmor_BZH_scaffold_78p00970 Brassica napus HOM05D000171 ORTHO05D000101 7.5e-06 53.5 51 51.0
BraA01t04509Z Brassica rapa HOM05D000171 ORTHO05D000101 9.7e-06 53.1 51 51.0


User provided reference genes

Program Settings