Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL219U10030 Arabidopsis lyrata HOM05D001348 ORTHO05D008393 3.3e-214 748.0 365 100.0
AL3G34160 Arabidopsis lyrata HOM05D001348 ORTHO05D008393 2.8e-213 745.0 365 99.5
AT3G20440 Arabidopsis thaliana HOM05D001348 ORTHO05D008393 1.1e-206 723.0 365 96.2
Carub.0003s2038 Capsella rubella HOM05D001348 ORTHO05D008393 2.8e-205 718.4 365 94.8
CARHR096150 Cardamine hirsuta HOM05D001348 ORTHO05D008393 1.2e-203 713.0 365 93.2
Thhalv10020019m.g Eutrema salsugineum HOM05D001348 ORTHO05D008393 3.8e-202 708.0 365 90.4
Sp3g18450 Schrenkiella parvula HOM05D001348 ORTHO05D008393 2.3e-199 698.7 367 91.8
BolC5t33106H Brassica oleracea HOM05D001348 ORTHO05D008393 2.5e-198 695.3 366 89.6
BcaC05g28331 Brassica carinata HOM05D001348 ORTHO05D008393 5.7e-198 694.1 366 89.3
C05p43900 Brassica napus HOM05D001348 ORTHO05D008393 5.7e-198 694.1 366 89.3
A05p28460 Brassica napus HOM05D001348 ORTHO05D008393 3.7e-197 691.4 366 89.1
BraA05t21725Z Brassica rapa HOM05D001348 ORTHO05D008393 1.1e-196 689.9 366 89.1
BcaB06g26109 Brassica carinata HOM05D001348 ORTHO05D008393 4.5e-195 684.5 367 88.8
Aa31LG8G7250 Aethionema arabicum HOM05D001348 ORTHO05D008393 2.0e-190 669.1 368 87.2
THA.LOC104817860 Tarenaya hassleriana HOM05D001348 ORTHO05D008393 3.2e-177 625.2 369 80.2
Cpa.g.sc12.269 Carica papaya HOM05D001348 ORTHO05D008393 4.2e-161 571.6 365 74.8
QL08p008747 Quercus lobata HOM05D001348 ORTHO05D008393 2.6e-158 562.4 366 74.9
QL09p024307 Quercus lobata HOM05D001348 ORTHO05D008393 8.3e-157 557.4 368 74.7
PGR031G0282 Punica granatum HOM05D001348 ORTHO05D008393 5.4e-156 554.7 376 69.7
Thecc.07G031600 Theobroma cacao HOM05D001348 ORTHO05D008393 1.6e-155 553.1 367 69.2
CiPaw.11G192600 Carya illinoinensis HOM05D001348 ORTHO05D008393 2.0e-155 552.7 373 71.6
Haze_09716 Corylus avellana HOM05D001348 ORTHO05D008393 5.9e-155 551.2 371 70.1
Duzib213G0150 Durio zibethinus HOM05D001348 ORTHO05D008393 3.9e-154 548.5 367 70.6
Prupe.4G219000 Prunus persica HOM05D001348 ORTHO05D008393 6.8e-151 537.7 365 68.8
CsaV3_7G021990 Cucumis sativus L. HOM05D001348 ORTHO05D008393 3.4e-150 535.4 366 68.3
Gohir.A04G012800 Gossypium hirsutum HOM05D001348 ORTHO05D008393 1.7e-149 533.1 370 68.1
Gorai.009G441800 Gossypium raimondii HOM05D001348 ORTHO05D008393 1.7e-149 533.1 370 68.4
MD11G1212700 Malus domestica HOM05D001348 ORTHO05D008393 2.9e-149 532.3 365 69.3
GSVIVG01037695001 Vitis vinifera HOM05D001348 ORTHO05D008393 2.9e-149 532.3 369 68.6
ClCG09G010970 Citrullus lanatus HOM05D001348 ORTHO05D008393 6.4e-149 531.2 367 67.8
Ciclev10007401m.g Citrus clementina HOM05D001348 ORTHO05D008393 6.4e-149 531.2 369 68.6
RcHm_v2.0_Chr5g0040901 Rosa chinensis HOM05D001348 ORTHO05D008393 4.1e-148 528.5 365 67.4
FAN21G3120 Fragaria x ananassa HOM05D001348 ORTHO05D008393 7.0e-148 527.7 366 67.2
Sed0016477 Sechium edule HOM05D001348 ORTHO05D008393 1.6e-147 526.6 367 67.8
FvH4_3g23220 Fragaria vesca HOM05D001348 ORTHO05D008393 3.5e-147 525.4 366 66.9
FAN16G1777 Fragaria x ananassa HOM05D001348 ORTHO05D008393 6.0e-147 524.6 366 66.7
CANSAT78G2496 Cannabis sativa HOM05D001348 ORTHO05D008393 7.8e-147 524.2 370 69.5
TWI38G1719 Tripterygium wilfordii HOM05D001348 ORTHO05D008393 1.0e-146 523.9 367 66.5
FAN25G0826 Fragaria x ananassa HOM05D001348 ORTHO05D008393 3.9e-146 521.9 366 66.4
FAN25G0105 Fragaria x ananassa HOM05D001348 ORTHO05D008393 4.3e-145 518.5 366 66.1
Eucgr.F03487 Eucalyptus grandis HOM05D001348 ORTHO05D008393 2.8e-144 515.8 302 75.8
ECA240G2960 Erigeron canadensis HOM05D001348 ORTHO05D008393 3.6e-144 515.4 301 77.4
Dinv40782 Davidia involucrata HOM05D001348 ORTHO05D008393 4.7e-144 515.0 302 76.2
SGA_v2.0_scaffold363G49944 Striga asiatica HOM05D001348 ORTHO05D008393 5.2e-143 511.5 380 63.4
CSS0031743 Camellia sinensis var. sinensis HOM05D001348 ORTHO05D008393 6.8e-143 511.1 372 65.3
CSS0015657 Camellia sinensis var. sinensis HOM05D001348 ORTHO05D008393 2.9e-141 505.8 364 65.9
vmacro09698 Vaccinium macrocarpon HOM05D001348 ORTHO05D008393 1.9e-140 503.1 302 74.5
RhsimUnG0248600 Rhododendron simsii HOM05D001348 ORTHO05D008393 3.2e-140 502.3 308 74.0
Lsat_1_v5_gn_9_92360 Lactuca sativa HOM05D001348 ORTHO05D008393 4.1e-140 501.9 300 75.3
Lj1C878T2 Lonicera japonica HOM05D001348 ORTHO05D008393 5.4e-140 501.5 372 65.1
Actinidia10744 Actinidia chinensis HOM05D001348 ORTHO05D008393 7.1e-140 501.1 302 73.8
MSTRG.14452 Avicennia marina HOM05D001348 ORTHO05D008393 7.1e-140 501.1 302 73.8
Nitab4.5_0008150g0010 Nicotiana tabacum HOM05D001348 ORTHO05D008393 3.0e-138 495.7 377 63.1
Medtr3g053220 Medicago truncatula HOM05D001348 ORTHO05D008393 6.6e-138 494.6 302 75.2
Sopen07g033020 Solanum pennellii HOM05D001348 ORTHO05D008393 6.6e-138 494.6 371 62.3
DCAR_016718 Daucus carota HOM05D001348 ORTHO05D008393 8.6e-138 494.2 327 69.1
Potri.001G359200 Populus trichocarpa HOM05D001348 ORTHO05D008393 8.6e-138 494.2 381 64.8
TPR.G14440 Trifolium pratense HOM05D001348 ORTHO05D008393 1.1e-137 493.8 302 76.2
MELO3C013141.2 Cucumis melo HOM05D001348 ORTHO05D008393 3.3e-137 492.3 366 64.8
TAR624G0107 Trochodendron aralioides HOM05D001348 ORTHO05D008393 3.3e-137 492.3 380 61.6
Cc05_g14070 Coffea canephora HOM05D001348 ORTHO05D008393 1.2e-136 490.3 302 73.2
Nn1g07231 Nelumbo nucifera HOM05D001348 ORTHO05D008393 1.6e-136 490.0 324 67.6
Aqoxy1G03056 Aquilegia oxysepala HOM05D001348 ORTHO05D008393 1.8e-135 486.5 327 67.9
Solyc07g064830.3 Solanum lycopersicum HOM05D001348 ORTHO05D008393 3.1e-135 485.7 371 61.7
Psat5g173680 Pisum sativum HOM05D001348 ORTHO05D008393 5.2e-135 485.0 337 68.8
Peaxi162Scf00235g00519 Petunia axillaris HOM05D001348 ORTHO05D008393 3.4e-134 482.3 336 64.3
Lj6g0019683 Lotus japonicus HOM05D001348 ORTHO05D008393 5.8e-134 481.5 374 63.9
PSO478G3826 Papaver somniferum HOM05D001348 ORTHO05D008393 7.6e-134 481.1 301 69.1
MBI10_g29397_MAGBIO Magnolia biondii HOM05D001348 ORTHO05D008393 1.1e-132 477.2 325 68.0
Hund02021 Selenicereus undatus HOM05D001348 ORTHO05D008393 1.1e-132 477.2 297 72.4
Migut.H01807 Erythranthe guttata HOM05D001348 ORTHO05D008393 1.9e-132 476.5 338 65.1
arahy.Tifrunner.gnm1.ann1.IC3HGI Arachis hypogaea HOM05D001348 ORTHO05D008393 2.4e-132 476.1 374 61.0
Glyma.18G092600 Glycine max HOM05D001348 ORTHO05D008393 1.3e-130 470.3 369 60.2
Lalb_Chr15g0081511 Lupinus albus HOM05D001348 ORTHO05D008393 1.3e-130 470.3 302 69.2
ATR0712G161 Amborella trichopoda HOM05D001348 ORTHO05D008393 1.5e-129 466.8 302 69.2
CDE04G2814 Ceratophyllum demersum HOM05D001348 ORTHO05D008393 2.5e-129 466.1 297 71.0
Phvul.006G047000 Phaseolus vulgaris HOM05D001348 ORTHO05D008393 4.3e-129 465.3 302 69.5
AUR62020390 Chenopodium quinoa HOM05D001348 ORTHO05D008393 2.8e-128 462.6 331 65.0
Gohir.D05G373100 Gossypium hirsutum HOM05D001348 ORTHO05D008393 3.6e-128 462.2 253 81.0
AUR62015829 Chenopodium quinoa HOM05D001348 ORTHO05D008393 2.6e-126 456.1 301 69.4
VMungo0540G0045 Vigna mungo HOM05D001348 ORTHO05D008393 3.8e-125 452.2 372 59.1
Manes.03G133300 Manihot esculenta HOM05D001348 ORTHO05D008393 4.9e-125 451.8 257 78.2
COL.COLO4_09699 Corchorus olitorius HOM05D001348 ORTHO05D008393 1.1e-124 450.7 244 80.7
Nitab4.5_0000328g0120 Nicotiana tabacum HOM05D001348 ORTHO05D008393 9.3e-124 447.6 381 58.8
EL10Ac4g07758 Beta vulgaris HOM05D001348 ORTHO05D008393 2.8e-120 436.0 331 63.4
arahy.Tifrunner.gnm1.ann1.QR17ZP Arachis hypogaea HOM05D001348 ORTHO05D008393 1.1e-119 434.1 266 72.9
Ca_26139_v3 Cicer arietinum L. HOM05D001348 ORTHO05D008393 4.0e-119 432.2 257 76.3
Os06g0367100 Oryza sativa ssp. japonica HOM05D001348 ORTHO05D008393 4.0e-119 432.2 297 67.0
HPP92_025429 Vanilla planifolia HOM05D001348 ORTHO05D008393 5.3e-119 431.8 357 57.1
unitig_747.g21692 Utricularia gibba HOM05D001348 ORTHO05D008393 4.4e-118 428.7 300 64.3
Ah.04g166040 Amaranthus hybridus HOM05D001348 ORTHO05D008393 5.8e-118 428.3 282 69.5
Zm00001eb357830 Zea mays HOM05D001348 ORTHO05D008393 4.2e-116 422.2 297 65.0
HanXRQChr03g0076721 Helianthus annuus HOM05D001348 ORTHO05D008393 1.2e-115 420.6 300 65.7
Sc16g0005840 Simmondsia chinensis HOM05D001348 ORTHO05D008393 7.6e-102 374.8 228 75.0
SEGI_09228 Sequoiadendron giganteum HOM05D001348 ORTHO05D008393 2.1e-75 287.0 212 59.9
SEGI_15925 Sequoiadendron giganteum HOM05D001348 ORTHO05D008393 2.1e-75 287.0 212 59.9
AagrBONN_evm.TU.Sc2ySwM_368.3367 Anthoceros agrestis HOM05D001348 ORTHO05D008393 3.2e-68 263.1 347 40.3
Pp3c1_1810 Physcomitrium patens HOM05D001348 ORTHO05D008393 7.5e-65 251.9 340 39.7
SMO361G0691 Selaginella moellendorffii HOM05D001348 ORTHO05D008393 4.7e-59 232.6 278 43.2
Mapoly0160s0012 Marchantia polymorpha HOM05D001348 ORTHO05D008393 3.7e-56 223.0 425 33.9
CAN.G337.70 Capsicum annuum HOM05D001348 ORTHO05D008393 5.0e-45 186.0 124 68.5
Cc05_g15390 Coffea canephora HOM05D001348 ORTHO05D008393 5.4e-39 166.0 261 36.8
CBR_g40635 Chara braunii HOM05D001348 ORTHO05D008393 5.8e-17 92.8 105 41.9
DCAR_031790 Daucus carota HOM05D001348 ORTHO05D008393 1.1e-15 88.6 42 85.7
Actinidia33711 Actinidia chinensis HOM05D001348 ORTHO05D008393 1.4e-15 88.2 67 59.7
EL10As2g23268 Beta vulgaris HOM05D001348 ORTHO05D008393 8.4e-08 62.4 74 43.2
Potri.006G115100 Populus trichocarpa HOM05D001348 ORTHO05D002788 5.4e-07 59.7 101 31.7
SGA_v2.0_scaffold13G06771 Striga asiatica HOM05D001348 ORTHO05D002788 1.2e-06 58.5 91 31.9
MSTRG.5817 Avicennia marina HOM05D001348 ORTHO05D002788 1.6e-06 58.2 95 30.5
Gohir.A01G207900 Gossypium hirsutum HOM05D001348 ORTHO05D002788 2.1e-06 57.8 91 34.1
Gohir.D01G197300 Gossypium hirsutum HOM05D001348 ORTHO05D002788 2.1e-06 57.8 91 34.1
Manes.08G022400 Manihot esculenta HOM05D001348 ORTHO05D002788 2.1e-06 57.8 101 33.7
Duzib106G0218 Durio zibethinus HOM05D001348 ORTHO05D002788 2.7e-06 57.4 101 29.7
Actinidia10394 Actinidia chinensis HOM05D001348 ORTHO05D002788 3.5e-06 57.0 103 31.1
Sabra06G0090000 Salix brachista HOM05D001348 ORTHO05D002788 4.6e-06 56.6 101 30.7
A10p32450 Brassica napus HOM05D001348 ORTHO05D002788 6.0e-06 56.2 93 32.3
BraA10t45285Z Brassica rapa HOM05D001348 ORTHO05D002788 6.0e-06 56.2 93 32.3
THA.LOC104816366 Tarenaya hassleriana HOM05D001348 ORTHO05D002788 6.0e-06 56.2 95 30.5
Manes.09G058676 Manihot esculenta HOM05D001348 ORTHO05D002788 7.8e-06 55.8 101 31.7
Medtr7g104080 Medicago truncatula HOM05D001348 ORTHO05D002788 7.8e-06 55.8 99 32.3
PSO339G5175 Papaver somniferum HOM05D001348 ORTHO05D002788 7.8e-06 55.8 123 27.6
PSO384G3813 Papaver somniferum HOM05D001348 ORTHO05D002788 7.8e-06 55.8 123 27.6
TPR.G19537 Trifolium pratense HOM05D001348 ORTHO05D002788 7.8e-06 55.8 99 32.3


User provided reference genes

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