Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL203U10010 Arabidopsis lyrata HOM05D000554 ORTHO05D011695 2.3e-73 278.9 149 100.0
AL8G40950 Arabidopsis lyrata HOM05D000554 ORTHO05D011695 2.2e-71 272.3 149 98.7
AT5G63730 Arabidopsis thaliana HOM05D000554 ORTHO05D011695 6.6e-60 234.2 149 80.5
Carub.0008s2450 Capsella rubella HOM05D000554 ORTHO05D011695 6.2e-50 201.1 153 75.8
CARHR277660 Cardamine hirsuta HOM05D000554 ORTHO05D011695 2.2e-39 166.0 150 61.3
AL8G40980 Arabidopsis lyrata HOM05D000554 ORTHO05D011695 1.1e-35 153.7 149 57.7
BcaB02g09734 Brassica carinata HOM05D000554 ORTHO05D011695 4.3e-35 151.8 152 59.2
AL8G40970 Arabidopsis lyrata HOM05D000554 ORTHO05D011695 5.6e-35 151.4 150 57.3
Carub.0008s2453 Capsella rubella HOM05D000554 ORTHO05D011695 9.5e-35 150.6 157 52.2
A06p30330 Brassica napus HOM05D000554 ORTHO05D011695 2.8e-34 149.1 149 57.7
AT5G63750 Arabidopsis thaliana HOM05D000554 ORTHO05D011695 3.6e-34 148.7 147 57.1
BcaC01g02625 Brassica carinata HOM05D000554 ORTHO05D011695 6.2e-34 147.9 149 56.4
C03p62700 Brassica napus HOM05D000554 ORTHO05D011695 6.2e-34 147.9 149 56.4
CARHR277670 Cardamine hirsuta HOM05D000554 ORTHO05D011695 1.8e-33 146.4 155 52.3
Carub.0008s2452 Capsella rubella HOM05D000554 ORTHO05D011695 9.9e-32 140.6 150 53.3
C03p62690 Brassica napus HOM05D000554 ORTHO05D011695 1.3e-31 140.2 148 50.0
BolC3t18526H Brassica oleracea HOM05D000554 ORTHO05D011695 1.7e-31 139.8 148 50.0
BcaB02g09733 Brassica carinata HOM05D000554 ORTHO05D011695 9.2e-30 134.0 152 52.6
BcaC01g02624 Brassica carinata HOM05D000554 ORTHO05D011695 2.7e-29 132.5 148 48.6
A06p30340 Brassica napus HOM05D000554 ORTHO05D011695 6.6e-28 127.9 149 53.7
BraA06t25982Z Brassica rapa HOM05D000554 ORTHO05D011695 6.6e-28 127.9 149 53.7
BcaB05g21568 Brassica carinata HOM05D000554 ORTHO05D011030 7.1e-22 107.8 124 48.4
A06p21040 Brassica napus HOM05D000554 ORTHO05D011030 1.6e-21 106.7 148 41.2
BraA06t25191Z Brassica rapa HOM05D000554 ORTHO05D011030 2.7e-21 105.9 148 41.2
AL6G19480 Arabidopsis lyrata HOM05D000554 ORTHO05D011030 1.0e-20 104.0 149 42.3
BcaB01g01036 Brassica carinata HOM05D000554 ORTHO05D011030 1.0e-20 104.0 148 43.2
BcaC01g01932 Brassica carinata HOM05D000554 ORTHO05D011030 1.0e-20 104.0 148 39.2
A06p21240 Brassica napus HOM05D000554 ORTHO05D011030 1.0e-20 104.0 148 41.2
C03p70200 Brassica napus HOM05D000554 ORTHO05D011030 1.0e-20 104.0 148 39.2
C03p70440 Brassica napus HOM05D000554 ORTHO05D011030 1.0e-20 104.0 148 39.2
BolC3t19275H Brassica oleracea HOM05D000554 ORTHO05D011030 1.0e-20 104.0 148 39.2
BraA06t25213Z Brassica rapa HOM05D000554 ORTHO05D011030 1.0e-20 104.0 148 40.5
Sp2g26830 Schrenkiella parvula HOM05D000554 ORTHO05D011695 1.0e-20 104.0 74 67.6
Carub.0006s0770 Capsella rubella HOM05D000554 ORTHO05D011030 2.3e-20 102.8 148 43.2
BcaB01g01043 Brassica carinata HOM05D000554 ORTHO05D011030 3.0e-20 102.4 148 41.9
BolC3t19303H Brassica oleracea HOM05D000554 ORTHO05D011030 6.6e-20 101.3 148 38.5
Thhalv10015828m.g Eutrema salsugineum HOM05D000554 ORTHO05D011030 6.6e-20 101.3 133 42.9
Thhalv10013280m.g Eutrema salsugineum HOM05D000554 ORTHO05D011030 1.1e-19 100.5 146 41.8
BcaB01g01068 Brassica carinata HOM05D000554 ORTHO05D011030 1.9e-19 99.8 148 39.9
AT5G08730 Arabidopsis thaliana HOM05D000554 ORTHO05D011030 3.3e-19 99.0 149 42.3
BcaC01g01951 Brassica carinata HOM05D000554 ORTHO05D011030 3.3e-19 99.0 127 43.3
Sp6g34140 Schrenkiella parvula HOM05D000554 ORTHO05D011030 2.1e-18 96.3 133 40.6
THA.LOC104819354 Tarenaya hassleriana HOM05D000554 ORTHO05D011030 1.8e-17 93.2 150 41.3
BcaB05g21569 Brassica carinata HOM05D000554 ORTHO05D011030 2.4e-17 92.8 151 39.1
BcaB01g01066 Brassica carinata HOM05D000554 ORTHO05D011030 3.1e-17 92.4 148 36.5
BcaC03g13241 Brassica carinata HOM05D000554 ORTHO05D011030 1.2e-16 90.5 150 37.3
BolC2t06333H Brassica oleracea HOM05D000554 ORTHO05D011030 1.2e-16 90.5 150 37.3
BcaC03g18222 Brassica carinata HOM05D000554 ORTHO05D011695 2.6e-16 89.4 82 58.5
C02p62910 Brassica napus HOM05D000554 ORTHO05D011695 2.6e-16 89.4 82 58.5
BolC2t12365H Brassica oleracea HOM05D000554 ORTHO05D011695 2.6e-16 89.4 82 58.5
BraA02t04967Z Brassica rapa HOM05D000554 ORTHO05D011030 3.4e-16 89.0 150 37.3
BraA02t09219Z Brassica rapa HOM05D000554 ORTHO05D011695 7.6e-16 87.8 72 62.5
BcaB08g37230 Brassica carinata HOM05D002593 ORTHO05D006476 1.7e-15 86.7 141 36.9
C02p03730 Brassica napus HOM05D000554 ORTHO05D011030 1.7e-15 86.7 150 37.3
BcaB07g29702 Brassica carinata HOM05D000554 ORTHO05D011695 2.9e-15 85.9 78 55.1
A02p42960 Brassica napus HOM05D000554 ORTHO05D011695 2.9e-15 85.9 72 61.1
BolC9t59573H Brassica oleracea HOM05D000554 ORTHO05D011030 8.4e-15 84.3 141 39.0
BcaB01g01030 Brassica carinata HOM05D000554 ORTHO05D011030 5.4e-14 81.6 69 55.1
BcaB01g01034 Brassica carinata HOM05D000554 ORTHO05D011030 9.3e-14 80.9 128 38.3
Carub.0008s2451 Capsella rubella HOM05D000554 ORTHO05D023611 1.2e-13 80.5 236 32.6
A10p28050 Brassica napus HOM05D000554 ORTHO05D011030 1.6e-13 80.1 139 37.4
BcaB01g01032 Brassica carinata HOM05D000554 ORTHO05D011030 3.5e-13 79.0 148 36.5
BraA10t44854Z Brassica rapa HOM05D000554 ORTHO05D011030 6.0e-13 78.2 138 35.5
BcaB05g23549 Brassica carinata HOM05D002776 ORTHO05D091522 1.0e-12 77.4 78 50.0
CARHR204280 Cardamine hirsuta HOM05D000554 ORTHO05D011030 2.3e-12 76.3 129 35.7
AT5G63760 Arabidopsis thaliana HOM05D000554 ORTHO05D011695 3.9e-12 75.5 87 48.3
Carub.0007s2968 Capsella rubella HOM05D000554 ORTHO05D023611 1.1e-11 73.9 244 29.9
Sp5g15490 Schrenkiella parvula HOM05D000554 ORTHO05D011030 4.3e-11 72.0 112 36.6
Aa31LG3G17830 Aethionema arabicum HOM05D000554 ORTHO05D011030 1.3e-10 70.5 223 28.3
AL8G40960 Arabidopsis lyrata HOM05D000554 ORTHO05D023611 2.0e-08 63.2 38 71.1
AT5G63740 Arabidopsis thaliana HOM05D000554 ORTHO05D023611 2.6e-08 62.8 39 69.2
Hund09514 Selenicereus undatus HOM05D000554 ORTHO05D000860 9.3e-06 54.3 144 25.0


User provided reference genes

Program Settings