Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G67510 Arabidopsis lyrata HOM05D004289 ORTHO05D005141 7.6e-50 200.3 108 100.0
AT1G57765 Arabidopsis thaliana HOM05D004289 ORTHO05D005141 8.2e-44 180.3 108 89.8
Carub.0002s0680 Capsella rubella HOM05D004289 ORTHO05D005141 1.9e-37 159.1 109 83.5
Sp2g05730 Schrenkiella parvula HOM05D004289 ORTHO05D005141 3.3e-37 158.3 97 87.6
CARHR054450 Cardamine hirsuta HOM05D004289 ORTHO05D005141 2.2e-36 155.6 108 80.6
Thhalv10023770m.g Eutrema salsugineum HOM05D004289 ORTHO05D005141 8.2e-36 153.7 102 81.4
Sp1g08260 Schrenkiella parvula HOM05D004289 ORTHO05D005141 1.1e-35 153.3 108 78.7
BcaB03g13311 Brassica carinata HOM05D004289 ORTHO05D005141 5.9e-34 147.5 108 76.9
Thhalv10009166m.g Eutrema salsugineum HOM05D004289 ORTHO05D005141 7.6e-34 147.1 98 80.6
CARHR009620 Cardamine hirsuta HOM05D004289 ORTHO05D005141 3.8e-33 144.8 108 75.9
AL1G20190 Arabidopsis lyrata HOM05D004289 ORTHO05D005141 1.4e-32 142.9 108 75.0
AT1G09645 Arabidopsis thaliana HOM05D004289 ORTHO05D005141 4.2e-32 141.4 108 75.0
Aa31LG1G5340 Aethionema arabicum HOM05D004289 ORTHO05D005141 7.2e-32 140.6 97 77.3
BcaC07g41867 Brassica carinata HOM05D004289 ORTHO05D005141 1.2e-31 139.8 108 73.1
C08p49340 Brassica napus HOM05D004289 ORTHO05D005141 1.2e-31 139.8 108 73.1
C08p13100 Brassica napus HOM05D004289 ORTHO05D005141 6.1e-31 137.5 93 79.6
C05p07700 Brassica napus HOM05D004289 ORTHO05D005141 1.8e-30 136.0 97 79.4
THA.LOC104816824 Tarenaya hassleriana HOM05D004289 ORTHO05D005141 3.9e-30 134.8 98 79.6
THA.LOC104823700 Tarenaya hassleriana HOM05D004289 ORTHO05D005141 3.9e-30 134.8 98 75.5
Carub.0001s0900 Capsella rubella HOM05D004289 ORTHO05D005141 1.3e-28 129.8 108 72.2
BolC8t52471H Brassica oleracea HOM05D004289 ORTHO05D005141 2.2e-28 129.0 118 66.1
BraA06t23844Z Brassica rapa HOM05D004289 ORTHO05D005141 8.2e-28 127.1 107 72.0
BolC8t48938H Brassica oleracea HOM05D002143 ORTHO05D002260 2.0e-26 122.5 80 82.5
BraA08t35355Z Brassica rapa HOM05D002143 ORTHO05D002260 1.3e-25 119.8 80 80.0
A06p06330 Brassica napus HOM05D004289 ORTHO05D005141 5.0e-25 117.9 131 58.8
BolC5t29521H Brassica oleracea HOM05D004289 ORTHO05D005141 6.5e-25 117.5 126 60.3
MD08G1244000 Malus domestica HOM05D004289 ORTHO05D005141 1.9e-24 115.9 93 67.7
Thecc.02G016600 Theobroma cacao HOM05D004289 ORTHO05D005141 1.9e-24 115.9 93 71.0
THA.LOC104820335 Tarenaya hassleriana HOM05D004289 ORTHO05D005141 2.5e-24 115.5 96 67.7
Gohir.A03G215700 Gossypium hirsutum HOM05D004289 ORTHO05D005141 1.6e-23 112.8 93 67.7
Duzib052G0484 Durio zibethinus HOM05D004289 ORTHO05D005141 3.6e-23 111.7 108 63.0
Aa31LG2G11220 Aethionema arabicum HOM05D004289 ORTHO05D005141 4.7e-23 111.3 102 64.7
CSS0038337 Camellia sinensis var. sinensis HOM05D004289 ORTHO05D005141 6.1e-23 110.9 94 64.9
MD15G1438300 Malus domestica HOM05D004289 ORTHO05D005141 1.0e-22 110.2 92 66.3
Gohir.D02G237200 Gossypium hirsutum HOM05D004289 ORTHO05D005141 1.8e-22 109.4 108 62.0
Gorai.005G265800 Gossypium raimondii HOM05D004289 ORTHO05D005141 1.8e-22 109.4 108 62.0
COL.COLO4_17708 Corchorus olitorius HOM05D004289 ORTHO05D005141 3.9e-22 108.2 108 61.1
Prupe.1G581300 Prunus persica HOM05D004289 ORTHO05D005141 1.1e-21 106.7 97 61.9
CSS0038950 Camellia sinensis var. sinensis HOM05D004289 ORTHO05D005141 5.7e-21 104.4 93 60.2
Lsat_1_v5_gn_5_104580 Lactuca sativa HOM05D004289 ORTHO05D005141 1.3e-20 103.2 94 61.7
GSVIVG01023230001 Vitis vinifera HOM05D004289 ORTHO05D005141 1.7e-20 102.8 94 66.0
ECA236G0617 Erigeron canadensis HOM05D004289 ORTHO05D005141 2.8e-20 102.1 93 59.1
Manes.10G116200 Manihot esculenta HOM05D004289 ORTHO05D005141 2.8e-20 102.1 109 57.8
Actinidia38989 Actinidia chinensis HOM05D004289 ORTHO05D005141 3.1e-19 98.6 95 61.1
TAR381G0514 Trochodendron aralioides HOM05D004289 ORTHO05D005141 3.1e-19 98.6 98 57.1
CiPaw.04G012500 Carya illinoinensis HOM05D004289 ORTHO05D005141 1.2e-18 96.7 93 60.2
TAR628G0462 Trochodendron aralioides HOM05D004289 ORTHO05D005141 2.0e-18 95.9 94 55.3
CiPaw.03G018600 Carya illinoinensis HOM05D004289 ORTHO05D005141 2.6e-18 95.5 109 52.3
Ciclev10003782m.g Citrus clementina HOM05D004289 ORTHO05D005141 2.6e-18 95.5 80 70.0
Sc16g0004250 Simmondsia chinensis HOM05D004289 ORTHO05D005141 3.4e-18 95.1 98 59.2
Potri.004G226100 Populus trichocarpa HOM05D004289 ORTHO05D005141 1.0e-17 93.6 94 56.4
Prupe.1G549500 Prunus persica HOM05D004289 ORTHO05D005141 1.0e-17 93.6 91 57.1
QL09p003196 Quercus lobata HOM05D004289 ORTHO05D005141 1.0e-17 93.6 97 54.6
QL09p004791 Quercus lobata HOM05D004289 ORTHO05D005141 1.0e-17 93.6 97 54.6
Manes.07G025900 Manihot esculenta HOM05D004289 ORTHO05D005141 1.3e-17 93.2 94 60.6
Nitab4.5_0029023g0010 Nicotiana tabacum HOM05D004289 ORTHO05D005141 1.3e-17 93.2 104 52.9
PSO170G0294 Papaver somniferum HOM05D004289 ORTHO05D005141 1.3e-17 93.2 101 54.5
Ah.02g128340 Amaranthus hybridus HOM05D004289 ORTHO05D005141 1.7e-17 92.8 93 59.1
Sabra01G0171700 Salix brachista HOM05D004289 ORTHO05D005141 1.7e-17 92.8 94 55.3
Eucgr.I02780 Eucalyptus grandis HOM05D004289 ORTHO05D005141 2.9e-17 92.0 94 60.6
Sopen11g012540 Solanum pennellii HOM05D004289 ORTHO05D005141 3.8e-17 91.7 91 56.0
VMungo0540G0867 Vigna mungo HOM05D004289 ORTHO05D005141 6.5e-17 90.9 108 50.0
Aqoxy5G00854 Aquilegia oxysepala HOM05D004289 ORTHO05D005141 8.5e-17 90.5 103 52.4
AUR62028456 Chenopodium quinoa HOM05D004289 ORTHO05D005141 8.5e-17 90.5 96 57.3
PSO017G2658 Papaver somniferum HOM05D004289 ORTHO05D005141 1.1e-16 90.1 100 53.0
Sabra19G0088300 Salix brachista HOM05D004289 ORTHO05D005141 1.1e-16 90.1 94 51.1
MELO3C016488.2 Cucumis melo HOM05D004289 ORTHO05D005141 1.4e-16 89.7 89 57.3
Duzib248G0764 Durio zibethinus HOM05D004289 ORTHO05D005141 1.4e-16 89.7 108 58.3
MD08G1216400 Malus domestica HOM05D004289 ORTHO05D005141 1.4e-16 89.7 93 57.0
Peaxi162Scf00688g00334 Petunia axillaris HOM05D004289 ORTHO05D005141 1.4e-16 89.7 95 52.6
GSVIVG01025943001 Vitis vinifera HOM05D004289 ORTHO05D005141 1.4e-16 89.7 93 51.6
MBI06_g06694_MAGBIO Magnolia biondii HOM05D004289 ORTHO05D005141 1.9e-16 89.4 96 52.1
TWI23G1156 Tripterygium wilfordii HOM05D004289 ORTHO05D005141 2.5e-16 89.0 93 51.6
Zm00001eb288300 Zea mays HOM05D004289 ORTHO05D005141 2.5e-16 89.0 93 55.9
Migut.B00750 Erythranthe guttata HOM05D004289 ORTHO05D005141 3.2e-16 88.6 108 53.7
Nitab4.5_0005169g0070 Nicotiana tabacum HOM05D004289 ORTHO05D005141 3.2e-16 88.6 81 58.0
TPR.G34161 Trifolium pratense HOM05D004289 ORTHO05D005141 3.2e-16 88.6 95 57.9
HanXRQChr06g0182751 Helianthus annuus HOM05D004289 ORTHO05D005141 4.2e-16 88.2 95 53.7
Medtr4g032200 Medicago truncatula HOM05D004289 ORTHO05D005141 4.2e-16 88.2 95 53.7
Potri.019G077100 Populus trichocarpa HOM05D004289 ORTHO05D005141 4.2e-16 88.2 93 51.6
Nn5g27488 Nelumbo nucifera HOM05D004289 ORTHO05D005141 5.5e-16 87.8 94 52.1
AUR62042238 Chenopodium quinoa HOM05D004289 ORTHO05D005141 7.2e-16 87.4 94 55.3
SGA_v2.0_scaffold131G34372 Striga asiatica HOM05D004289 ORTHO05D005141 7.2e-16 87.4 109 54.1
MD05G1210300 Malus domestica HOM05D004289 ORTHO05D005141 9.4e-16 87.0 93 54.8
TWI14G0848 Tripterygium wilfordii HOM05D004289 ORTHO05D005141 9.4e-16 87.0 94 51.1
EL10Ac6g14140 Beta vulgaris HOM05D004289 ORTHO05D005141 1.2e-15 86.7 74 63.5
Lsat_1_v5_gn_9_119620 Lactuca sativa HOM05D004289 ORTHO05D005141 1.2e-15 86.7 94 54.3
Nitab4.5_0000016g0420 Nicotiana tabacum HOM05D004289 ORTHO05D005141 1.2e-15 86.7 107 48.6
PGSC0003DMG400025523 Solanum tuberosum HOM05D004289 ORTHO05D005141 1.2e-15 86.7 85 55.3
Atru.chr6.550 Acer truncatum HOM05D004289 ORTHO05D005141 2.1e-15 85.9 57 75.4
RcHm_v2.0_Chr7g0220501 Rosa chinensis HOM05D004289 ORTHO05D005141 2.1e-15 85.9 98 55.1
Migut.C01335 Erythranthe guttata HOM05D004289 ORTHO05D005141 3.6e-15 85.1 93 53.8
Phvul.006G220000 Phaseolus vulgaris HOM05D004289 ORTHO05D005141 4.7e-15 84.7 103 49.5
HPP92_002618 Vanilla planifolia HOM05D004289 ORTHO05D005141 6.1e-15 84.3 97 48.5
Oeu058640.2 Olea europaea HOM05D004289 ORTHO05D005141 8.0e-15 84.0 83 59.0
Potri.003G005400 Populus trichocarpa HOM05D004289 ORTHO05D005141 8.0e-15 84.0 95 52.6
HPP92_002677 Vanilla planifolia HOM05D004289 ORTHO05D005141 1.0e-14 83.6 97 47.4
FAN10G0807 Fragaria x ananassa HOM05D004289 ORTHO05D005141 1.4e-14 83.2 104 51.9
MD15G1403500 Malus domestica HOM05D004289 ORTHO05D005141 1.4e-14 83.2 92 52.2
Os05g0419600 Oryza sativa ssp. japonica HOM05D004289 ORTHO05D005141 1.4e-14 83.2 93 53.8
vmacro19856 Vaccinium macrocarpon HOM05D004289 ORTHO05D005141 1.8e-14 82.8 80 53.8
FAN13G3078 Fragaria x ananassa HOM05D004289 ORTHO05D005141 3.9e-14 81.6 89 55.1
MELO3C022208.2 Cucumis melo HOM05D004289 ORTHO05D005141 5.2e-14 81.3 93 50.5
Glyma.08G237900 Glycine max HOM05D004289 ORTHO05D005141 6.7e-14 80.9 102 52.0
Phvul.011G000300 Phaseolus vulgaris HOM05D004289 ORTHO05D005141 6.7e-14 80.9 100 44.0
QL02p100957 Quercus lobata HOM05D004289 ORTHO05D005141 8.8e-14 80.5 103 48.5
FvH4_5g32580 Fragaria vesca HOM05D004289 ORTHO05D005141 1.1e-13 80.1 89 52.8
Cfa008122 Carpinus fangiana HOM05D000042 ORTHO05D000028 1.5e-13 79.7 74 59.5
MBI17_g24966_MAGBIO Magnolia biondii HOM05D004289 ORTHO05D005141 2.0e-13 79.3 83 53.0
unitig_748.g7732 Utricularia gibba HOM05D004289 ORTHO05D005141 2.0e-13 79.3 82 52.4
SalBow7G0958 Salvia bowleyana HOM05D004289 ORTHO05D005141 5.7e-13 77.8 76 53.9
ClCG08G000420 Citrullus lanatus HOM05D004289 ORTHO05D005141 7.4e-13 77.4 81 53.1
Zm00001eb349170 Zea mays HOM05D004289 ORTHO05D005141 7.4e-13 77.4 93 50.5
Lj3g0023226 Lotus japonicus HOM05D004289 ORTHO05D005141 9.7e-13 77.0 94 46.8
Haze_10030 Corylus avellana HOM05D004289 ORTHO05D005141 1.3e-12 76.6 70 61.4
RcHm_v2.0_Chr7g0229261 Rosa chinensis HOM05D004289 ORTHO05D005141 1.3e-12 76.6 94 50.0
unitig_32.g11200 Utricularia gibba HOM05D004289 ORTHO05D005141 1.3e-12 76.6 92 47.8
MSTRG.20324 Avicennia marina HOM05D004289 ORTHO05D005141 1.7e-12 76.3 108 48.1
CsaV3_5G040360 Cucumis sativus L. HOM05D004289 ORTHO05D005141 1.7e-12 76.3 93 47.3
FAN18G0926 Fragaria x ananassa HOM05D004289 ORTHO05D005141 2.2e-12 75.9 92 51.1
Psat7g226600 Pisum sativum HOM05D004289 ORTHO05D005141 2.2e-12 75.9 90 47.8
ATR1136G135 Amborella trichopoda HOM05D004289 ORTHO05D005141 4.8e-12 74.7 86 52.3
arahy.Tifrunner.gnm1.ann1.291MDK Arachis hypogaea HOM05D004289 ORTHO05D005141 4.8e-12 74.7 92 48.9
Cc10_g09380 Coffea canephora HOM05D004289 ORTHO05D005141 6.3e-12 74.3 103 47.6
Gohir.D04G177000 Gossypium hirsutum HOM05D004289 ORTHO05D005141 6.3e-12 74.3 93 50.5
Gorai.012G169900 Gossypium raimondii HOM05D004289 ORTHO05D005141 6.3e-12 74.3 93 50.5
MBI18_g30384_MAGBIO Magnolia biondii HOM05D004289 ORTHO05D005141 6.3e-12 74.3 82 51.2
RcHm_v2.0_Chr3g0495521 Rosa chinensis HOM05D004289 ORTHO05D005141 6.3e-12 74.3 54 64.8
Glyma.16G002000 Glycine max HOM05D004289 ORTHO05D005141 8.2e-12 73.9 103 45.6
Sed0020386 Sechium edule HOM05D004289 ORTHO05D005141 8.2e-12 73.9 97 53.6
RcHm_v2.0_Chr5g0063911 Rosa chinensis HOM05D004289 ORTHO05D005141 1.1e-11 73.6 54 64.8
Sed0006384 Sechium edule HOM05D004289 ORTHO05D005141 1.1e-11 73.6 107 44.9
VMungo0540G1552 Vigna mungo HOM05D004289 ORTHO05D005141 1.4e-11 73.2 79 51.9
Haze_13910 Corylus avellana HOM05D002143 ORTHO05D002260 1.8e-11 72.8 67 59.7
Gohir.A04G133900 Gossypium hirsutum HOM05D004289 ORTHO05D005141 1.8e-11 72.8 92 50.0
HanXRQChr03g0067991 Helianthus annuus HOM05D004289 ORTHO05D005141 1.8e-11 72.8 92 47.8
CiPaw.05G003600 Carya illinoinensis HOM05D004289 ORTHO05D005141 3.1e-11 72.0 70 58.6
FvH4_5g28260 Fragaria vesca HOM05D004289 ORTHO05D005141 7.0e-11 70.9 63 57.1
Cc02_g23340 Coffea canephora HOM05D004289 ORTHO05D005141 1.2e-10 70.1 109 46.8
PGR042G0739 Punica granatum HOM05D004289 ORTHO05D005141 1.2e-10 70.1 93 49.5
Oeu048223.2 Olea europaea HOM05D004289 ORTHO05D005141 1.6e-10 69.7 85 48.2
arahy.Tifrunner.gnm1.ann1.M3EZX1 Arachis hypogaea HOM05D004289 ORTHO05D005141 4.5e-10 68.2 87 48.3
Glyma.12G165600 Glycine max HOM05D004289 ORTHO05D005141 4.5e-10 68.2 105 46.7
FAN04G1595 Fragaria x ananassa HOM05D004289 ORTHO05D005141 5.9e-10 67.8 82 50.0
Lalb_Chr18g0061091 Lupinus albus HOM05D004289 ORTHO05D005141 7.7e-10 67.4 95 46.3
TPR.G2097 Trifolium pratense HOM05D004289 ORTHO05D005141 7.7e-10 67.4 53 64.2
FAN18G1872 Fragaria x ananassa HOM05D004289 ORTHO05D005141 1.0e-09 67.0 81 49.4
CDE08G0453 Ceratophyllum demersum HOM05D004289 ORTHO05D005141 1.3e-09 66.6 70 50.0
SalBow7G1625 Salvia bowleyana HOM05D004289 ORTHO05D005141 2.9e-09 65.5 78 51.3
Lalb_Chr15g0090801 Lupinus albus HOM05D004289 ORTHO05D005141 8.5e-09 63.9 95 43.2
SEGI_28610 Sequoiadendron giganteum HOM05D004061 ORTHO05D004693 8.5e-09 63.9 78 42.3
Actinidia01613 Actinidia chinensis HOM05D000487 ORTHO05D000405 1.5e-08 63.2 75 48.0
arahy.Tifrunner.gnm1.ann1.2Z03QX Arachis hypogaea HOM05D004289 ORTHO05D005141 1.6e-07 59.7 110 40.0
DCAR_001703 Daucus carota HOM05D004289 ORTHO05D005141 1.0e-06 57.0 109 43.1
CARHR163390 Cardamine hirsuta HOM05D004061 ORTHO05D004693 1.8e-06 56.2 76 42.1
Sp5g08850 Schrenkiella parvula HOM05D004061 ORTHO05D004693 2.3e-06 55.8 76 43.4
SMO164G0167 Selaginella moellendorffii HOM05D004061 ORTHO05D004693 2.3e-06 55.8 73 46.6
Sopen01g045750 Solanum pennellii HOM05D004289 ORTHO05D005141 2.3e-06 55.8 94 42.6
PSO339G1720 Papaver somniferum HOM05D004061 ORTHO05D004693 4.0e-06 55.1 57 56.1
PSO384G5009 Papaver somniferum HOM05D004061 ORTHO05D004693 6.7e-06 54.3 57 54.4


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