Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 0.0e+00 1737.2 922 100.0
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 0.0e+00 1399.0 937 83.8
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 0.0e+00 1245.0 925 74.3
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 0.0e+00 1209.9 935 74.2
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 1.1e-277 960.3 962 62.2
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 1.7e-275 953.0 925 63.6
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 3.8e-275 951.8 926 62.7
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 5.5e-274 948.0 927 63.2
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 5.2e-272 941.4 938 62.8
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 5.7e-271 937.9 936 61.6
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 7.4e-271 937.6 937 62.3
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 2.3e-203 713.4 1037 46.4
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.1e-192 677.9 1041 43.7
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 2.4e-99 367.9 1007 32.0
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 8.4e-97 359.4 963 34.1
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 1.4e-96 358.6 972 33.4
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 2.4e-96 357.8 960 34.1
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 5.4e-96 356.7 1108 30.1
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 7.1e-96 356.3 1093 30.7
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 2.1e-92 344.7 854 33.8
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 2.1e-92 344.7 1093 30.6
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 8.1e-92 342.8 1044 31.4
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 1.1e-91 342.4 1028 30.2
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 1.1e-91 342.4 1027 31.3
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 3.8e-89 334.0 1055 30.4
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 1.7e-86 325.1 1058 30.1
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 6.6e-86 323.2 963 31.7
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 7.4e-85 319.7 945 30.9
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 2.4e-83 314.7 859 31.4
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 1.1e-80 305.8 1049 29.5
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 3.2e-80 304.3 944 29.7
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 4.2e-80 303.9 1080 30.2
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 9.3e-80 302.8 1022 30.0
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 1.6e-79 302.0 1125 28.1
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 3.9e-78 297.4 1037 29.1
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 8.7e-78 296.2 1087 28.1
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 4.3e-77 293.9 1037 29.7
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 3.7e-76 290.8 872 30.0
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 1.1e-75 289.3 886 28.9
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 4.0e-75 287.3 924 29.7
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 4.0e-75 287.3 1008 28.8
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 2.0e-74 285.0 995 29.9
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 2.0e-74 285.0 959 30.3
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 2.0e-74 285.0 1033 28.4
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 4.5e-74 283.9 1003 29.3
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 7.6e-74 283.1 537 35.9
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 4.9e-73 280.4 1057 28.4
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 8.4e-73 279.6 1057 28.5
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 3.2e-72 277.7 964 29.6
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 5.5e-72 276.9 1045 28.5
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 1.2e-71 275.8 715 31.2
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.7e-71 274.6 1022 28.6
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 7.9e-71 273.1 945 28.7
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 3.9e-70 270.8 968 28.4
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 6.7e-70 270.0 914 27.7
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.5e-69 268.1 1022 28.7
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 3.3e-69 267.7 1038 27.8
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 3.3e-69 267.7 1031 28.7
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 9.6e-69 266.2 1006 28.0
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 1.6e-68 265.4 699 32.0
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 8.2e-68 263.1 1041 28.4
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 1.4e-67 262.3 536 32.5
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 1.2e-66 259.2 530 32.1
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 1.2e-66 259.2 841 29.0
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 4.5e-66 257.3 829 29.0
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 2.2e-65 255.0 948 27.7
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 8.4e-65 253.1 317 45.4
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 2.5e-64 251.5 768 28.5
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 7.2e-64 250.0 952 27.6
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 1.0e-62 246.1 764 28.4
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 1.1e-61 242.7 547 32.5
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 1.9e-61 241.9 908 27.5
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 2.2e-60 238.4 897 27.1
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 2.8e-60 238.0 361 39.3
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 2.8e-60 238.0 366 39.1
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 8.2e-60 236.5 611 30.1
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.4e-59 235.7 987 27.6
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 3.1e-59 234.6 704 30.0
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 9.0e-59 233.0 702 29.6
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 1.2e-58 232.6 529 31.6
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 2.6e-58 231.5 1034 27.5
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 5.9e-58 230.3 1093 26.5
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 3.8e-57 227.6 623 29.7
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 3.6e-55 221.1 938 26.5
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 7.9e-55 219.9 945 26.7
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 1.0e-54 219.5 944 29.0
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 7.4e-53 213.4 339 38.6
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 9.7e-53 213.0 533 30.6
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 1.1e-51 209.5 966 26.1
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 6.9e-51 206.8 556 29.5
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 1.2e-50 206.1 996 25.4
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 1.0e-46 193.0 339 35.7
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 3.0e-46 191.4 361 34.6
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 1.3e-44 186.0 891 25.8
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 2.8e-44 184.9 1069 24.3
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 4.8e-44 184.1 180 50.0
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 1.6e-42 179.1 321 34.9
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 9.4e-40 169.9 361 32.4
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 2.3e-38 165.2 559 26.1
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 5.2e-38 164.1 287 33.8
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 2.0e-37 162.2 328 33.5
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 1.1e-32 146.4 200 40.0
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 5.5e-32 144.1 177 42.4
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 2.1e-31 142.1 219 37.9
Manes.08G121600 Manihot esculenta HOM05D006048 ORTHO05D007642 5.9e-26 124.0 707 25.7
AagrBONN_evm.TU.Sc2ySwM_344.3982 Anthoceros agrestis HOM05D006048 ORTHO05D007642 2.5e-24 118.6 227 31.7
Mapoly0011s0030 Marchantia polymorpha HOM05D006048 ORTHO05D007642 5.5e-24 117.5 222 31.1
Atru.chr2.429 Acer truncatum HOM05D006048 ORTHO05D007642 6.6e-17 94.0 285 30.2
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 1.9e-16 92.4 191 30.4
CiPaw.07G016800 Carya illinoinensis HOM05D006048 ORTHO05D007642 3.3e-16 91.7 533 24.2
CiPaw.08G165500 Carya illinoinensis HOM05D006048 ORTHO05D007642 1.2e-13 83.2 83 49.4
SMO203G0156 Selaginella moellendorffii HOM05D006048 ORTHO05D007642 1.7e-12 79.3 267 28.1
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 2.7e-10 72.0 258 25.6


User provided reference genes

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