Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G65020 Arabidopsis lyrata HOM05D001276 ORTHO05D001085 9.6e-11 68.9 39 100.0
AL1G65060 Arabidopsis lyrata HOM05D001276 ORTHO05D001085 9.6e-11 68.9 39 100.0
AT1G54630 Arabidopsis thaliana HOM05D001276 ORTHO05D001085 4.7e-10 66.6 39 97.4
CARHR055730 Cardamine hirsuta HOM05D001276 ORTHO05D001085 8.1e-10 65.9 39 92.3
AT1G54580 Arabidopsis thaliana HOM05D001276 ORTHO05D001085 1.4e-09 65.1 39 94.9
Carub.0002s0895 Capsella rubella HOM05D001276 ORTHO05D001085 1.5e-08 61.6 37 89.2
Carub.0002s0904 Capsella rubella HOM05D001276 ORTHO05D001085 1.5e-08 61.6 37 89.2
Thhalv10023754m.g Eutrema salsugineum HOM05D001276 ORTHO05D001085 5.8e-08 59.7 37 89.2
Thhalv10024150m.g Eutrema salsugineum HOM05D001276 ORTHO05D001085 5.8e-08 59.7 37 89.2
BolC1t05713H Brassica oleracea HOM05D001276 ORTHO05D001085 1.7e-07 58.2 36 88.9
Thhalv10021740m.g Eutrema salsugineum HOM05D001276 ORTHO05D001085 1.7e-07 58.2 36 86.1
Thhalv10023810m.g Eutrema salsugineum HOM05D001276 ORTHO05D001085 2.2e-07 57.8 37 86.5
Aa31LG5G15410 Aethionema arabicum HOM05D001276 ORTHO05D001085 2.9e-07 57.4 36 86.1
BcaC05g29984 Brassica carinata HOM05D001276 ORTHO05D001085 2.9e-07 57.4 33 93.9
BcaC05g29986 Brassica carinata HOM05D001276 ORTHO05D001085 2.9e-07 57.4 33 93.9
A03p33960 Brassica napus HOM05D001276 ORTHO05D001085 2.9e-07 57.4 39 84.6
AL3G15390 Arabidopsis lyrata HOM05D001276 ORTHO05D001085 3.8e-07 57.0 36 86.1
BcaB04g21372 Brassica carinata HOM05D001276 ORTHO05D001085 3.8e-07 57.0 36 86.1
BNapus_Darmor_BZH_scaffold_114p00290 Brassica napus HOM05D001276 ORTHO05D001085 3.8e-07 57.0 36 86.1
AT3G05020 Arabidopsis thaliana HOM05D001276 ORTHO05D001085 4.9e-07 56.6 36 86.1
CARHR079340 Cardamine hirsuta HOM05D001276 ORTHO05D001085 4.9e-07 56.6 36 86.1
SpUn0001_0010 Schrenkiella parvula HOM05D001276 ORTHO05D001085 4.9e-07 56.6 37 86.5
THA.LOC104802818 Tarenaya hassleriana HOM05D001276 ORTHO05D001085 4.9e-07 56.6 36 86.1
THA.LOC104818660 Tarenaya hassleriana HOM05D001276 ORTHO05D001085 4.9e-07 56.6 36 86.1
Sp3g03850 Schrenkiella parvula HOM05D001276 ORTHO05D001085 6.4e-07 56.2 36 83.3
Aa31LG2G12150 Aethionema arabicum HOM05D001276 ORTHO05D001085 1.1e-06 55.5 40 82.5
BcaC01g04337 Brassica carinata HOM05D001276 ORTHO05D001085 1.1e-06 55.5 36 86.1
C03p41340 Brassica napus HOM05D001276 ORTHO05D001085 1.1e-06 55.5 36 86.1
BolC3t16417H Brassica oleracea HOM05D001276 ORTHO05D001085 1.1e-06 55.5 36 86.1
Carub.0003s0426 Capsella rubella HOM05D001276 ORTHO05D001085 1.1e-06 55.5 36 83.3
CARHR185800 Cardamine hirsuta HOM05D001276 ORTHO05D001085 1.9e-06 54.7 36 80.6
THA.LOC104823741 Tarenaya hassleriana HOM05D001276 ORTHO05D001085 1.9e-06 54.7 36 80.6
Aa31LG11G8940 Aethionema arabicum HOM05D001276 ORTHO05D001085 2.4e-06 54.3 37 81.1
AL6G40000 Arabidopsis lyrata HOM05D001276 ORTHO05D001085 3.2e-06 53.9 36 80.6
AT5G27200 Arabidopsis thaliana HOM05D001276 ORTHO05D001085 3.2e-06 53.9 36 80.6
A05p42560 Brassica napus HOM05D001276 ORTHO05D001085 3.2e-06 53.9 36 83.3
Carub.0006s2531 Capsella rubella HOM05D001276 ORTHO05D001085 3.2e-06 53.9 36 80.6
BraA05t22996Z Brassica rapa HOM05D001276 ORTHO05D001085 4.2e-06 53.5 33 87.9
Sp2g20440 Schrenkiella parvula HOM05D001276 ORTHO05D001085 4.2e-06 53.5 36 80.6
THA.LOC104808037 Tarenaya hassleriana HOM05D001276 ORTHO05D001085 9.3e-06 52.4 39 74.4


User provided reference genes

Program Settings