Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 5.4e-37 157.1 79 100.0
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 1.5e-34 149.1 79 94.9
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 4.7e-33 144.1 76 92.1
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 8.9e-32 139.8 76 90.8
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 8.9e-32 139.8 76 90.8
AL7G41500 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 2.0e-31 138.7 76 88.2
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 2.0e-31 138.7 75 89.3
AT1G52825 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 2.6e-31 138.3 73 93.2
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 3.4e-31 137.9 75 86.7
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 5.8e-31 137.1 75 88.0
Thhalv10011910m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 5.8e-31 137.1 75 90.7
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 1.3e-30 136.0 75 89.3
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 1.3e-30 136.0 75 89.3
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 1.3e-30 136.0 75 89.3
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 3.8e-30 134.4 75 88.0
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 3.8e-30 134.4 75 88.0
CANSAT80G2460 Cannabis sativa HOM05D006636 ORTHO05D008266 1.1e-29 132.9 75 85.3
THA.LOC104808586 Tarenaya hassleriana HOM05D006636 ORTHO05D008266 2.4e-29 131.7 75 85.3
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 3.2e-29 131.3 74 82.4
Duzib151G1121 Durio zibethinus HOM05D006636 ORTHO05D008266 5.4e-29 130.6 75 80.0
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 5.4e-29 130.6 74 82.4
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 5.4e-29 130.6 74 82.4
Carub.0001s4194 Capsella rubella HOM05D006636 ORTHO05D008266 9.2e-29 129.8 70 92.9
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 2.7e-28 128.3 73 79.5
MD16G1204700 Malus domestica HOM05D006636 ORTHO05D008266 2.7e-28 128.3 73 80.8
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 3.5e-28 127.9 75 80.0
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 6.0e-28 127.1 74 79.7
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 6.0e-28 127.1 74 79.7
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 6.0e-28 127.1 74 79.7
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 6.0e-28 127.1 76 80.3
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 6.0e-28 127.1 75 81.3
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 7.8e-28 126.7 74 78.4
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 7.8e-28 126.7 75 80.0
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 1.0e-27 126.3 74 81.1
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 1.3e-27 125.9 76 78.9
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 1.3e-27 125.9 74 82.4
Aqoxy5G00371 Aquilegia oxysepala HOM05D006636 ORTHO05D008266 1.7e-27 125.6 76 78.9
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.7e-27 125.6 74 77.0
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 1.7e-27 125.6 74 77.0
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 2.3e-27 125.2 74 78.4
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 2.3e-27 125.2 75 80.0
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 3.0e-27 124.8 75 81.3
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 3.9e-27 124.4 75 80.0
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 5.1e-27 124.0 75 78.7
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 8.7e-27 123.2 75 77.3
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 1.9e-26 122.1 75 80.0
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 1.9e-26 122.1 75 80.0
COL.COLO4_15761 Corchorus olitorius HOM05D006636 ORTHO05D008266 2.5e-26 121.7 74 77.0
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 2.5e-26 121.7 74 75.7
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 3.3e-26 121.3 75 77.3
Phvul.006G006400 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 3.3e-26 121.3 74 77.0
Phvul.010G060600 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 3.3e-26 121.3 75 74.7
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 7.3e-26 120.2 74 79.7
Glyma.02G001300 Glycine max HOM05D006636 ORTHO05D008266 7.3e-26 120.2 74 75.7
TWI53G1752 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 7.3e-26 120.2 75 76.0
TWI53G1902 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 7.3e-26 120.2 75 76.0
PGR142G1808 Punica granatum HOM05D006636 ORTHO05D008266 9.6e-26 119.8 74 75.7
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.2e-25 119.4 74 73.0
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 1.6e-25 119.0 75 76.0
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 2.8e-25 118.2 74 71.6
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 3.6e-25 117.9 75 74.7
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 4.7e-25 117.5 78 70.5
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 8.1e-25 116.7 74 74.3
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 1.1e-24 116.3 78 67.9
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 1.1e-24 116.3 78 69.2
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 1.4e-24 115.9 78 69.2
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 1.4e-24 115.9 74 73.0
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 2.4e-24 115.2 76 68.4
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 4.0e-24 114.4 77 67.5
PSO210G2897 Papaver somniferum HOM05D006636 ORTHO05D008266 5.2e-24 114.0 76 68.4
Potri.008G160101 Populus trichocarpa HOM05D006636 ORTHO05D008266 5.2e-24 114.0 75 70.7
Peaxi162Scf00788g00311 Petunia axillaris HOM05D006636 ORTHO05D008266 6.9e-24 113.6 74 74.3
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 6.9e-24 113.6 78 65.4
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 1.5e-23 112.5 74 68.9
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 2.0e-23 112.1 71 73.2
Oeu029765.1 Olea europaea HOM05D006636 ORTHO05D008266 3.4e-23 111.3 74 71.6
Potri.010G079100 Populus trichocarpa HOM05D006636 ORTHO05D008266 3.4e-23 111.3 74 68.9
Nitab4.5_0001856g0080 Nicotiana tabacum HOM05D006636 ORTHO05D008266 5.8e-23 110.5 73 72.6
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 7.6e-23 110.2 75 68.0
Nitab4.5_0001787g0030 Nicotiana tabacum HOM05D006636 ORTHO05D008266 9.9e-23 109.8 73 72.6
TWI73G0386 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 9.9e-23 109.8 75 69.3
PSO832G4373 Papaver somniferum HOM05D006636 ORTHO05D008266 1.3e-22 109.4 75 69.3
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 1.7e-22 109.0 77 68.8
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 1.7e-22 109.0 74 71.6
Lj3g0021432 Lotus japonicus HOM05D006636 ORTHO05D008266 2.2e-22 108.6 75 72.0
Psat6g136920 Pisum sativum HOM05D006636 ORTHO05D008266 2.2e-22 108.6 77 70.1
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 2.9e-22 108.2 74 70.3
TPR.G32796 Trifolium pratense HOM05D006636 ORTHO05D008266 4.9e-22 107.5 77 67.5
Dinv14071 Davidia involucrata HOM05D006636 ORTHO05D008266 6.4e-22 107.1 66 78.8
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 6.4e-22 107.1 73 71.2
Oeu032618.1 Olea europaea HOM05D006636 ORTHO05D008266 8.4e-22 106.7 73 69.9
GSVIVG01018087001 Vitis vinifera HOM05D006636 ORTHO05D008266 1.1e-21 106.3 74 68.9
CAN.G749.28 Capsicum annuum HOM05D006636 ORTHO05D008266 1.9e-21 105.5 73 68.5
Solyc09g083070.3 Solanum lycopersicum HOM05D006636 ORTHO05D008266 1.9e-21 105.5 73 69.9
Ca_12203_v3 Cicer arietinum L. HOM05D006636 ORTHO05D008266 2.4e-21 105.1 77 66.2
Medtr1g040905 Medicago truncatula HOM05D006636 ORTHO05D008266 5.4e-21 104.0 75 68.0
Sopen09g031950 Solanum pennellii HOM05D006636 ORTHO05D008266 5.4e-21 104.0 73 68.5
Haze_11264 Corylus avellana HOM05D006636 ORTHO05D008266 7.1e-21 103.6 104 53.8
ATR0665G452 Amborella trichopoda HOM05D006636 ORTHO05D008266 1.2e-20 102.8 67 67.2
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 2.1e-20 102.1 75 66.7
Zm00001eb116910 Zea mays HOM05D006636 ORTHO05D008266 2.1e-20 102.1 73 68.5
Psat4g152400 Pisum sativum HOM05D006636 ORTHO05D008266 2.7e-20 101.7 77 66.2
Os07g0181800 Oryza sativa ssp. japonica HOM05D006636 ORTHO05D008266 3.5e-20 101.3 73 65.8
CDE07G1452 Ceratophyllum demersum HOM05D006636 ORTHO05D008266 1.1e-18 96.3 75 58.7
Sabra10G0063800 Salix brachista HOM05D006636 ORTHO05D008266 3.3e-18 94.7 116 45.7
Pp3c4_21990 Physcomitrium patens HOM05D006636 ORTHO05D008266 4.3e-18 94.4 68 60.3
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 3.6e-17 91.3 71 60.6
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 6.2e-17 90.5 84 58.3
Mapoly0075s0084 Marchantia polymorpha HOM05D006636 ORTHO05D008266 9.9e-15 83.2 68 52.9
HanXRQChr13g0424641 Helianthus annuus HOM05D006636 ORTHO05D008266 1.8e-11 72.4 51 66.7
Psat0s152g0080 Pisum sativum HOM05D006636 ORTHO05D008266 5.1e-11 70.9 57 61.4
AagrBONN_evm.TU.Sc2ySwM_117.3049 Anthoceros agrestis HOM05D006636 ORTHO05D008266 1.1e-10 69.7 62 50.0
PGSC0003DMG400006103 Solanum tuberosum HOM05D006636 ORTHO05D008266 1.3e-09 66.2 46 65.2
unitig_26.g9474 Utricularia gibba HOM05D006636 ORTHO05D008266 2.1e-09 65.5 43 67.4
MCO07G270 Micromonas commoda HOM05D006636 ORTHO05D008266 3.7e-09 64.7 63 46.0
Actinidia40100 Actinidia chinensis HOM05D006636 ORTHO05D008266 6.2e-09 63.9 67 50.7
FvH4_4g02000 Fragaria vesca HOM05D006636 ORTHO05D008266 8.1e-09 63.5 34 85.3
SalBow4G0852 Salvia bowleyana HOM05D006636 ORTHO05D008266 1.8e-08 62.4 56 53.6
SHI00567 Sapria himalayana HOM05D006636 ORTHO05D008266 3.1e-08 61.6 43 67.4
GSVIVG01002945001 Vitis vinifera HOM05D006636 ORTHO05D008266 2.0e-07 58.9 41 68.3
Rhsim02G0032300 Rhododendron simsii HOM05D006636 ORTHO05D008266 4.5e-07 57.8 33 75.8
MBI04_g19760_MAGBIO Magnolia biondii HOM05D006636 ORTHO05D008266 6.4e-06 53.9 35 65.7


User provided reference genes

Program Settings