Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G58320 Arabidopsis lyrata HOM05D012777 ORTHO05D009905 1.5e-79 299.7 174 100.0
AT1G50650 Arabidopsis thaliana HOM05D012777 ORTHO05D009905 1.1e-61 240.4 175 84.0
Carub.0001s3969 Capsella rubella HOM05D012777 ORTHO05D009905 3.1e-61 238.8 175 86.3
CARHR040700 Cardamine hirsuta HOM05D012777 ORTHO05D009905 1.8e-53 213.0 175 80.6
Thhalv10012178m.g Eutrema salsugineum HOM05D012777 ORTHO05D009905 5.5e-50 201.4 179 73.2
C06p05910 Brassica napus HOM05D012777 ORTHO05D009905 2.2e-43 179.5 175 70.3
A06p02970 Brassica napus HOM05D012777 ORTHO05D009905 3.8e-43 178.7 175 69.7
BraA06t23503Z Brassica rapa HOM05D012777 ORTHO05D009905 1.9e-42 176.4 173 69.9
BolC6t35704H Brassica oleracea HOM05D012777 ORTHO05D009905 4.2e-42 175.3 175 69.1
BcaC08g43242 Brassica carinata HOM05D012777 ORTHO05D009905 1.6e-41 173.3 175 69.7
Sp1g37480 Schrenkiella parvula HOM05D012777 ORTHO05D009905 9.1e-37 157.5 127 85.0
THA.LOC104798770 Tarenaya hassleriana HOM05D012777 ORTHO05D009905 6.1e-25 118.2 174 56.9
Aa31LG10G3680 Aethionema arabicum HOM05D012777 ORTHO05D009905 1.7e-11 73.6 100 70.0
TWI39G0594 Tripterygium wilfordii HOM05D008051 ORTHO05D009905 5.0e-11 72.0 110 40.0
Potri.001G355700 Populus trichocarpa HOM05D008051 ORTHO05D009905 7.3e-10 68.2 102 41.2
PGR083G0962 Punica granatum HOM05D008051 ORTHO05D009905 2.8e-09 66.2 80 38.8
Prupe.4G221300 Prunus persica HOM05D008051 ORTHO05D009905 4.7e-09 65.5 96 38.5
COL.COLO4_09713 Corchorus olitorius HOM05D008051 ORTHO05D009905 8.0e-09 64.7 67 49.3
Eucgr.F00712 Eucalyptus grandis HOM05D008051 ORTHO05D009905 1.8e-08 63.5 77 42.9
Ciclev10010548m.g Citrus clementina HOM05D008051 ORTHO05D009905 2.3e-08 63.2 97 38.1
Atru.chr2.3503 Acer truncatum HOM05D007124 ORTHO05D008980 8.9e-08 61.2 123 56.1
Cpa.g.sc12.286 Carica papaya HOM05D008051 ORTHO05D009905 8.9e-08 61.2 97 41.2
Gohir.A01G083500 Gossypium hirsutum HOM05D008051 ORTHO05D009905 8.9e-08 61.2 75 42.7
Sabra11G0071300 Salix brachista HOM05D008051 ORTHO05D009905 8.9e-08 61.2 150 50.7
RcHm_v2.0_Chr5g0041151 Rosa chinensis HOM05D008051 ORTHO05D009905 2.0e-07 60.1 50 54.0
Gohir.D01G070000 Gossypium hirsutum HOM05D008051 ORTHO05D009905 3.4e-07 59.3 79 38.0
Gorai.002G092500 Gossypium raimondii HOM05D008051 ORTHO05D009905 3.4e-07 59.3 79 38.0
Thecc.07G029800 Theobroma cacao HOM05D008051 ORTHO05D009905 4.4e-07 58.9 73 39.7
Haze_21340 Corylus avellana HOM05D008051 ORTHO05D009905 5.8e-07 58.5 85 40.0
Sabra11G0072200 Salix brachista HOM05D008051 ORTHO05D009905 7.5e-07 58.2 76 44.7
Haze_09724 Corylus avellana HOM05D008051 ORTHO05D009905 9.8e-07 57.8 84 40.5
Solyc03g116450.1 Solanum lycopersicum HOM05D008051 ORTHO05D009905 9.8e-07 57.8 141 49.6
Haze_21342 Corylus avellana HOM05D008051 ORTHO05D009905 1.7e-06 57.0 84 39.3
Nn7g36860 Nelumbo nucifera HOM05D008051 ORTHO05D009905 1.7e-06 57.0 39 53.8
EL10Ac4g07747 Beta vulgaris HOM05D008051 ORTHO05D009905 2.2e-06 56.6 74 37.8
CANSAT11G0109 Cannabis sativa HOM05D008051 ORTHO05D009905 2.2e-06 56.6 110 59.1
PGSC0003DMG401000629 Solanum tuberosum HOM05D008051 ORTHO05D009905 4.9e-06 55.5 73 39.7
SGA_v2.0_scaffold196G40892 Striga asiatica HOM05D008051 ORTHO05D009905 6.4e-06 55.1 69 40.6
vmacro21377 Vaccinium macrocarpon HOM05D008051 ORTHO05D009905 6.4e-06 55.1 115 56.5
CSS0002609 Camellia sinensis var. sinensis HOM05D008051 ORTHO05D009905 8.3e-06 54.7 71 39.4


User provided reference genes

Program Settings