Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G57570 Arabidopsis lyrata HOM05D001568 ORTHO05D008804 2.8e-163 578.6 296 100.0
AT1G50000 Arabidopsis thaliana HOM05D001568 ORTHO05D008804 4.1e-154 548.1 296 94.3
Carub.0151s0002 Capsella rubella HOM05D001568 ORTHO05D008804 6.5e-152 540.8 296 93.2
Sp1g36840 Schrenkiella parvula HOM05D001568 ORTHO05D008804 3.0e-149 531.9 296 90.5
SpUn0137_0040 Schrenkiella parvula HOM05D001568 ORTHO05D008804 3.0e-149 531.9 296 90.5
BcaC08g43178 Brassica carinata HOM05D001568 ORTHO05D008804 1.4e-146 523.1 304 88.8
BcaB07g33452 Brassica carinata HOM05D001568 ORTHO05D008804 7.7e-145 517.3 297 89.2
BolC6t35607H Brassica oleracea HOM05D001568 ORTHO05D008804 1.3e-144 516.5 305 88.5
C06p04780 Brassica napus HOM05D001568 ORTHO05D008804 2.5e-143 512.3 305 87.5
A06p03430 Brassica napus HOM05D001568 ORTHO05D008804 1.6e-142 509.6 307 87.6
BraA06t23551Z Brassica rapa HOM05D001568 ORTHO05D008804 1.5e-140 503.1 305 86.9
THA.LOC104826495 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 2.4e-122 442.6 293 78.2
THA.LOC104826496 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 7.0e-122 441.0 293 78.2
Thhalv10011739m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 1.3e-120 436.8 233 93.6
CARHR040100 Cardamine hirsuta HOM05D001568 ORTHO05D008804 8.6e-112 407.5 219 94.5
Atru.chr5.2305 Acer truncatum HOM05D001568 ORTHO05D008804 1.3e-107 393.7 289 69.9
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 8.3e-107 391.0 288 70.1
Manes.07G057400 Manihot esculenta HOM05D001568 ORTHO05D008804 1.9e-106 389.8 285 68.4
Thecc.02G119500 Theobroma cacao HOM05D001568 ORTHO05D008804 7.1e-106 387.9 286 68.5
CSS0011887 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D008804 1.2e-105 387.1 291 67.7
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 1.6e-105 386.7 286 68.2
TAR628G1281 Trochodendron aralioides HOM05D001568 ORTHO05D008804 1.6e-105 386.7 277 69.7
TWI14G1141 Tripterygium wilfordii HOM05D001568 ORTHO05D008804 2.7e-105 386.0 293 67.6
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 4.6e-105 385.2 292 67.8
Gorai.008G019500 Gossypium raimondii HOM05D001568 ORTHO05D008804 6.0e-105 384.8 274 69.3
RcHm_v2.0_Chr6g0248601 Rosa chinensis HOM05D001568 ORTHO05D008804 2.3e-104 382.9 286 67.1
FvH4_2g03440 Fragaria vesca HOM05D001568 ORTHO05D008804 3.0e-104 382.5 294 66.0
Rhsim05G0092700 Rhododendron simsii HOM05D001568 ORTHO05D008804 3.9e-104 382.1 267 70.8
CiPaw.05G020500 Carya illinoinensis HOM05D001568 ORTHO05D008804 1.1e-103 380.6 277 69.0
Prupe.8G149200 Prunus persica HOM05D001568 ORTHO05D008804 1.1e-103 380.6 286 66.4
Gohir.A12G018701 Gossypium hirsutum HOM05D001568 ORTHO05D008804 5.6e-103 378.3 274 68.2
CANSAT25G3386 Cannabis sativa HOM05D001568 ORTHO05D008804 2.1e-102 376.3 292 65.8
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 2.8e-102 375.9 251 73.3
Actinidia04394 Actinidia chinensis HOM05D001568 ORTHO05D008804 4.7e-102 375.2 268 70.1
Aa31LG10G4130 Aethionema arabicum HOM05D001568 ORTHO05D008804 1.4e-101 373.6 208 90.9
Lj1g0020001 Lotus japonicus HOM05D001568 ORTHO05D008804 4.0e-101 372.1 273 67.0
TPR.G21139 Trifolium pratense HOM05D001568 ORTHO05D008804 5.2e-101 371.7 266 69.2
Ca_11027_v3 Cicer arietinum L. HOM05D001568 ORTHO05D008804 8.9e-101 370.9 278 66.9
Medtr1g106055 Medicago truncatula HOM05D001568 ORTHO05D008804 2.6e-100 369.4 293 64.8
Solyc01g106880.3 Solanum lycopersicum HOM05D001568 ORTHO05D008804 3.4e-100 369.0 289 64.4
Nitab4.5_0001099g0070 Nicotiana tabacum HOM05D001568 ORTHO05D008804 4.4e-100 368.6 255 69.0
Sopen01g049160 Solanum pennellii HOM05D001568 ORTHO05D008804 4.4e-100 368.6 276 65.9
Haze_10309 Corylus avellana HOM05D001568 ORTHO05D008804 5.8e-100 368.2 293 64.5
Glyma.20G135600 Glycine max HOM05D001568 ORTHO05D008804 9.9e-100 367.5 274 69.0
EL10Ac9g22185 Beta vulgaris HOM05D001568 ORTHO05D008804 1.7e-99 366.7 273 65.9
Aqoxy1G00265 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 3.8e-99 365.5 287 66.9
Potri.001G290100 Populus trichocarpa HOM05D001568 ORTHO05D008804 8.4e-99 364.4 273 66.7
PSO017G1092 Papaver somniferum HOM05D001568 ORTHO05D008804 1.1e-98 364.0 287 64.5
Nitab4.5_0010145g0020 Nicotiana tabacum HOM05D001568 ORTHO05D008804 4.1e-98 362.1 291 63.2
PSO170G6576 Papaver somniferum HOM05D001568 ORTHO05D008804 4.1e-98 362.1 287 63.4
ECA240G3857 Erigeron canadensis HOM05D001568 ORTHO05D008804 7.1e-98 361.3 250 70.8
Migut.B00460 Erythranthe guttata HOM05D001568 ORTHO05D008804 9.2e-98 360.9 254 69.7
HanXRQChr03g0072921 Helianthus annuus HOM05D001568 ORTHO05D008804 1.2e-97 360.5 251 70.5
VMungo0720G2114 Vigna mungo HOM05D001568 ORTHO05D008804 2.1e-97 359.8 275 67.3
Nn5g30645 Nelumbo nucifera HOM05D001568 ORTHO05D008804 1.3e-96 357.1 285 64.2
Lalb_Chr06g0165001 Lupinus albus HOM05D001568 ORTHO05D008804 2.3e-96 356.3 279 65.6
CAN.G606.69 Capsicum annuum HOM05D001568 ORTHO05D008804 3.9e-96 355.5 280 63.2
COL.COLO4_32489 Corchorus olitorius HOM05D001568 ORTHO05D008804 8.6e-96 354.4 286 63.3
Cc00_g17990 Coffea canephora HOM05D001568 ORTHO05D008804 1.5e-95 353.6 276 64.1
FAN15G2988 Fragaria x ananassa HOM05D001568 ORTHO05D008804 2.5e-95 352.8 230 73.9
QL11p029473 Quercus lobata HOM05D001568 ORTHO05D008804 2.5e-95 352.8 320 57.5
CsaV3_7G007700 Cucumis sativus L. HOM05D001568 ORTHO05D008804 3.3e-95 352.4 275 65.5
MELO3C018530.2 Cucumis melo HOM05D001568 ORTHO05D008804 4.3e-95 352.1 279 64.9
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 4.3e-95 352.1 303 61.7
MD10G1109100 Malus domestica HOM05D001568 ORTHO05D008804 3.6e-94 349.0 230 71.3
Cfa004705 Carpinus fangiana HOM05D001568 ORTHO05D008804 5.2e-93 345.1 230 72.2
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea HOM05D001568 ORTHO05D008804 1.2e-92 344.0 231 72.3
CDE04G1257 Ceratophyllum demersum HOM05D001568 ORTHO05D008804 2.6e-92 342.8 253 66.0
Cfa004706 Carpinus fangiana HOM05D001568 ORTHO05D008804 3.4e-92 342.4 289 62.3
ATR0739G203 Amborella trichopoda HOM05D001568 ORTHO05D008804 4.4e-92 342.0 247 66.4
Sc14g0002500 Simmondsia chinensis HOM05D001568 ORTHO05D008804 4.4e-92 342.0 261 66.3
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea HOM05D001568 ORTHO05D008804 5.8e-92 341.7 231 71.9
Lsat_1_v5_gn_9_113380 Lactuca sativa HOM05D001568 ORTHO05D008804 2.9e-91 339.3 272 65.1
unitig_744.g24207 Utricularia gibba HOM05D001568 ORTHO05D008804 2.9e-91 339.3 271 64.2
MBI16_g16470_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D008804 8.4e-91 337.8 228 71.9
DCAR_001738 Daucus carota HOM05D001568 ORTHO05D008804 7.1e-90 334.7 268 60.8
Gohir.D12G019200 Gossypium hirsutum HOM05D001568 ORTHO05D008804 1.2e-89 334.0 274 63.1
SalBow6G4520 Salvia bowleyana HOM05D001568 ORTHO05D008804 1.3e-88 330.5 304 56.9
Lj9A337T44 Lonicera japonica HOM05D001568 ORTHO05D008804 2.3e-88 329.7 229 68.1
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 1.1e-87 327.4 263 63.5
ClCG02G007120 Citrullus lanatus HOM05D001568 ORTHO05D008804 5.6e-87 325.1 284 61.6
Os03g0729700 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D008804 1.4e-85 320.5 252 63.9
Peaxi162Scf00016g03020 Petunia axillaris HOM05D001568 ORTHO05D008804 3.1e-85 319.3 255 62.0
HPP92_026588 Vanilla planifolia HOM05D001568 ORTHO05D008804 1.5e-84 317.0 267 59.2
AUR62027019 Chenopodium quinoa HOM05D001568 ORTHO05D008804 8.4e-83 311.2 217 70.5
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 6.0e-81 305.1 203 72.9
Phvul.007G046900 Phaseolus vulgaris HOM05D001568 ORTHO05D008804 1.6e-78 297.0 228 66.2
AUR62030859 Chenopodium quinoa HOM05D001568 ORTHO05D008804 6.2e-78 295.0 205 70.2
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 5.8e-76 288.5 263 59.7
THA.LOC104809178 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 3.8e-75 285.8 166 84.9
PGR142G1084 Punica granatum HOM05D001568 ORTHO05D008804 4.6e-73 278.9 206 67.5
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis HOM05D001568 ORTHO05D008804 7.9e-73 278.1 245 56.7
Pp3c3_17050 Physcomitrium patens HOM05D001568 ORTHO05D008804 1.4e-66 257.3 248 50.8
Ah.01g007040 Amaranthus hybridus HOM05D001568 ORTHO05D008804 3.5e-65 252.7 183 65.6
Mapoly0081s0053 Marchantia polymorpha HOM05D001568 ORTHO05D008804 1.0e-64 251.1 246 50.4
Psat6g214440 Pisum sativum HOM05D001568 ORTHO05D008804 3.0e-64 249.6 200 61.5
Sed0001597 Sechium edule HOM05D001568 ORTHO05D008804 3.3e-63 246.1 291 49.8
Sabra16G0181700 Salix brachista HOM05D001568 ORTHO05D008804 9.6e-63 244.6 211 60.2
SMO358G0428 Selaginella moellendorffii HOM05D001568 ORTHO05D008804 3.7e-62 242.7 247 50.6
FAN24G1144 Fragaria x ananassa HOM05D001568 ORTHO05D008804 7.6e-60 235.0 219 58.4
CBR_g48696 Chara braunii HOM05D001568 ORTHO05D008804 1.3e-59 234.2 260 47.3
Manes.10G086502 Manihot esculenta HOM05D001568 ORTHO05D008804 2.6e-47 193.4 276 40.9
Aqoxy335s004 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 1.4e-45 187.6 134 70.1
TAR376G0809 Trochodendron aralioides HOM05D001568 ORTHO05D008804 6.9e-45 185.3 285 43.5
Thhalv10012254m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 1.6e-41 174.1 102 88.2
MCO02G312 Micromonas commoda HOM05D001568 ORTHO05D008804 7.2e-34 148.7 172 47.1
FAN24G0164 Fragaria x ananassa HOM05D001568 ORTHO05D008804 1.2e-33 147.9 105 65.7
MSTRG.20236 Avicennia marina HOM05D001568 ORTHO05D008804 4.2e-26 122.9 101 57.4
PRCOL_00000434 Prasinoderma coloniale HOM05D001568 ORTHO05D008804 2.3e-24 117.1 299 31.8
Cre03.g175800 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D008804 2.2e-22 110.5 332 28.3
Rhsim05G0092200 Rhododendron simsii HOM05D001568 ORTHO05D004404 7.5e-15 85.5 102 45.1
RhsimUnG0183700 Rhododendron simsii HOM05D002338 ORTHO05D006706 7.5e-15 85.5 102 45.1
C05p34140 Brassica napus HOM05D001568 ORTHO05D019891 5.9e-12 75.9 51 72.5
Ah.01g007020 Amaranthus hybridus HOM05D001568 ORTHO05D008804 7.8e-12 75.5 48 75.0
BcaC05g27454 Brassica carinata HOM05D001568 ORTHO05D019891 1.0e-11 75.1 51 70.6
BcaC05g27456 Brassica carinata HOM05D001568 ORTHO05D019891 1.0e-11 75.1 51 70.6
BolC5t32148H Brassica oleracea HOM05D058656 ORTHO05D019891 1.0e-11 75.1 51 70.6
RcHm_v2.0_Chr6g0248571 Rosa chinensis HOM05D001568 ORTHO05D008804 3.3e-10 70.1 82 50.0
Actinidia27998 Actinidia chinensis HOM05D001568 ORTHO05D008804 1.2e-07 61.6 52 59.6


User provided reference genes

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