Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 3.0e-61 238.4 130 100.0
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 3.7e-59 231.5 130 97.7
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 2.8e-54 215.3 130 88.5
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 2.8e-54 215.3 130 88.5
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 3.0e-53 211.8 130 86.2
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 2.7e-41 172.2 131 75.6
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 3.5e-41 171.8 131 75.6
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 6.0e-41 171.0 133 75.9
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 2.3e-40 169.1 131 74.8
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 2.3e-40 169.1 131 74.8
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 3.1e-37 158.7 131 72.5
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 6.8e-37 157.5 141 66.0
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 4.4e-36 154.8 133 67.7
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 1.1e-34 150.2 132 67.4
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 1.4e-34 149.8 136 60.3
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 1.4e-34 149.8 133 60.2
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 4.1e-34 148.3 140 63.6
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 5.4e-34 147.9 160 60.6
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 1.2e-33 146.7 133 63.9
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 3.5e-33 145.2 133 64.7
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 1.0e-32 143.7 130 60.8
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 3.9e-32 141.7 148 55.4
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 8.6e-32 140.6 136 63.2
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 2.5e-31 139.0 133 60.9
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 5.6e-31 137.9 133 60.9
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 1.6e-30 136.3 147 55.1
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 1.6e-30 136.3 147 54.4
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 2.1e-30 136.0 135 60.7
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 2.8e-30 135.6 146 54.1
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 4.7e-30 134.8 133 59.4
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 2.3e-29 132.5 133 57.1
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 4.0e-29 131.7 133 56.4
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 4.0e-29 131.7 173 46.2
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 5.2e-29 131.3 133 55.6
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 8.9e-29 130.6 134 58.2
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 8.9e-29 130.6 134 58.2
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 1.2e-28 130.2 136 58.1
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 2.0e-28 129.4 140 55.0
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 2.6e-28 129.0 125 58.4
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 1.7e-27 126.3 93 77.4
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 1.7e-27 126.3 132 61.4
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 1.7e-27 126.3 145 53.8
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 3.7e-27 125.2 127 52.8
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 3.7e-27 125.2 138 58.0
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 8.3e-27 124.0 127 52.0
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 1.4e-26 123.2 125 56.8
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 5.4e-26 121.3 129 57.4
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 1.2e-25 120.2 128 55.5
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 2.1e-25 119.4 121 57.0
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 2.1e-25 119.4 124 57.3
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 2.1e-25 119.4 117 59.8
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 2.7e-25 119.0 139 55.4
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 6.0e-25 117.9 83 74.7
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 1.7e-24 116.3 122 57.4
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.9e-24 115.2 138 48.6
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 6.6e-24 114.4 136 51.5
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 6.6e-24 114.4 130 55.4
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 3.3e-23 112.1 131 53.4
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 3.3e-23 112.1 88 67.0
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 4.3e-23 111.7 121 55.4
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 1.1e-21 107.1 124 51.6
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 1.8e-21 106.3 125 49.6
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 5.2e-21 104.8 123 52.8
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 6.8e-21 104.4 121 57.0
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 1.2e-20 103.6 92 60.9
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 1.2e-20 103.6 99 58.6
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 5.8e-20 101.3 92 58.7
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 7.6e-20 100.9 133 46.6
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 9.9e-20 100.5 122 51.6
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.3e-19 100.1 130 48.5
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.3e-19 100.1 130 48.5
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 1.7e-19 99.8 86 61.6
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 2.2e-19 99.4 119 51.3
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 4.9e-19 98.2 122 50.8
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 8.4e-19 97.4 132 48.5
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 8.4e-19 97.4 112 50.9
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 1.1e-18 97.1 82 65.9
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 1.4e-18 96.7 124 51.6
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 1.9e-18 96.3 131 49.6
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 1.9e-18 96.3 112 50.0
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 3.2e-18 95.5 86 60.5
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 4.2e-18 95.1 86 59.3
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 7.1e-18 94.4 66 69.7
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 9.2e-18 94.0 130 50.0
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 1.6e-17 93.2 99 54.5
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 2.1e-17 92.8 98 56.1
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 2.7e-17 92.4 73 67.1
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 4.6e-17 91.7 97 54.6
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 6.0e-17 91.3 61 75.4
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 2.3e-16 89.4 64 75.0
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 2.3e-16 89.4 80 60.0
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 7.3e-15 84.3 66 65.2
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 1.6e-14 83.2 59 72.9
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 1.1e-13 80.5 87 63.2
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 4.0e-13 78.6 66 60.6
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 2.2e-11 72.8 83 55.4
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 7.1e-10 67.8 68 50.0
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 2.1e-09 66.2 68 50.0
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 4.6e-09 65.1 46 67.4


User provided reference genes

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