Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G56480 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 4.7e-155 551.2 291 100.0
A06p20980 Brassica napus HOM05D005589 ORTHO05D006948 3.9e-133 478.4 316 84.2
C03p70540 Brassica napus HOM05D005589 ORTHO05D006948 1.1e-132 476.9 316 83.5
Sp5g15410 Schrenkiella parvula HOM05D005589 ORTHO05D006948 1.1e-132 476.9 316 83.2
BolC3t19334H Brassica oleracea HOM05D005589 ORTHO05D006948 3.7e-131 471.9 318 83.0
Thhalv10002404m.g Eutrema salsugineum HOM05D005589 ORTHO05D006948 2.4e-130 469.2 316 81.6
Thhalv10002414m.g Eutrema salsugineum HOM05D005589 ORTHO05D006948 6.9e-130 467.6 316 81.3
AL5G25010 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 2.9e-128 462.2 316 80.7
AT3G46220 Arabidopsis thaliana HOM05D005589 ORTHO05D006948 2.5e-127 459.1 316 79.7
BcaC01g01924 Brassica carinata HOM05D005589 ORTHO05D006948 2.5e-127 459.1 303 84.5
BraA06t25186Z Brassica rapa HOM05D005589 ORTHO05D006948 9.3e-127 457.2 345 76.2
Carub.0005s1206 Capsella rubella HOM05D005589 ORTHO05D006948 4.6e-126 454.9 316 79.4
CARHR154660 Cardamine hirsuta HOM05D005589 ORTHO05D006948 1.3e-123 446.8 314 78.7
Aa31LG4G15320 Aethionema arabicum HOM05D005589 ORTHO05D006948 4.0e-122 441.8 312 77.9
THA.LOC104799457 Tarenaya hassleriana HOM05D005589 ORTHO05D006948 1.5e-113 413.3 313 73.5
Duzib168G1570 Durio zibethinus HOM05D005589 ORTHO05D006948 2.6e-100 369.4 311 63.7
Ciclev10027829m.g Citrus clementina HOM05D005589 ORTHO05D006948 1.2e-97 360.5 311 63.0
FvH4_3g34630 Fragaria vesca HOM05D005589 ORTHO05D006948 2.0e-97 359.8 313 62.9
FAN11G1618 Fragaria x ananassa HOM05D005589 ORTHO05D006948 2.6e-97 359.4 312 62.5
Thecc.09G329900 Theobroma cacao HOM05D005589 ORTHO05D006948 2.6e-97 359.4 311 61.7
COL.COLO4_18425 Corchorus olitorius HOM05D005589 ORTHO05D006948 5.9e-97 358.2 311 61.1
RcHm_v2.0_Chr5g0062341 Rosa chinensis HOM05D005589 ORTHO05D006948 1.3e-96 357.1 313 62.3
FAN16G1588 Fragaria x ananassa HOM05D005589 ORTHO05D006948 2.9e-96 355.9 313 62.3
FAN21G0436 Fragaria x ananassa HOM05D005589 ORTHO05D006948 2.9e-96 355.9 316 61.4
Manes.04G029200 Manihot esculenta HOM05D005589 ORTHO05D006948 3.8e-96 355.5 312 61.9
Cfa011427 Carpinus fangiana HOM05D005589 ORTHO05D006948 5.0e-96 355.1 311 62.7
Potri.001G234300 Populus trichocarpa HOM05D005589 ORTHO05D006948 6.5e-96 354.8 311 62.1
MD11G1116800 Malus domestica HOM05D005589 ORTHO05D006948 1.4e-95 353.6 312 62.8
CiPaw.13G101800 Carya illinoinensis HOM05D005589 ORTHO05D006948 1.9e-95 353.2 308 64.0
Gohir.A05G098800 Gossypium hirsutum HOM05D005589 ORTHO05D006948 2.5e-95 352.8 313 60.4
Gorai.009G102500 Gossypium raimondii HOM05D005589 ORTHO05D006948 2.5e-95 352.8 313 60.4
Gohir.D05G098801 Gossypium hirsutum HOM05D005589 ORTHO05D006948 4.2e-95 352.1 313 60.4
MD03G1103200 Malus domestica HOM05D005589 ORTHO05D006948 1.6e-94 350.1 311 60.5
Atru.chr3.3796 Acer truncatum HOM05D005589 ORTHO05D006948 2.1e-94 349.7 311 59.8
CANSAT54G1803 Cannabis sativa HOM05D005589 ORTHO05D006948 1.4e-93 347.1 311 61.7
GSVIVG01025056001 Vitis vinifera HOM05D005589 ORTHO05D006948 1.4e-93 347.1 311 60.1
vmacro03127 Vaccinium macrocarpon HOM05D005589 ORTHO05D006948 2.0e-92 343.2 313 60.1
Ca_19212_v3 Cicer arietinum L. HOM05D005589 ORTHO05D006948 4.4e-92 342.0 311 60.1
Haze_24005 Corylus avellana HOM05D005589 ORTHO05D006948 9.7e-92 340.9 347 56.8
TWI31G1338 Tripterygium wilfordii HOM05D005589 ORTHO05D006948 9.7e-92 340.9 307 61.2
CSS0023618 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 1.3e-91 340.5 311 60.1
FAN25G3171 Fragaria x ananassa HOM05D005589 ORTHO05D006948 1.3e-91 340.5 318 60.1
CSS0045601 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 1.7e-91 340.1 311 60.1
Rhsim13G0088500 Rhododendron simsii HOM05D005589 ORTHO05D006948 2.8e-91 339.3 311 59.2
Hma1.2p1_0846F.1_g227810 Hydrangea macrophylla HOM05D005589 ORTHO05D006948 3.1e-90 335.9 312 58.7
Sopen11g030610 Solanum pennellii HOM05D005589 ORTHO05D006948 4.1e-90 335.5 313 57.5
TPR.G2986 Trifolium pratense HOM05D005589 ORTHO05D006948 5.3e-90 335.1 311 58.8
Sed0009383 Sechium edule HOM05D005589 ORTHO05D006948 7.0e-90 334.7 316 57.6
Sabra16G0140600 Salix brachista HOM05D005589 ORTHO05D006948 1.6e-89 333.6 359 53.8
arahy.Tifrunner.gnm1.ann1.3ELA68 Arachis hypogaea HOM05D005589 ORTHO05D006948 2.0e-89 333.2 311 59.5
Lj3g0027543 Lotus japonicus HOM05D005589 ORTHO05D006948 2.0e-89 333.2 307 59.0
Solyc11g072950.3 Solanum lycopersicum HOM05D005589 ORTHO05D006948 2.6e-89 332.8 313 57.2
Cpa.g.sc252.12 Carica papaya HOM05D005589 ORTHO05D006948 7.7e-89 331.3 299 61.9
Hma1.2p1_0846F.1_g227820 Hydrangea macrophylla HOM05D005589 ORTHO05D006948 1.0e-88 330.9 307 59.0
Nitab4.5_0007030g0040 Nicotiana tabacum HOM05D005589 ORTHO05D006948 1.0e-88 330.9 313 57.5
Nitab4.5_0002684g0170 Nicotiana tabacum HOM05D005589 ORTHO05D006948 1.3e-88 330.5 313 57.8
arahy.Tifrunner.gnm1.ann1.0DF5JX Arachis hypogaea HOM05D005589 ORTHO05D006948 2.9e-88 329.3 324 57.7
Hund05020 Selenicereus undatus HOM05D005589 ORTHO05D006948 5.0e-88 328.6 316 59.2
PGSC0003DMG400015549 Solanum tuberosum HOM05D005589 ORTHO05D006948 5.0e-88 328.6 313 56.5
Eucgr.J02099 Eucalyptus grandis HOM05D005589 ORTHO05D006948 8.5e-88 327.8 313 58.1
Glyma.11G145645 Glycine max HOM05D005589 ORTHO05D006948 8.5e-88 327.8 311 59.5
ClCG03G001750 Citrullus lanatus HOM05D005589 ORTHO05D006948 1.1e-87 327.4 307 58.0
Medtr4g062090 Medicago truncatula HOM05D005589 ORTHO05D006948 1.1e-87 327.4 311 57.2
VMungo1127G2244 Vigna mungo HOM05D005589 ORTHO05D006948 1.5e-87 327.0 311 59.2
CsaV3_1G033840 Cucumis sativus L. HOM05D005589 ORTHO05D006948 1.9e-87 326.6 307 58.0
Phvul.011G069300 Phaseolus vulgaris HOM05D005589 ORTHO05D006948 2.5e-87 326.2 311 58.5
SGA_v2.0_scaffold394G50722 Striga asiatica HOM05D005589 ORTHO05D006948 1.2e-86 323.9 312 56.1
Actinidia07078 Actinidia chinensis HOM05D005589 ORTHO05D006948 1.6e-86 323.6 307 58.3
Ah.08g215000 Amaranthus hybridus HOM05D005589 ORTHO05D006948 3.6e-86 322.4 314 57.3
MELO3C020678.2 Cucumis melo HOM05D005589 ORTHO05D006948 3.6e-86 322.4 307 57.3
MSTRG.21170 Avicennia marina HOM05D005589 ORTHO05D006948 4.7e-86 322.0 312 56.4
Cc01_g12110 Coffea canephora HOM05D005589 ORTHO05D006948 6.1e-86 321.6 314 56.4
Glyma.12G074800 Glycine max HOM05D005589 ORTHO05D006948 6.1e-86 321.6 311 58.2
Oeu040274.2 Olea europaea HOM05D005589 ORTHO05D006948 6.1e-86 321.6 311 55.3
EL10Ac7g15939 Beta vulgaris HOM05D005589 ORTHO05D006948 4.0e-85 318.9 306 57.5
CAN.G755.19 Capsicum annuum HOM05D005589 ORTHO05D006948 5.2e-85 318.5 308 56.2
Prupe.6G087200 Prunus persica HOM05D005589 ORTHO05D006948 1.2e-84 317.4 279 61.6
Peaxi162Scf00411g00711 Petunia axillaris HOM05D005589 ORTHO05D006948 3.3e-84 315.8 323 55.1
DCAR_015589 Daucus carota HOM05D005589 ORTHO05D006948 7.5e-84 314.7 318 54.7
Migut.D02148 Erythranthe guttata HOM05D005589 ORTHO05D006948 9.7e-84 314.3 308 54.5
Psat7g220760 Pisum sativum HOM05D005589 ORTHO05D006948 2.2e-83 313.2 311 56.9
Lj1A176T55 Lonicera japonica HOM05D005589 ORTHO05D006948 3.7e-83 312.4 311 55.3
Lalb_Chr19g0137591 Lupinus albus HOM05D005589 ORTHO05D006948 3.7e-83 312.4 312 57.4
PSO339G3114 Papaver somniferum HOM05D005589 ORTHO05D006948 8.3e-83 311.2 312 54.5
PSO384G0870 Papaver somniferum HOM05D005589 ORTHO05D006948 1.8e-82 310.1 312 54.5
Lsat_1_v5_gn_9_21601 Lactuca sativa HOM05D005589 ORTHO05D006948 1.7e-80 303.5 311 55.0
HanXRQChr08g0228221 Helianthus annuus HOM05D005589 ORTHO05D006948 3.8e-80 302.4 305 54.1
SalBow3G0177 Salvia bowleyana HOM05D005589 ORTHO05D006948 1.9e-79 300.1 306 53.3
Dinv26284 Davidia involucrata HOM05D005589 ORTHO05D006948 2.7e-78 296.2 277 58.1
Aqoxy2G01955 Aquilegia oxysepala HOM05D005589 ORTHO05D006948 1.0e-77 294.3 312 52.9
MBI05_g07866_MAGBIO Magnolia biondii HOM05D005589 ORTHO05D006948 1.0e-77 294.3 332 50.9
ECA247G1976 Erigeron canadensis HOM05D005589 ORTHO05D006948 1.5e-76 290.4 310 51.9
PGR119G2409 Punica granatum HOM05D005589 ORTHO05D006948 2.6e-76 289.7 312 53.5
AUR62009648 Chenopodium quinoa HOM05D005589 ORTHO05D006948 2.7e-73 279.6 299 55.2
unitig_37.g12679 Utricularia gibba HOM05D005589 ORTHO05D006948 3.6e-70 269.2 310 47.4
AUR62001854 Chenopodium quinoa HOM05D005589 ORTHO05D006948 7.0e-66 255.0 418 41.1
TAR623G1588 Trochodendron aralioides HOM05D005589 ORTHO05D006948 1.0e-64 251.1 248 55.2
Zm00001eb266020 Zea mays HOM05D005589 ORTHO05D006948 1.9e-63 246.9 312 46.5
Os05g0117600 Oryza sativa ssp. japonica HOM05D005589 ORTHO05D006948 1.2e-62 244.2 312 45.5
CSS0044614 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 6.1e-62 241.9 225 60.9
HPP92_025619 Vanilla planifolia HOM05D005589 ORTHO05D006948 4.0e-61 239.2 293 47.8
Mapoly0007s0143 Marchantia polymorpha HOM05D005589 ORTHO05D006948 1.3e-48 197.6 315 37.8
Pp3c8_20630 Physcomitrium patens HOM05D005589 ORTHO05D006948 2.0e-44 183.7 316 38.6
BcaB01g01018 Brassica carinata HOM05D005589 ORTHO05D006948 3.4e-44 183.0 119 84.0
AagrBONN_evm.TU.Sc2ySwM_228.2492 Anthoceros agrestis HOM05D005589 ORTHO05D006948 4.0e-37 159.5 249 42.2
Sc21g0005390 Simmondsia chinensis HOM05D005589 ORTHO05D006948 2.0e-36 157.1 142 59.2
SMO196G0111 Selaginella moellendorffii HOM05D005589 ORTHO05D006948 2.6e-36 156.8 275 34.5
Sc21g0005380 Simmondsia chinensis HOM05D005589 ORTHO05D006948 1.3e-32 144.4 125 64.8
CBR_g777 Chara braunii HOM05D005589 ORTHO05D006948 2.3e-32 143.7 291 36.1
arahy.Tifrunner.gnm1.ann1.35TLEJ Arachis hypogaea HOM05D005589 ORTHO05D006948 8.4e-27 125.2 196 39.3
CBR_g29437 Chara braunii HOM05D005589 ORTHO05D006948 2.1e-25 120.6 282 33.3
ATR0759G057 Amborella trichopoda HOM05D005589 ORTHO05D006948 2.1e-22 110.5 101 60.4
SEGI_34947 Sequoiadendron giganteum HOM05D005589 ORTHO05D006948 3.1e-21 106.7 144 41.0
ATR0759G002 Amborella trichopoda HOM05D005589 ORTHO05D006948 2.6e-20 103.6 98 52.0
Actinidia37260 Actinidia chinensis HOM05D005589 ORTHO05D006948 3.0e-16 90.1 132 41.7
Aa31LG4G15080 Aethionema arabicum HOM05D005589 ORTHO05D006948 8.4e-11 72.0 105 45.7
arahy.Tifrunner.gnm1.ann1.NIGF9J Arachis hypogaea HOM05D001394 ORTHO05D001237 1.8e-08 64.3 110 36.4
PRCOL_00006228 Prasinoderma coloniale HOM05D005589 ORTHO05D006948 7.4e-07 58.9 281 23.1


User provided reference genes

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