Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 3.7e-131 471.5 227 100.0
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 2.8e-86 322.4 208 78.8
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 5.3e-85 318.2 208 76.9
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 9.0e-85 317.4 208 77.4
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 9.0e-85 317.4 208 77.4
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 1.5e-84 316.6 183 83.6
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 1.7e-83 313.2 183 82.5
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 1.6e-81 306.6 202 75.2
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.0e-80 303.9 212 74.1
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 3.0e-80 302.4 202 75.7
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 5.1e-80 301.6 203 73.4
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 3.7e-78 295.4 185 79.5
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 2.5e-74 282.7 198 71.2
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 4.2e-74 282.0 186 74.2
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 1.2e-68 263.8 186 67.2
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 1.7e-67 260.0 188 67.0
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 5.0e-67 258.5 286 52.4
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 1.9e-66 256.5 188 66.5
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 1.9e-66 256.5 211 58.8
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 7.1e-66 254.6 211 58.3
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 1.2e-65 253.8 184 67.4
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 3.5e-65 252.3 191 61.8
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 3.5e-65 252.3 186 63.4
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 7.9e-65 251.1 184 63.0
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 1.0e-64 250.8 211 57.3
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 1.0e-64 250.8 187 63.1
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 1.8e-64 250.0 184 66.3
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 2.3e-64 249.6 186 64.5
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 3.0e-64 249.2 185 64.9
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 3.9e-64 248.8 186 65.1
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 5.1e-64 248.4 192 61.5
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 6.7e-64 248.1 186 62.4
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 8.7e-64 247.7 191 61.8
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 1.1e-63 247.3 189 65.1
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 1.1e-63 247.3 189 63.5
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 1.9e-63 246.5 186 61.8
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 1.9e-63 246.5 191 62.3
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 4.3e-63 245.4 187 65.2
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 7.4e-63 244.6 190 61.1
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 9.7e-63 244.2 191 61.3
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 9.7e-63 244.2 190 60.5
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 1.3e-62 243.8 191 61.3
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 1.6e-62 243.4 191 59.2
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 2.8e-62 242.7 212 56.1
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 2.8e-62 242.7 184 64.1
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 2.8e-62 242.7 190 60.5
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 3.7e-62 242.3 185 63.2
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 6.3e-62 241.5 184 63.6
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 6.3e-62 241.5 191 61.3
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.8e-61 240.0 189 60.3
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.4e-61 239.6 190 60.5
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 2.4e-61 239.6 187 63.1
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 4.1e-61 238.8 185 62.2
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 6.9e-61 238.0 211 56.4
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 9.0e-61 237.7 212 56.1
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 9.0e-61 237.7 189 60.3
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 9.0e-61 237.7 189 60.3
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 9.0e-61 237.7 211 56.9
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 1.2e-60 237.3 184 63.6
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 1.2e-60 237.3 181 61.9
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 1.2e-60 237.3 190 61.1
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 2.6e-60 236.1 214 56.5
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 2.6e-60 236.1 185 60.5
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 3.4e-60 235.7 184 61.4
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 3.4e-60 235.7 185 62.2
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 4.5e-60 235.3 186 60.8
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 4.5e-60 235.3 191 59.7
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 2.2e-59 233.0 207 57.5
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 8.5e-59 231.1 182 62.1
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 1.1e-58 230.7 181 60.2
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 1.4e-58 230.3 186 59.7
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 1.9e-58 229.9 186 59.7
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 3.2e-58 229.2 170 61.8
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 3.2e-58 229.2 186 59.7
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 4.2e-58 228.8 191 59.7
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 7.2e-58 228.0 182 61.5
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 9.4e-58 227.6 198 53.5
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 9.4e-58 227.6 186 57.5
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 9.4e-58 227.6 185 60.0
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 1.6e-57 226.9 171 60.8
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 3.6e-57 225.7 192 58.9
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 7.9e-57 224.6 186 57.0
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 1.0e-56 224.2 186 58.1
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 1.4e-56 223.8 216 54.2
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.3e-56 223.0 184 57.6
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 3.0e-56 222.6 193 56.5
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 8.8e-56 221.1 190 57.9
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 8.8e-56 221.1 158 65.8
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 2.4e-53 213.0 188 56.4
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 1.2e-52 210.7 178 59.6
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 1.3e-51 207.2 186 56.5
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.7e-51 206.8 176 58.0
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 2.9e-51 206.1 177 56.5
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.1e-50 204.1 187 55.1
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 2.5e-50 203.0 139 70.5
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 7.9e-49 198.0 183 53.0
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 3.0e-48 196.1 160 58.8
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 2.6e-47 193.0 158 58.9
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 1.1e-45 187.6 204 50.5
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 9.1e-45 184.5 168 56.0
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 1.5e-44 183.7 190 53.2
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 2.9e-43 179.5 137 59.9
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 6.7e-40 168.3 112 66.1
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 2.4e-37 159.8 123 61.0
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 1.5e-34 150.6 245 37.1
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.6e-33 147.1 113 62.8
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 2.6e-31 139.8 315 32.4
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 1.6e-28 130.6 136 51.5
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 8.5e-27 124.8 103 56.3
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 9.8e-23 111.3 126 46.8
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 1.6e-20 104.0 179 35.2
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 3.4e-15 86.3 78 56.4
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 7.5e-15 85.1 107 42.1
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 2.2e-14 83.6 72 52.8
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 4.9e-14 82.4 195 29.7


User provided reference genes

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