Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G55950 Arabidopsis lyrata HOM05D002253 ORTHO05D026455 6.3e-100 367.5 188 100.0
Sp1g35970 Schrenkiella parvula HOM05D002253 ORTHO05D026455 8.6e-41 171.0 192 55.2
Aa31LG10G4880 Aethionema arabicum HOM05D002253 ORTHO05D026455 2.4e-30 136.3 195 50.8
THA.LOC104821884 Tarenaya hassleriana HOM05D002253 ORTHO05D026455 1.5e-16 90.5 172 42.4
QL10p025078 Quercus lobata HOM05D002253 ORTHO05D002351 2.1e-10 70.1 95 48.4
CiPaw.15G129600 Carya illinoinensis HOM05D002253 ORTHO05D002351 3.5e-10 69.3 169 36.7
Haze_18660 Corylus avellana HOM05D002253 ORTHO05D002351 1.0e-09 67.8 91 46.2
MD14G1226200 Malus domestica HOM05D002253 ORTHO05D002351 1.8e-09 67.0 115 42.6
Potri.015G054300 Populus trichocarpa HOM05D002253 ORTHO05D002351 1.8e-09 67.0 174 36.2
CAN.G438.133 Capsicum annuum HOM05D002253 ORTHO05D002351 5.1e-09 65.5 171 36.8
Rhsim09G0108900 Rhododendron simsii HOM05D002253 ORTHO05D002351 6.7e-09 65.1 116 43.1
MD06G1215300 Malus domestica HOM05D002253 ORTHO05D002351 1.9e-08 63.5 118 39.8
Cfa019788 Carpinus fangiana HOM05D002253 ORTHO05D002351 2.5e-08 63.2 91 45.1
Lalb_Chr05g0222551 Lupinus albus HOM05D002253 ORTHO05D002351 2.5e-08 63.2 147 38.1
CSS0039080 Camellia sinensis var. sinensis HOM05D002253 ORTHO05D002351 3.3e-08 62.8 114 41.2
Hma1.2p1_1001F.1_g246520 Hydrangea macrophylla HOM05D002253 ORTHO05D002351 5.6e-08 62.0 91 42.9
Lsat_1_v5_gn_3_59460 Lactuca sativa HOM05D002253 ORTHO05D002351 5.6e-08 62.0 87 44.8
Oeu014307.1 Olea europaea HOM05D002253 ORTHO05D002351 9.6e-08 61.2 146 35.6
FAN04G1468 Fragaria x ananassa HOM05D002253 ORTHO05D002351 1.3e-07 60.8 124 39.5
FAN08G0576 Fragaria x ananassa HOM05D002253 ORTHO05D002351 1.3e-07 60.8 125 39.2
Actinidia16646 Actinidia chinensis HOM05D002253 ORTHO05D002351 2.1e-07 60.1 136 38.2
FvH4_5g12280 Fragaria vesca HOM05D002253 ORTHO05D002351 2.1e-07 60.1 125 39.2
FAN18G0057 Fragaria x ananassa HOM05D002253 ORTHO05D002351 2.1e-07 60.1 125 39.2
FAN18G1637 Fragaria x ananassa HOM05D002253 ORTHO05D002351 2.1e-07 60.1 125 39.2
Atru.chr9.822 Acer truncatum HOM05D002253 ORTHO05D002351 2.8e-07 59.7 144 36.1
QL01p043511 Quercus lobata HOM05D002253 ORTHO05D002351 2.8e-07 59.7 131 34.4
Sopen12g017580 Solanum pennellii HOM05D002253 ORTHO05D002351 2.8e-07 59.7 129 37.2
arahy.Tifrunner.gnm1.ann1.AI2V23 Arachis hypogaea HOM05D002253 ORTHO05D002351 3.7e-07 59.3 138 36.2
FAN13G2702 Fragaria x ananassa HOM05D002253 ORTHO05D002351 3.7e-07 59.3 124 38.7
Solyc03g119610.1 Solanum lycopersicum HOM05D002253 ORTHO05D002351 3.7e-07 59.3 169 35.5
Actinidia14884 Actinidia chinensis HOM05D002253 ORTHO05D002351 4.8e-07 58.9 132 39.4
Manes.14G101400 Manihot esculenta HOM05D002253 ORTHO05D002351 4.8e-07 58.9 112 39.3
Peaxi162Scf00015g00812 Petunia axillaris HOM05D002253 ORTHO05D002351 4.8e-07 58.9 186 34.4
PGR044G1243 Punica granatum HOM05D002253 ORTHO05D002351 4.8e-07 58.9 70 50.0
Sabra15G0075100 Salix brachista HOM05D002253 ORTHO05D002351 4.8e-07 58.9 128 38.3
RcHm_v2.0_Chr7g0185281 Rosa chinensis HOM05D002253 ORTHO05D002351 6.2e-07 58.5 126 38.9
Duzib248G1226 Durio zibethinus HOM05D002253 ORTHO05D002351 8.1e-07 58.2 121 39.7
Solyc12g036900.1 Solanum lycopersicum HOM05D002253 ORTHO05D002351 8.1e-07 58.2 130 38.5
TAR371G1148 Trochodendron aralioides HOM05D002253 ORTHO05D002351 8.1e-07 58.2 100 47.0
PGSC0003DMG400005716 Solanum tuberosum HOM05D002253 ORTHO05D002351 1.1e-06 57.8 146 36.3
SalBow4G2594 Salvia bowleyana HOM05D002253 ORTHO05D002351 1.4e-06 57.4 100 40.0
Sp1g11860 Schrenkiella parvula HOM05D002253 ORTHO05D002351 1.4e-06 57.4 115 38.3
Sopen03g038440 Solanum pennellii HOM05D002253 ORTHO05D002351 1.4e-06 57.4 175 33.1
TWI79G0250 Tripterygium wilfordii HOM05D002253 ORTHO05D002351 1.4e-06 57.4 87 47.1
Gohir.A09G177400 Gossypium hirsutum HOM05D002253 ORTHO05D002351 1.8e-06 57.0 157 37.6
Manes.01G012400 Manihot esculenta HOM05D002253 ORTHO05D002351 1.8e-06 57.0 79 48.1
Nitab4.5_0010492g0010 Nicotiana tabacum HOM05D002253 ORTHO05D002351 1.8e-06 57.0 118 40.7
Thecc.03G033900 Theobroma cacao HOM05D002253 ORTHO05D002351 1.8e-06 57.0 73 53.4
TWI81G0977 Tripterygium wilfordii HOM05D002253 ORTHO05D002351 1.8e-06 57.0 93 43.0
CSS0003643 Camellia sinensis var. sinensis HOM05D002253 ORTHO05D002351 2.4e-06 56.6 101 42.6
Cpa.g.sc448.1 Carica papaya HOM05D002253 ORTHO05D002351 2.4e-06 56.6 92 42.4
Dinv09805 Davidia involucrata HOM05D002253 ORTHO05D002351 2.4e-06 56.6 92 40.2
Gorai.006G194800 Gossypium raimondii HOM05D002253 ORTHO05D002351 2.4e-06 56.6 170 35.3
CiPaw.15G084000 Carya illinoinensis HOM05D002253 ORTHO05D002351 3.1e-06 56.2 128 35.9
CsaV3_5G034240 Cucumis sativus L. HOM05D002253 ORTHO05D002351 3.1e-06 56.2 100 42.0
Duzib205G1666 Durio zibethinus HOM05D002253 ORTHO05D002351 3.1e-06 56.2 73 53.4
Gohir.D09G172900 Gossypium hirsutum HOM05D002253 ORTHO05D002351 3.1e-06 56.2 160 36.2
Manes.05G137800 Manihot esculenta HOM05D002253 ORTHO05D002351 3.1e-06 56.2 190 32.6
SHI26913 Sapria himalayana HOM05D002253 ORTHO05D002351 3.1e-06 56.2 67 52.2
PGSC0003DMG400021770 Solanum tuberosum HOM05D002253 ORTHO05D002351 3.1e-06 56.2 115 39.1
PGSC0003DMG400028789 Solanum tuberosum HOM05D002253 ORTHO05D002351 3.1e-06 56.2 120 41.7
Carub.0001s1308 Capsella rubella HOM05D002253 ORTHO05D002351 4.0e-06 55.8 92 43.5
COL.COLO4_04673 Corchorus olitorius HOM05D002253 ORTHO05D002351 4.0e-06 55.8 72 51.4
Gorai.013G076400 Gossypium raimondii HOM05D002253 ORTHO05D002351 4.0e-06 55.8 121 38.8
Lj2g0015775 Lotus japonicus HOM05D002253 ORTHO05D002351 4.0e-06 55.8 139 36.7
MBI10_g16026_MAGBIO Magnolia biondii HOM05D002253 ORTHO05D002351 4.0e-06 55.8 103 39.8
Nitab4.5_0001194g0010 Nicotiana tabacum HOM05D002253 ORTHO05D002351 4.0e-06 55.8 83 51.8
Nitab4.5_0017241g0010 Nicotiana tabacum HOM05D002253 ORTHO05D002351 4.0e-06 55.8 144 34.0
SalBow8G5368 Salvia bowleyana HOM05D002253 ORTHO05D002351 4.0e-06 55.8 100 42.0
TAR629G0720 Trochodendron aralioides HOM05D002253 ORTHO05D002351 4.0e-06 55.8 132 33.3
Glyma.05G233500 Glycine max HOM05D002253 ORTHO05D002351 5.3e-06 55.5 115 40.0
SalBow8G3108 Salvia bowleyana HOM05D002253 ORTHO05D002351 5.3e-06 55.5 96 37.5
SalBow8G4143 Salvia bowleyana HOM05D002253 ORTHO05D002351 5.3e-06 55.5 96 37.5
Zm00001eb125340 Zea mays HOM05D002253 ORTHO05D002351 5.3e-06 55.5 107 38.3
Cfa018604 Carpinus fangiana HOM05D002253 ORTHO05D002351 6.9e-06 55.1 93 46.2
HanXRQChr17g0552161 Helianthus annuus HOM05D002253 ORTHO05D002351 6.9e-06 55.1 65 49.2
Peaxi162Scf00086g00101 Petunia axillaris HOM05D002253 ORTHO05D002351 6.9e-06 55.1 104 35.6
Duzib084G0173 Durio zibethinus HOM05D002253 ORTHO05D002351 9.0e-06 54.7 92 43.5
Duzib251G0566 Durio zibethinus HOM05D002253 ORTHO05D002351 9.0e-06 54.7 107 43.0
Manes.06G069300 Manihot esculenta HOM05D002253 ORTHO05D002351 9.0e-06 54.7 84 46.4
Potri.008G119800 Populus trichocarpa HOM05D002253 ORTHO05D002351 9.0e-06 54.7 129 38.8
Thecc.02G356300 Theobroma cacao HOM05D002253 ORTHO05D002351 9.0e-06 54.7 122 41.0


User provided reference genes

Program Settings