Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 5.1e-182 641.0 328 100.0
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 1.2e-178 629.8 328 97.9
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 3.6e-175 618.2 328 96.0
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 6.1e-175 617.5 328 95.1
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 6.1e-175 617.5 328 95.1
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 3.9e-174 614.8 325 96.0
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 2.0e-173 612.5 324 96.0
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 4.3e-173 611.3 328 94.5
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 7.4e-173 610.5 334 93.4
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 4.8e-172 607.8 330 94.2
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 6.9e-171 604.0 322 95.3
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 9.1e-163 577.0 325 89.8
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 7.5e-149 530.8 319 83.7
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 1.0e-137 493.8 318 75.2
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 5.2e-134 481.5 325 73.2
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 6.8e-134 481.1 317 74.8
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 2.6e-133 479.2 316 72.8
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 2.9e-132 475.7 316 72.2
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 4.9e-132 474.9 317 72.2
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 4.9e-132 474.9 317 72.2
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 4.9e-132 474.9 316 72.8
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 6.4e-132 474.6 318 71.7
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 1.8e-131 473.0 316 72.5
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 2.4e-131 472.6 317 71.9
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 2.4e-131 472.6 319 73.4
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 3.2e-131 472.2 316 71.8
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.2e-130 470.3 316 73.7
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.6e-130 469.9 316 74.1
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 5.9e-130 468.0 316 71.8
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 3.9e-129 465.3 316 72.8
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 3.9e-129 465.3 315 73.7
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 3.9e-129 465.3 315 70.2
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 4.3e-128 461.8 315 70.8
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 5.6e-128 461.5 316 71.2
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 5.6e-128 461.5 316 72.8
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 7.3e-128 461.1 315 71.7
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 9.5e-128 460.7 318 71.1
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 8.0e-127 457.6 316 69.3
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 1.8e-126 456.4 320 70.9
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 2.3e-126 456.1 315 72.1
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 5.2e-126 454.9 319 71.5
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 1.2e-125 453.8 317 69.4
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 1.5e-125 453.4 317 70.0
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 3.4e-125 452.2 315 71.1
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 1.7e-124 449.9 316 69.9
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 4.9e-124 448.4 316 69.3
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 8.3e-124 447.6 316 70.3
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 2.4e-123 446.0 318 69.2
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 5.4e-123 444.9 303 72.3
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 1.2e-122 443.7 316 69.3
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 4.6e-122 441.8 315 68.3
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 2.3e-121 439.5 316 66.8
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 3.9e-121 438.7 315 67.3
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 5.0e-121 438.3 305 68.9
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.9e-120 436.4 316 66.8
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.5e-120 436.0 305 68.5
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 7.3e-120 434.5 302 70.2
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 9.5e-120 434.1 314 68.5
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 2.8e-119 432.6 316 66.5
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 6.2e-119 431.4 303 69.0
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.4e-118 430.3 306 68.0
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 2.3e-118 429.5 323 65.3
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 3.1e-118 429.1 337 64.7
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 4.4e-117 425.2 296 70.6
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 4.4e-117 425.2 316 68.7
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 1.3e-116 423.7 363 60.6
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 2.2e-116 422.9 312 67.3
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 6.4e-116 421.4 316 65.8
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 8.3e-116 421.0 323 66.3
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 9.2e-115 417.5 308 67.2
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 1.6e-114 416.8 319 64.6
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 1.6e-114 416.8 316 65.5
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 2.3e-113 412.9 271 74.2
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 4.3e-112 408.7 318 65.4
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 7.3e-112 407.9 302 67.2
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 3.7e-108 395.6 316 61.1
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.9e-107 393.3 271 72.3
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 5.4e-107 391.7 316 63.3
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 7.1e-107 391.3 305 63.9
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 1.0e-105 387.5 297 64.6
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 1.7e-105 386.7 316 63.3
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 1.7e-105 386.7 202 94.6
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 9.9e-101 370.9 337 58.5
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 7.1e-99 364.8 314 59.6
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 6.6e-97 358.2 313 60.4
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 8.7e-97 357.8 255 70.2
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 3.6e-95 352.4 270 67.0
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 3.6e-95 352.4 270 67.0
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 7.6e-93 344.7 246 66.7
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 5.1e-89 332.0 313 52.4
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 2.8e-87 326.2 232 66.8
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 4.8e-87 325.5 320 51.2
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 7.1e-83 311.6 256 61.7
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.3e-79 300.8 314 46.5
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 2.1e-79 300.1 212 67.5
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 2.1e-79 300.1 314 45.2
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 8.1e-79 298.1 316 50.3
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 2.3e-73 280.0 216 65.3
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 5.7e-72 275.4 180 72.8
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.3e-68 264.2 303 45.2
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.1e-67 261.2 232 56.5
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 9.3e-67 258.1 268 50.7
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 1.8e-65 253.8 330 46.1
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 3.3e-56 223.0 316 40.5
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 3.2e-51 206.5 145 69.0
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 8.5e-44 181.8 127 65.4
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 6.1e-42 175.6 129 64.3
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 2.2e-39 167.2 228 40.8
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 2.6e-32 143.7 247 36.4
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 7.0e-30 135.6 103 64.1
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.4e-22 110.5 93 57.0
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 9.2e-22 108.6 179 36.3
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 2.0e-21 107.5 87 60.9
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 2.3e-20 104.0 69 76.8
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 9.8e-08 62.0 70 48.6
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 7.0e-06 55.8 44 54.5


User provided reference genes

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