Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 9.6e-189 663.3 327 100.0
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 8.1e-188 660.2 327 99.1
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 5.3e-187 657.5 327 98.8
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 2.3e-182 642.1 328 97.0
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 1.1e-181 639.8 328 96.0
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 9.6e-181 636.7 329 96.4
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 1.5e-178 629.4 329 95.1
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 1.0e-177 626.7 329 94.5
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 1.7e-177 625.9 329 94.5
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 1.7e-177 625.9 329 94.5
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 1.1e-176 623.2 330 94.2
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 1.1e-176 623.2 330 94.2
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 6.5e-153 544.3 323 83.6
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 3.6e-151 538.5 320 82.2
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 3.3e-149 531.9 325 80.9
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 2.2e-148 529.3 318 80.5
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 3.7e-148 528.5 327 82.9
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 6.3e-148 527.7 317 80.4
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 6.3e-148 527.7 317 80.4
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.4e-147 526.6 317 80.4
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 4.1e-147 525.0 319 80.3
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 5.3e-147 524.6 317 80.1
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 1.6e-146 523.1 322 80.7
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 2.0e-146 522.7 318 79.9
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 2.6e-146 522.3 327 78.0
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 1.3e-145 520.0 327 77.7
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.3e-145 520.0 327 77.7
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 1.7e-145 519.6 327 77.1
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 3.8e-145 518.5 327 77.4
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 1.1e-144 516.9 327 77.7
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 1.5e-144 516.5 325 77.5
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.5e-144 516.5 327 77.1
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 3.2e-144 515.4 319 78.4
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 4.2e-144 515.0 327 77.1
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 5.5e-144 514.6 321 78.8
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 6.1e-143 511.1 325 76.9
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 8.0e-143 510.8 322 78.3
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 1.0e-142 510.4 330 76.7
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 3.0e-142 508.8 319 79.0
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 4.0e-142 508.4 335 75.5
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 6.7e-142 507.7 290 82.4
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 8.8e-142 507.3 325 76.3
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 1.5e-141 506.5 325 76.3
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 1.5e-141 506.5 327 75.5
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 9.7e-141 503.8 325 75.7
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 1.7e-140 503.1 335 74.9
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 8.3e-140 500.7 325 75.4
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 1.8e-139 499.6 329 76.0
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 7.0e-139 497.7 331 73.7
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 7.7e-138 494.2 330 75.5
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 7.7e-138 494.2 330 75.5
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 1.3e-137 493.4 330 75.2
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 1.7e-137 493.0 322 76.1
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 8.5e-137 490.7 300 79.3
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 8.5e-137 490.7 336 74.1
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 1.9e-136 489.6 324 73.1
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 5.5e-136 488.0 315 76.2
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 7.2e-136 487.6 328 75.9
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 3.6e-135 485.3 331 72.5
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 1.8e-134 483.0 327 73.7
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 2.3e-134 482.6 332 72.6
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 2.0e-133 479.6 327 74.3
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 7.5e-133 477.6 319 74.6
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 1.7e-132 476.5 284 80.6
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 1.4e-131 473.4 284 79.6
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 1.2e-130 470.3 331 71.9
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 2.3e-129 466.1 288 78.5
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 2.8e-127 459.1 317 73.5
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 5.7e-125 451.4 320 70.3
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 2.2e-124 449.5 433 58.2
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 7.8e-122 441.0 320 71.9
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 2.9e-121 439.1 317 71.6
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 5.0e-121 438.3 395 59.2
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 1.8e-118 429.9 285 75.8
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 8.9e-118 427.6 319 65.5
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 1.5e-117 426.8 271 77.1
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 1.5e-117 426.8 312 67.6
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 4.4e-117 425.2 268 76.9
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 4.9e-116 421.8 261 76.6
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 6.4e-116 421.4 341 64.2
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 1.9e-115 419.9 270 75.6
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 4.6e-114 415.2 302 69.5
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 8.6e-113 411.0 261 76.6
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 9.5e-112 407.5 260 76.2
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 2.1e-111 406.4 291 70.4
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 1.5e-109 400.2 316 62.7
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 1.6e-106 390.2 327 63.6
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 6.0e-106 388.3 306 68.0
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 2.5e-104 382.9 322 61.8
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 1.2e-103 380.6 288 62.5
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 6.2e-103 378.3 254 73.6
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 7.5e-101 371.3 291 60.5
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 9.9e-101 370.9 291 60.8
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 7.1e-99 364.8 323 60.4
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 1.1e-96 357.5 286 66.1
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 2.1e-95 353.2 261 65.1
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 1.8e-94 350.1 649 37.8
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 1.1e-88 330.9 193 85.0
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 8.1e-87 324.7 319 57.4
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 2.6e-85 319.7 206 74.8
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 5.4e-83 312.0 318 53.5
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 3.1e-78 296.2 193 79.3
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 1.7e-76 290.4 232 65.9
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 4.9e-76 288.9 339 52.5
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 6.0e-74 282.0 199 65.3
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 6.2e-71 271.9 222 58.6
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 7.1e-67 258.5 164 76.8
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 4.6e-66 255.8 145 84.8
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 4.3e-64 249.2 175 69.7
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 1.3e-63 247.7 245 56.3
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.4e-59 234.2 327 46.5
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 1.6e-58 230.7 168 68.5
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 6.1e-58 228.8 162 68.5
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 2.5e-43 180.3 131 69.5
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 6.7e-41 172.2 101 78.2
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 9.1e-38 161.8 90 83.3
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 3.0e-33 146.7 272 36.4
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 2.8e-31 140.2 272 30.9
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 1.0e-28 131.7 92 66.3
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 1.0e-25 121.7 80 72.5
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 1.5e-19 101.3 370 25.9
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 9.8e-16 88.6 53 86.8
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 3.6e-10 70.1 46 73.9
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 2.2e-07 60.8 66 50.0
MSTRG.1710 Avicennia marina HOM05D006118 ORTHO05D007750 7.0e-06 55.8 30 76.7
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 7.0e-06 55.8 57 52.6
BolC6t35198H Brassica oleracea HOM05D006118 ORTHO05D007750 9.2e-06 55.5 41 78.0
HPP92_016211 Vanilla planifolia HOM05D006118 ORTHO05D007750 9.2e-06 55.5 62 46.8


User provided reference genes

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