Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G54760 Arabidopsis lyrata HOM05D008365 ORTHO05D014862 1.3e-137 493.0 240 100.0
AT1G48180 Arabidopsis thaliana HOM05D008365 ORTHO05D014862 1.2e-114 416.8 240 86.2
Carub.0001s4052 Capsella rubella HOM05D008365 ORTHO05D014862 7.3e-93 344.4 242 73.1
CARHR163030 Cardamine hirsuta HOM05D008365 ORTHO05D014862 1.3e-89 333.6 228 74.1
AL1G59580 Arabidopsis lyrata HOM05D008365 ORTHO05D014862 8.3e-89 330.9 244 70.9
AL1G61110 Arabidopsis lyrata HOM05D008365 ORTHO05D014862 9.2e-88 327.4 241 71.4
Carub.0001s4053 Capsella rubella HOM05D008365 ORTHO05D014862 1.5e-82 310.1 242 69.8
Carub.0001s4054 Capsella rubella HOM05D008365 ORTHO05D014862 5.8e-82 308.1 240 68.8
CARHR063260 Cardamine hirsuta HOM05D008365 ORTHO05D014862 2.7e-71 272.7 240 62.5
CARHR063700 Cardamine hirsuta HOM05D008365 ORTHO05D014862 8.6e-70 267.7 235 60.4
CARHR263650 Cardamine hirsuta HOM05D008365 ORTHO05D014862 5.2e-67 258.5 200 67.5
CARHR063690 Cardamine hirsuta HOM05D008365 ORTHO05D014862 1.5e-66 256.9 217 64.5
AT1G51670 Arabidopsis thaliana HOM05D008365 ORTHO05D014862 2.1e-55 219.9 163 73.0
Carub.0004s1487 Capsella rubella HOM05D008365 ORTHO05D011149 1.3e-52 210.7 218 52.8
AL6G29250 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 5.3e-51 205.3 250 46.4
Sp7g27580 Schrenkiella parvula HOM05D008365 ORTHO05D011149 7.1e-48 194.9 255 47.1
AL6G29230 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 2.1e-47 193.4 253 43.9
AL7G22490 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 3.5e-47 192.6 250 44.0
AT4G29760 Arabidopsis thaliana HOM05D008365 ORTHO05D011149 8.7e-46 188.0 257 42.0
Thhalv10026005m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 1.5e-45 187.2 246 43.9
Carub.0004s1486 Capsella rubella HOM05D008365 ORTHO05D011149 2.5e-45 186.4 252 43.3
AL7G22500 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 5.6e-45 185.3 255 43.5
CARHR215270 Cardamine hirsuta HOM05D008365 ORTHO05D011149 9.6e-45 184.5 252 44.0
BcaB03g12656 Brassica carinata HOM05D008365 ORTHO05D011149 1.3e-44 184.1 255 43.9
A08p19110 Brassica napus HOM05D008365 ORTHO05D011149 2.8e-44 183.0 254 44.5
BraA08t33873Z Brassica rapa HOM05D008365 ORTHO05D011149 2.8e-44 183.0 254 44.5
AL7G22480 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 4.8e-44 182.2 253 42.7
C03p88560 Brassica napus HOM05D008365 ORTHO05D011149 4.8e-44 182.2 217 48.8
A08p19120 Brassica napus HOM05D008365 ORTHO05D011149 4.0e-43 179.1 254 43.3
C03p88570 Brassica napus HOM05D008365 ORTHO05D011149 4.0e-43 179.1 248 44.0
AT4G29770 Arabidopsis thaliana HOM05D008365 ORTHO05D011149 9.0e-43 177.9 253 40.3
CARHR063300 Cardamine hirsuta HOM05D008365 ORTHO05D116364 1.2e-42 177.6 126 69.8
Thhalv10011766m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 1.7e-41 173.7 215 49.3
BcaC01g01143 Brassica carinata HOM05D008365 ORTHO05D011149 8.4e-41 171.4 254 42.1
CARHR237670 Cardamine hirsuta HOM05D008365 ORTHO05D011149 1.2e-39 167.5 212 47.6
Carub.0008s0192 Capsella rubella HOM05D008365 ORTHO05D011149 2.7e-39 166.4 252 40.1
BcaC09g51862 Brassica carinata HOM05D008365 ORTHO05D011149 8.7e-38 161.4 255 39.6
BraA08t33874Z Brassica rapa HOM05D008365 ORTHO05D011149 7.4e-37 158.3 254 39.4
A01p07560 Brassica napus HOM05D008365 ORTHO05D011149 2.8e-36 156.4 255 39.2
BolC1t00807H Brassica oleracea HOM05D008365 ORTHO05D011149 2.8e-36 156.4 248 40.3
Thhalv10027444m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 2.8e-36 156.4 262 39.7
A07p02810 Brassica napus HOM05D008365 ORTHO05D011149 1.4e-35 154.1 231 41.6
BraA07t28079Z Brassica rapa HOM05D008365 ORTHO05D011149 1.4e-35 154.1 231 41.6
A08p19130 Brassica napus HOM05D008365 ORTHO05D011149 9.0e-35 151.4 255 38.8
BraA01t00699Z Brassica rapa HOM05D008365 ORTHO05D011149 2.0e-34 150.2 249 40.2
C01p08200 Brassica napus HOM05D008365 ORTHO05D011149 2.6e-34 149.8 248 39.9
C03p88590 Brassica napus HOM05D008365 ORTHO05D011149 7.6e-34 148.3 254 37.4
BcaB03g12655 Brassica carinata HOM05D008365 ORTHO05D011149 1.0e-33 147.9 256 37.5
CARHR251110 Cardamine hirsuta HOM05D008365 ORTHO05D011149 4.9e-33 145.6 224 42.4
BcaNung02965 Brassica carinata HOM05D008365 ORTHO05D011149 4.8e-28 129.0 163 44.8
CARHR063270 Cardamine hirsuta HOM05D008365 ORTHO05D116001 2.1e-23 113.6 84 71.4
CARHR237830 Cardamine hirsuta HOM05D008365 ORTHO05D017520 4.2e-16 89.4 185 33.0
CARHR063280 Cardamine hirsuta HOM05D008365 ORTHO05D116017 1.6e-15 87.4 85 55.3
BraA01t00768Z Brassica rapa HOM05D016251 ORTHO05D017520 2.3e-14 83.6 221 29.9
AL7G23550 Arabidopsis lyrata HOM05D008615 ORTHO05D021443 3.0e-14 83.2 222 29.7
BcaC09g51771 Brassica carinata HOM05D016251 ORTHO05D017520 3.0e-14 83.2 220 29.1
A01p08230 Brassica napus HOM05D016251 ORTHO05D017520 3.0e-14 83.2 221 29.9
BcaNung01345 Brassica carinata HOM05D008615 ORTHO05D021443 6.7e-14 82.0 192 31.8
Thhalv10000684m.g Eutrema salsugineum HOM05D008365 ORTHO05D017520 6.7e-14 82.0 194 31.4
BcaC09g52200 Brassica carinata HOM05D016251 ORTHO05D017520 1.1e-13 81.3 221 28.5
C01p09200 Brassica napus HOM05D016251 ORTHO05D017520 1.1e-13 81.3 221 28.5
AT5G18040 Arabidopsis thaliana HOM05D008365 ORTHO05D081110 2.6e-13 80.1 81 50.6
Thhalv10026918m.g Eutrema salsugineum HOM05D008615 ORTHO05D011779 9.7e-13 78.2 224 29.0
Carub.0007s1099 Capsella rubella HOM05D008615 ORTHO05D011779 5.3e-11 72.4 183 30.1
BcaC09g52217 Brassica carinata HOM05D008615 ORTHO05D011779 5.9e-10 68.9 149 28.2
C01p09790 Brassica napus HOM05D008615 ORTHO05D011779 5.9e-10 68.9 149 28.2
BolC1t00941H Brassica oleracea HOM05D008615 ORTHO05D011779 5.9e-10 68.9 149 28.2
C01p09880 Brassica napus HOM05D008615 ORTHO05D011779 2.2e-09 67.0 220 26.4
BolC1t00951H Brassica oleracea HOM05D008615 ORTHO05D011779 2.2e-09 67.0 220 26.4
BcaC09g52204 Brassica carinata HOM05D008615 ORTHO05D011779 5.0e-09 65.9 221 26.7
AL5G23100 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 8.5e-09 65.1 231 27.3
AT5G18065 Arabidopsis thaliana HOM05D008365 ORTHO05D011149 8.5e-09 65.1 66 53.0
BraA01t00798Z Brassica rapa HOM05D008615 ORTHO05D011779 8.5e-09 65.1 220 26.4
AL5G23010 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 3.6e-07 59.7 236 25.0
Carub.0007s2333 Capsella rubella HOM05D000344 ORTHO05D003292 8.0e-07 58.5 209 25.4
AL4G38030 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 2.3e-06 57.0 190 30.0
BolC3t21165H Brassica oleracea HOM05D008365 ORTHO05D011149 2.3e-06 57.0 77 45.5


User provided reference genes

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