Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G54480 Arabidopsis lyrata HOM05D008359 ORTHO05D010300 6.1e-37 158.3 197 100.0
AT1G47970 Arabidopsis thaliana HOM05D008359 ORTHO05D010300 9.0e-33 144.4 199 97.0
CARHR037590 Cardamine hirsuta HOM05D008359 ORTHO05D010300 8.2e-26 121.3 171 86.5
Sp1g34910 Schrenkiella parvula HOM05D008359 ORTHO05D010300 4.7e-21 105.5 107 90.7
A06p04780 Brassica napus HOM05D008359 ORTHO05D010300 3.9e-20 102.4 107 87.9
Carub.0001s3705 Capsella rubella HOM05D008359 ORTHO05D010300 8.8e-20 101.3 166 91.6
BolC6t35360H Brassica oleracea HOM05D008359 ORTHO05D010300 2.0e-19 100.1 110 86.4
BraA06t23682Z Brassica rapa HOM05D008359 ORTHO05D010300 2.2e-18 96.7 107 86.9
BcaC08g42993 Brassica carinata HOM05D008359 ORTHO05D010300 2.6e-16 89.7 54 88.9
Aa31LG10G5820 Aethionema arabicum HOM05D000167 ORTHO05D000465 1.5e-14 84.0 96 88.5
C06p02350 Brassica napus HOM05D008359 ORTHO05D010300 5.5e-14 82.0 54 83.3
BcaB07g33802 Brassica carinata HOM05D008359 ORTHO05D010300 2.8e-10 69.7 56 80.4
Prupe.1G113500 Prunus persica HOM05D008359 ORTHO05D010300 3.7e-10 69.3 89 82.0
CARHR092430 Cardamine hirsuta HOM05D014329 ORTHO05D014763 1.1e-09 67.8 168 47.0
CANSAT78G0680 Cannabis sativa HOM05D008359 ORTHO05D010300 2.0e-08 63.5 86 81.4
MD16G1149800 Malus domestica HOM05D008359 ORTHO05D010300 2.6e-08 63.2 33 93.9
Atru.chr4.3060 Acer truncatum HOM05D008359 ORTHO05D010300 4.5e-08 62.4 88 81.8
SGA_v2.0_scaffold246G44799 Striga asiatica HOM05D008359 ORTHO05D010300 5.9e-08 62.0 40 85.0
Haze_01345 Corylus avellana HOM05D008359 ORTHO05D010300 7.7e-08 61.6 33 90.9
Sp3g15360 Schrenkiella parvula HOM05D009524 ORTHO05D014763 1.0e-07 61.2 33 90.9
FAN07G0737 Fragaria x ananassa HOM05D008359 ORTHO05D010300 1.3e-07 60.8 35 82.9
Nitab4.5_0000289g0010 Nicotiana tabacum HOM05D008359 ORTHO05D010300 1.3e-07 60.8 34 88.2
FAN12G0153 Fragaria x ananassa HOM05D008359 ORTHO05D010300 2.9e-07 59.7 82 81.7
MBI19_g03271_MAGBIO Magnolia biondii HOM05D008359 ORTHO05D010300 2.9e-07 59.7 37 83.8
SGA_v2.0_scaffold227G43229 Striga asiatica HOM05D008359 ORTHO05D010300 2.9e-07 59.7 38 81.6
unitig_749.g13356 Utricularia gibba HOM05D008359 ORTHO05D010300 6.5e-07 58.5 63 58.7
PGR031G3777 Punica granatum HOM05D008359 ORTHO05D010300 8.5e-07 58.2 35 85.7
C05p49300 Brassica napus HOM05D014329 ORTHO05D014763 1.1e-06 57.8 53 66.0
RcHm_v2.0_Chr4g0425941 Rosa chinensis HOM05D008359 ORTHO05D010300 1.1e-06 57.8 32 87.5
BcaC05g28822 Brassica carinata HOM05D014329 ORTHO05D014763 1.9e-06 57.0 43 69.8
CiPaw.02G072800 Carya illinoinensis HOM05D008359 ORTHO05D010300 1.9e-06 57.0 59 62.7
HanXRQChr01g0022331 Helianthus annuus HOM05D008359 ORTHO05D010300 1.9e-06 57.0 38 78.9
Nitab4.5_0004298g0050 Nicotiana tabacum HOM05D008359 ORTHO05D010300 1.9e-06 57.0 35 82.9
Duzib212G0105 Durio zibethinus HOM05D008359 ORTHO05D010300 2.5e-06 56.6 108 73.1
Lj3P834T33 Lonicera japonica HOM05D008359 ORTHO05D010300 2.5e-06 56.6 28 96.4
MD13G1149500 Malus domestica HOM05D008359 ORTHO05D010300 2.5e-06 56.6 107 64.5
Oeu044729.1 Olea europaea HOM05D008359 ORTHO05D010300 2.5e-06 56.6 29 93.1
ECA246G4255 Erigeron canadensis HOM05D008359 ORTHO05D010300 3.2e-06 56.2 33 81.8
MSTRG.27929 Avicennia marina HOM05D008359 ORTHO05D010300 4.2e-06 55.8 38 81.6
Migut.N00029 Erythranthe guttata HOM05D008359 ORTHO05D010300 5.5e-06 55.5 46 76.1
Sabra10G0114500 Salix brachista HOM05D008359 ORTHO05D010300 7.2e-06 55.1 29 89.7
Manes.03G207300 Manihot esculenta HOM05D008359 ORTHO05D010300 9.4e-06 54.7 29 89.7
TAR633G1589 Trochodendron aralioides HOM05D008359 ORTHO05D010300 9.4e-06 54.7 36 75.0


User provided reference genes

Program Settings