Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G53920 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 6.2e-68 260.8 140 100.0
Carub.0007s1276 Capsella rubella HOM05D005733 ORTHO05D007442 2.1e-23 112.8 138 50.7
CARHR235730 Cardamine hirsuta HOM05D005733 ORTHO05D007442 7.9e-23 110.9 138 50.0
Thhalv10025984m.g Eutrema salsugineum HOM05D005733 ORTHO05D007442 3.0e-22 109.0 136 50.0
AL7G24580 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 3.9e-22 108.6 137 49.6
AT4G28030 Arabidopsis thaliana HOM05D005733 ORTHO05D007442 5.1e-22 108.2 138 49.3
Sp7g25980 Schrenkiella parvula HOM05D005733 ORTHO05D007442 8.7e-22 107.5 136 49.3
BcaC06g32650 Brassica carinata HOM05D005733 ORTHO05D007442 1.5e-21 106.7 136 48.5
C07p55880 Brassica napus HOM05D005733 ORTHO05D007442 1.5e-21 106.7 130 50.0
A03p57670 Brassica napus HOM05D005733 ORTHO05D007442 2.5e-21 105.9 136 48.5
BraA03t14833Z Brassica rapa HOM05D005733 ORTHO05D007442 2.5e-21 105.9 136 48.5
Aa31sc193G30 Aethionema arabicum HOM05D005733 ORTHO05D007442 4.0e-19 98.6 134 47.0
Aa31LG7G2230 Aethionema arabicum HOM05D005733 ORTHO05D007442 5.3e-19 98.2 134 45.5
THA.LOC104811821 Tarenaya hassleriana HOM05D005733 ORTHO05D007442 2.2e-17 92.8 136 44.9
AL7G30680 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 3.2e-16 89.0 110 50.9
AL6G37990 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 9.3e-16 87.4 110 50.0
AL1G31260 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 1.2e-15 87.0 110 50.0
C01p24460 Brassica napus HOM05D005733 ORTHO05D007442 1.0e-14 84.0 52 80.8
Eucgr.C01245 Eucalyptus grandis HOM05D005733 ORTHO05D007442 6.7e-14 81.3 53 67.9
Ca_21184_v3 Cicer arietinum L. HOM05D005733 ORTHO05D007442 8.7e-14 80.9 54 70.4
arahy.Tifrunner.gnm1.ann1.GE8FUD Arachis hypogaea HOM05D005733 ORTHO05D007442 1.1e-13 80.5 136 39.7
Cpa.g.sc75.16 Carica papaya HOM05D005733 ORTHO05D007442 1.9e-13 79.7 131 39.7
arahy.Tifrunner.gnm1.ann1.0JVE27 Arachis hypogaea HOM05D005733 ORTHO05D007442 2.5e-13 79.3 136 39.7
Peaxi162Scf00525g00817 Petunia axillaris HOM05D005733 ORTHO05D007442 2.5e-13 79.3 82 48.8
COL.COLO4_27474 Corchorus olitorius HOM05D005733 ORTHO05D007442 3.3e-13 79.0 137 38.0
TPR.G5298 Trifolium pratense HOM05D005733 ORTHO05D007442 3.3e-13 79.0 54 68.5
Cfa013546 Carpinus fangiana HOM05D005733 ORTHO05D007442 5.7e-13 78.2 86 51.2
Atru.chr7.506 Acer truncatum HOM05D005733 ORTHO05D007442 7.4e-13 77.8 83 50.6
Aqoxy7G03235 Aquilegia oxysepala HOM05D005733 ORTHO05D007442 7.4e-13 77.8 85 47.1
Haze_22166 Corylus avellana HOM05D005733 ORTHO05D007442 7.4e-13 77.8 123 41.5
Duzib187G0641 Durio zibethinus HOM05D005733 ORTHO05D007442 9.6e-13 77.4 54 66.7
Nn4g23704 Nelumbo nucifera HOM05D005733 ORTHO05D007442 9.6e-13 77.4 78 50.0
Psat4g048120 Pisum sativum HOM05D005733 ORTHO05D007442 9.6e-13 77.4 56 66.1
Potri.006G176500 Populus trichocarpa HOM05D005733 ORTHO05D007442 9.6e-13 77.4 133 39.1
Solyc07g006340.3 Solanum lycopersicum HOM05D005733 ORTHO05D007442 9.6e-13 77.4 57 61.4
PGSC0003DMG402011224 Solanum tuberosum HOM05D005733 ORTHO05D007442 9.6e-13 77.4 57 61.4
Lalb_Chr13g0300531 Lupinus albus HOM05D005733 ORTHO05D007442 1.3e-12 77.0 56 64.3
Sabra06G0134700 Salix brachista HOM05D005733 ORTHO05D007442 1.3e-12 77.0 79 50.6
Cc06_g14000 Coffea canephora HOM05D005733 ORTHO05D007442 1.6e-12 76.6 79 48.1
Manes.06G030000 Manihot esculenta HOM05D005733 ORTHO05D007442 1.6e-12 76.6 83 50.6
Nitab4.5_0005985g0010 Nicotiana tabacum HOM05D005733 ORTHO05D007442 1.6e-12 76.6 82 47.6
Hund08988 Selenicereus undatus HOM05D005733 ORTHO05D007442 1.6e-12 76.6 80 50.0
Medtr4g129490 Medicago truncatula HOM05D005733 ORTHO05D007442 2.1e-12 76.3 58 63.8
Sopen07g002430 Solanum pennellii HOM05D005733 ORTHO05D007442 2.1e-12 76.3 57 61.4
MBI14_g08080_MAGBIO Magnolia biondii HOM05D005733 ORTHO05D007442 2.8e-12 75.9 137 36.5
TWI63G0727 Tripterygium wilfordii HOM05D005733 ORTHO05D007442 2.8e-12 75.9 82 47.6
TAR383G0601 Trochodendron aralioides HOM05D005733 ORTHO05D007442 3.7e-12 75.5 127 38.6
Glyma.13G091800 Glycine max HOM05D005733 ORTHO05D007442 4.8e-12 75.1 53 66.0
ATR0580G232 Amborella trichopoda HOM05D005733 ORTHO05D007442 6.3e-12 74.7 59 61.0
EL10Ac8g18867 Beta vulgaris HOM05D005733 ORTHO05D007442 6.3e-12 74.7 79 48.1
CSS0014936 Camellia sinensis var. sinensis HOM05D005733 ORTHO05D007442 6.3e-12 74.7 84 44.0
CiPaw.07G186800 Carya illinoinensis HOM05D005733 ORTHO05D007442 6.3e-12 74.7 58 62.1
Gorai.004G103800 Gossypium raimondii HOM05D005733 ORTHO05D007442 6.3e-12 74.7 133 37.6
VMungo1215G3105 Vigna mungo HOM05D005733 ORTHO05D007442 6.3e-12 74.7 47 72.3
CAN.G1870.3 Capsicum annuum HOM05D005733 ORTHO05D007442 8.2e-12 74.3 56 58.9
CsaV3_7G001070 Cucumis sativus L. HOM05D005733 ORTHO05D007442 1.1e-11 73.9 138 35.5
Migut.J01418 Erythranthe guttata HOM05D005733 ORTHO05D007442 1.1e-11 73.9 79 48.1
QL02p095666 Quercus lobata HOM05D005733 ORTHO05D007442 1.1e-11 73.9 138 36.2
Sed0012123 Sechium edule HOM05D005733 ORTHO05D007442 1.1e-11 73.9 134 36.6
Sc08g0005630 Simmondsia chinensis HOM05D005733 ORTHO05D007442 1.1e-11 73.9 82 46.3
MSTRG.19675 Avicennia marina HOM05D005733 ORTHO05D007442 1.4e-11 73.6 79 49.4
Gohir.D08G097100 Gossypium hirsutum HOM05D005733 ORTHO05D007442 1.4e-11 73.6 50 68.0
Lj4g0011389 Lotus japonicus HOM05D005733 ORTHO05D007442 1.4e-11 73.6 138 37.0
Oeu058827.1 Olea europaea HOM05D005733 ORTHO05D007442 1.4e-11 73.6 79 49.4
Phvul.003G151100 Phaseolus vulgaris HOM05D005733 ORTHO05D007442 1.4e-11 73.6 47 70.2
RcHm_v2.0_Chr4g0404931 Rosa chinensis HOM05D005733 ORTHO05D007442 1.4e-11 73.6 86 46.5
DCAR_014719 Daucus carota HOM05D005733 ORTHO05D007442 1.8e-11 73.2 52 65.4
Glyma.17G068500 Glycine max HOM05D005733 ORTHO05D007442 1.8e-11 73.2 47 70.2
MD16G1262600 Malus domestica HOM05D005733 ORTHO05D007442 1.8e-11 73.2 55 61.8
PSO063G5638 Papaver somniferum HOM05D005733 ORTHO05D007442 1.8e-11 73.2 82 50.0
SalBow6G0174 Salvia bowleyana HOM05D005733 ORTHO05D007442 1.8e-11 73.2 79 48.1
Thecc.09G161700 Theobroma cacao HOM05D005733 ORTHO05D007442 1.8e-11 73.2 81 48.1
HPP92_025686 Vanilla planifolia HOM05D005733 ORTHO05D007442 1.8e-11 73.2 55 63.6
Lsat_1_v5_gn_8_64360 Lactuca sativa HOM05D005733 ORTHO05D007442 2.4e-11 72.8 47 70.2
SGA_v2.0_scaffold66G22515 Striga asiatica HOM05D005733 ORTHO05D007442 2.4e-11 72.8 84 44.0
ClCG02G004040 Citrullus lanatus HOM05D005733 ORTHO05D007442 3.1e-11 72.4 84 42.9
FAN05G3225 Fragaria x ananassa HOM05D005733 ORTHO05D007442 3.1e-11 72.4 123 38.2
FAN05G4341 Fragaria x ananassa HOM05D005733 ORTHO05D007442 3.1e-11 72.4 123 38.2
Prupe.1G097300 Prunus persica HOM05D005733 ORTHO05D007442 3.1e-11 72.4 86 46.5
CANSAT11G0464 Cannabis sativa HOM05D005733 ORTHO05D007442 4.1e-11 72.0 130 36.2
HanXRQChr10g0284091 Helianthus annuus HOM05D005733 ORTHO05D007442 5.3e-11 71.6 84 45.2
Hma1.2p1_1531F.1_g289230 Hydrangea macrophylla HOM05D005733 ORTHO05D007442 9.0e-11 70.9 50 66.0
Lj9A728T23 Lonicera japonica HOM05D005733 ORTHO05D007442 9.0e-11 70.9 50 62.0
Rhsim01G0012100 Rhododendron simsii HOM05D005733 ORTHO05D007442 9.0e-11 70.9 53 56.6
vmacro13073 Vaccinium macrocarpon HOM05D005733 ORTHO05D007442 9.0e-11 70.9 53 56.6
MELO3C013348.2 Cucumis melo HOM05D005733 ORTHO05D007442 1.2e-10 70.5 84 41.7
FAN17G0482 Fragaria x ananassa HOM05D005733 ORTHO05D007442 1.2e-10 70.5 59 57.6
GSVIVG01023749001 Vitis vinifera HOM05D005733 ORTHO05D007442 1.5e-10 70.1 81 48.1
Zm00001eb412590 Zea mays HOM05D005733 ORTHO05D007442 1.5e-10 70.1 80 46.2
FvH4_4g23510 Fragaria vesca HOM05D005733 ORTHO05D007442 2.0e-10 69.7 55 60.0
AL3G40460 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 3.4e-10 68.9 103 45.6
Ciclev10010607m.g Citrus clementina HOM05D005733 ORTHO05D007442 4.5e-10 68.6 81 45.7
FAN12G3847 Fragaria x ananassa HOM05D005733 ORTHO05D007442 4.5e-10 68.6 71 52.1
Actinidia20956 Actinidia chinensis HOM05D005733 ORTHO05D007442 1.7e-09 66.6 47 61.7
PSO782G5004 Papaver somniferum HOM05D005733 ORTHO05D007442 2.9e-09 65.9 118 39.8
PGR142G3644 Punica granatum HOM05D005733 ORTHO05D007442 2.9e-09 65.9 50 62.0
CDE02G3066 Ceratophyllum demersum HOM05D005733 ORTHO05D007442 1.9e-08 63.2 46 63.0
SEGI_16930 Sequoiadendron giganteum HOM05D005733 ORTHO05D007442 1.9e-08 63.2 51 54.9
Psat4g010480 Pisum sativum HOM05D005733 ORTHO05D007442 3.6e-07 58.9 45 62.2


User provided reference genes

Program Settings