Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G53820 Arabidopsis lyrata HOM05D025627 ORTHO05D031321 3.7e-238 827.8 412 100.0
AL1G60640 Arabidopsis lyrata HOM05D025627 ORTHO05D031321 1.7e-219 765.8 414 93.0
BcaB01g06088 Brassica carinata HOM05D020281 ORTHO05D021971 2.6e-29 134.0 413 30.5
C03p08290 Brassica napus HOM05D020281 ORTHO05D021971 2.5e-24 117.5 305 33.1
AT1G52390 Arabidopsis thaliana HOM05D025627 ORTHO05D031321 9.1e-19 99.0 97 57.7
Thhalv10023491m.g Eutrema salsugineum HOM05D020281 ORTHO05D021971 8.5e-17 92.4 430 25.1
CARHR166160 Cardamine hirsuta HOM05D011679 ORTHO05D012451 5.7e-13 79.7 130 36.2
Thhalv10027969m.g Eutrema salsugineum HOM05D001456 ORTHO05D011781 4.1e-11 73.6 102 38.2
CARHR172830 Cardamine hirsuta HOM05D001456 ORTHO05D011865 3.5e-10 70.5 162 30.9
AL7G21380 Arabidopsis lyrata HOM05D001456 ORTHO05D011865 2.9e-09 67.4 105 36.2
BraA09t40691Z Brassica rapa HOM05D001456 ORTHO05D011781 5.0e-09 66.6 105 33.3
A09p52620 Brassica napus HOM05D001456 ORTHO05D011781 6.5e-09 66.2 105 33.3
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 1.9e-08 64.7 395 25.1
BcaC02g09794 Brassica carinata HOM05D010965 ORTHO05D024278 3.2e-08 63.9 104 36.5
C04p36520 Brassica napus HOM05D010965 ORTHO05D024278 3.2e-08 63.9 104 36.5
BolC4t25144H Brassica oleracea HOM05D010965 ORTHO05D024278 3.2e-08 63.9 104 36.5
BraA09t40689Z Brassica rapa HOM05D001456 ORTHO05D011781 3.2e-08 63.9 101 32.7
A09p52590 Brassica napus HOM05D001456 ORTHO05D011781 4.2e-08 63.5 101 32.7
C08p35340 Brassica napus HOM05D001456 ORTHO05D011781 4.2e-08 63.5 101 32.7
BolC8t51127H Brassica oleracea HOM05D001456 ORTHO05D011781 4.2e-08 63.5 101 32.7
BraA10t45076Z Brassica rapa HOM05D001260 ORTHO05D002424 5.5e-08 63.2 164 28.7
Carub.0001s3469 Capsella rubella HOM05D001456 ORTHO05D010099 5.5e-08 63.2 138 29.0
AL5G41570 Arabidopsis lyrata HOM05D001456 ORTHO05D011865 7.2e-08 62.8 133 35.3
AL1G58420 Arabidopsis lyrata HOM05D001456 ORTHO05D010099 9.5e-08 62.4 137 29.9
Thhalv10006264m.g Eutrema salsugineum HOM05D001456 ORTHO05D011781 9.5e-08 62.4 99 36.4
CARHR167770 Cardamine hirsuta HOM05D001456 ORTHO05D011781 2.1e-07 61.2 157 29.9
AL7G51710 Arabidopsis lyrata HOM05D001456 ORTHO05D012451 3.6e-07 60.5 155 31.0
A04p04180 Brassica napus HOM05D010965 ORTHO05D024278 1.0e-06 58.9 100 36.0
BraA04t16134Z Brassica rapa HOM05D010965 ORTHO05D024278 1.0e-06 58.9 100 36.0
Carub.0007s1746 Capsella rubella HOM05D001456 ORTHO05D011865 1.0e-06 58.9 139 30.9
BcaC03g18124 Brassica carinata HOM05D012599 ORTHO05D014967 1.4e-06 58.5 145 29.0
C02p01630 Brassica napus HOM05D007309 ORTHO05D010099 1.4e-06 58.5 147 28.6
Carub.0001s2894 Capsella rubella HOM05D025627 ORTHO05D012451 1.8e-06 58.2 129 29.5
AT3G61090 Arabidopsis thaliana HOM05D001456 ORTHO05D011781 6.8e-06 56.2 129 31.0


User provided reference genes

Program Settings