Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 1.8e-113 412.5 195 100.0
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 2.5e-99 365.5 195 89.2
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 1.3e-92 343.2 195 83.1
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 1.0e-84 317.0 195 76.9
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 9.4e-83 310.5 196 76.5
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 9.4e-83 310.5 196 76.5
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 8.8e-81 303.9 201 75.6
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 1.3e-79 300.1 197 74.1
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 1.4e-78 296.6 196 74.0
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 3.1e-78 295.4 196 74.0
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 1.0e-76 290.4 201 71.6
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 3.5e-69 265.4 196 68.4
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 8.3e-63 244.2 209 61.7
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 1.3e-55 220.3 197 56.3
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 6.6e-36 154.8 201 45.8
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.5e-35 153.7 201 45.3
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 1.9e-35 153.3 201 45.3
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 6.2e-34 148.3 194 42.3
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 8.1e-34 147.9 203 44.8
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 1.1e-33 147.5 188 46.8
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 1.1e-33 147.5 188 46.8
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 4.0e-33 145.6 204 45.6
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 4.0e-33 145.6 199 43.7
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 9.0e-33 144.4 194 42.3
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 1.2e-32 144.1 200 45.0
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 1.5e-32 143.7 194 44.8
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 1.3e-31 140.6 196 42.9
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 2.9e-31 139.4 195 42.6
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 4.9e-31 138.7 162 47.5
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 2.4e-30 136.3 207 42.0
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 4.2e-30 135.6 185 42.7
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 1.6e-29 133.7 197 43.1
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 2.1e-29 133.3 185 41.6
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 4.6e-29 132.1 185 41.6
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 1.0e-28 131.0 194 42.3
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 1.7e-28 130.2 195 39.5
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 1.7e-28 130.2 193 42.5
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 2.3e-28 129.8 197 40.1
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 3.0e-28 129.4 196 40.3
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 5.1e-28 128.6 193 40.9
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 5.1e-28 128.6 194 38.7
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 8.7e-28 127.9 193 38.9
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 1.5e-27 127.1 189 39.2
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 1.9e-27 126.7 199 42.2
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 3.3e-27 125.9 201 40.8
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 4.3e-27 125.6 203 39.4
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 5.6e-27 125.2 194 42.3
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 9.6e-27 124.4 201 40.3
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 9.6e-27 124.4 196 40.3
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 2.1e-26 123.2 197 42.1
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 4.8e-26 122.1 214 36.9
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 4.8e-26 122.1 194 39.7
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 1.1e-25 120.9 197 39.6
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 1.4e-25 120.6 204 36.8
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 4.0e-25 119.0 190 38.9
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 5.3e-25 118.6 197 39.1
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 5.3e-25 118.6 173 43.9
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 6.9e-25 118.2 207 39.6
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 6.9e-25 118.2 190 39.5
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 1.2e-24 117.5 193 37.8
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.5e-24 117.1 199 38.2
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 1.5e-24 117.1 196 40.8
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 2.0e-24 116.7 201 38.3
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 3.4e-24 115.9 196 39.8
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 4.5e-24 115.5 200 39.0
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 5.8e-24 115.2 196 41.3
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 2.9e-23 112.8 192 42.2
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 2.9e-23 112.8 192 42.2
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 6.4e-23 111.7 200 38.5
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 1.4e-22 110.5 191 40.3
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 1.4e-22 110.5 185 38.4
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 2.4e-22 109.8 186 36.6
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 2.4e-22 109.8 200 37.0
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 2.4e-22 109.8 190 36.3
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 4.2e-22 109.0 189 39.2
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 7.1e-22 108.2 192 39.6
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 9.3e-22 107.8 188 38.8
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 1.6e-21 107.1 198 36.9
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 2.1e-21 106.7 109 52.3
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 4.6e-21 105.5 185 40.5
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 6.0e-21 105.1 178 38.8
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 7.9e-21 104.8 178 34.8
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 7.9e-21 104.8 206 35.0
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 1.0e-20 104.4 196 36.7
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 1.8e-20 103.6 204 31.4
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 3.0e-20 102.8 195 34.4
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 3.0e-20 102.8 203 36.0
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 6.7e-20 101.7 204 35.3
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 8.7e-20 101.3 194 38.1
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 8.7e-20 101.3 199 35.2
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 8.7e-20 101.3 191 36.1
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 1.1e-19 100.9 190 38.9
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 1.5e-19 100.5 194 35.1
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 2.5e-19 99.8 107 46.7
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 5.6e-19 98.6 209 34.4
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 9.6e-19 97.8 192 35.4
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 1.6e-18 97.1 174 35.6
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 1.6e-18 97.1 199 35.7
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 3.7e-18 95.9 193 36.3
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 4.8e-18 95.5 194 38.7
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 6.2e-18 95.1 206 35.0
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 1.4e-17 94.0 159 37.7
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 9.0e-17 91.3 202 32.2
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 9.0e-17 91.3 182 34.1
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 1.7e-15 87.0 157 37.6
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 8.4e-15 84.7 195 32.3
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 7.1e-14 81.6 190 31.1
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 1.6e-13 80.5 191 29.8
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 1.0e-12 77.8 92 44.6
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 1.0e-12 77.8 92 44.6
BolC8t47476H Brassica oleracea HOM05D006157 ORTHO05D007826 1.8e-12 77.0 69 59.4
C08p06300 Brassica napus HOM05D006157 ORTHO05D007826 3.9e-12 75.9 69 58.0
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 4.3e-11 72.4 167 31.7
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 4.3e-11 72.4 162 32.7
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 5.3e-09 65.5 146 30.1
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 6.9e-09 65.1 169 28.4
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.0e-07 61.2 159 33.3
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 3.8e-07 59.3 188 31.4
BolC6t35322H Brassica oleracea HOM05D006157 ORTHO05D007826 2.5e-06 56.6 34 70.6
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 3.2e-06 56.2 38 50.0
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 3.2e-06 56.2 43 55.8
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 9.3e-06 54.7 41 48.8


User provided reference genes

Program Settings