Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G53070 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 3.2e-122 441.8 231 100.0
AT1G55928 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 6.1e-73 278.1 218 71.6
AL4G21200 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 6.8e-72 274.6 203 71.4
Aa31LG5G8680 Aethionema arabicum HOM05D002737 ORTHO05D005828 1.2e-71 273.9 203 71.4
AL4G21190 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 3.7e-70 268.9 201 71.6
Sp4g10090 Schrenkiella parvula HOM05D002737 ORTHO05D005828 1.4e-69 266.9 204 68.6
Carub.0004s0789 Capsella rubella HOM05D002737 ORTHO05D005828 2.4e-69 266.2 204 70.1
AT2G27285 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 5.4e-69 265.0 202 68.8
CARHR119810 Cardamine hirsuta HOM05D002737 ORTHO05D005828 5.4e-69 265.0 203 70.0
Carub.0004s0788 Capsella rubella HOM05D002737 ORTHO05D005828 7.3e-66 254.6 222 64.9
Thhalv10002052m.g Eutrema salsugineum HOM05D002737 ORTHO05D005828 1.4e-64 250.4 198 66.7
THA.LOC104826443 Tarenaya hassleriana HOM05D002737 ORTHO05D005828 1.4e-64 250.4 208 63.9
AT2G27280 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 3.1e-64 249.2 202 67.3
BcaB06g28137 Brassica carinata HOM05D002737 ORTHO05D005828 9.2e-61 237.7 221 59.3
BcaC02g08257 Brassica carinata HOM05D002737 ORTHO05D005828 3.4e-55 219.2 192 62.0
C04p56640 Brassica napus HOM05D002737 ORTHO05D005828 3.4e-55 219.2 192 62.0
A04p20820 Brassica napus HOM05D002737 ORTHO05D005828 9.2e-53 211.1 203 58.6
BraA04t17655Z Brassica rapa HOM05D002737 ORTHO05D005828 9.2e-53 211.1 203 58.6
Prupe.6G178500 Prunus persica HOM05D002737 ORTHO05D005828 3.5e-52 209.1 204 55.9
vmacro03959 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 4.6e-52 208.8 208 56.7
ClCG01G011660 Citrullus lanatus HOM05D002737 ORTHO05D005828 7.8e-52 208.0 208 55.3
Duzib150G0779 Durio zibethinus HOM05D002737 ORTHO05D005828 7.8e-52 208.0 219 53.9
PGSC0003DMG400019621 Solanum tuberosum HOM05D002737 ORTHO05D005828 1.3e-51 207.2 187 58.8
BolC4t27191H Brassica oleracea HOM05D002737 ORTHO05D005828 3.9e-51 205.7 202 58.9
Dinv17085 Davidia involucrata HOM05D002737 ORTHO05D005828 5.1e-51 205.3 217 53.0
Sed0023461 Sechium edule HOM05D002737 ORTHO05D005828 5.1e-51 205.3 207 53.6
CDE06G1256 Ceratophyllum demersum HOM05D002737 ORTHO05D005828 6.6e-51 204.9 217 53.5
RcHm_v2.0_Chr2g0115601 Rosa chinensis HOM05D002737 ORTHO05D005828 8.6e-51 204.5 195 55.9
CDE08G0429 Ceratophyllum demersum HOM05D002737 ORTHO05D003752 1.1e-50 204.1 188 57.4
vmacro06935 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 1.1e-50 204.1 209 54.1
Manes.01G182101 Manihot esculenta HOM05D002737 ORTHO05D005828 1.5e-50 203.8 209 54.1
CAN.G745.41 Capsicum annuum HOM05D002737 ORTHO05D005828 1.9e-50 203.4 206 52.9
Solyc11g068870.2 Solanum lycopersicum HOM05D002737 ORTHO05D005828 1.9e-50 203.4 187 57.8
Sopen11g027560 Solanum pennellii HOM05D002737 ORTHO05D005828 1.9e-50 203.4 187 57.8
CsaV3_2G009130 Cucumis sativus L. HOM05D002737 ORTHO05D005828 2.5e-50 203.0 206 54.9
CSS0011545 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 3.3e-50 202.6 204 53.9
Nitab4.5_0001135g0150 Nicotiana tabacum HOM05D002737 ORTHO05D005828 3.3e-50 202.6 211 55.5
Actinidia07271 Actinidia chinensis HOM05D002737 ORTHO05D005828 4.3e-50 202.2 217 51.6
Rhsim13G0195300 Rhododendron simsii HOM05D002737 ORTHO05D005828 4.3e-50 202.2 203 55.7
Nitab4.5_0000893g0040 Nicotiana tabacum HOM05D002737 ORTHO05D005828 5.6e-50 201.8 209 54.1
MELO3C003924.2 Cucumis melo HOM05D002737 ORTHO05D005828 1.6e-49 200.3 206 54.9
FAN19G0045 Fragaria x ananassa HOM05D002737 ORTHO05D005828 1.6e-49 200.3 197 54.8
Thecc.09G275600 Theobroma cacao HOM05D002737 ORTHO05D005828 1.6e-49 200.3 216 52.3
CiPaw.14G096400 Carya illinoinensis HOM05D002737 ORTHO05D005828 2.8e-49 199.5 191 55.5
Sabra15G0046000 Salix brachista HOM05D002737 ORTHO05D005828 2.8e-49 199.5 217 51.2
Sabra15G0048200 Salix brachista HOM05D002737 ORTHO05D005828 2.8e-49 199.5 217 51.2
EL10Ac7g17115 Beta vulgaris HOM05D002737 ORTHO05D005828 3.6e-49 199.1 218 50.5
TWI77G0520 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 3.6e-49 199.1 209 53.1
FvH4_1g21730 Fragaria vesca HOM05D002737 ORTHO05D005828 6.2e-49 198.4 197 54.3
FAN23G1354 Fragaria x ananassa HOM05D002737 ORTHO05D005828 8.1e-49 198.0 222 50.9
Sc12g0004790 Simmondsia chinensis HOM05D002737 ORTHO05D005828 8.1e-49 198.0 223 53.4
TWI79G0303 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 8.1e-49 198.0 211 52.6
Duzib168G0210 Durio zibethinus HOM05D002737 ORTHO05D005828 1.1e-48 197.6 224 50.4
SGA_v2.0_scaffold7G03980 Striga asiatica HOM05D002737 ORTHO05D005828 1.1e-48 197.6 202 54.0
MSTRG.21020 Avicennia marina HOM05D002737 ORTHO05D005828 1.8e-48 196.8 201 52.7
CSS0011939 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 1.8e-48 196.8 204 53.4
CANSAT64G0180 Cannabis sativa HOM05D002737 ORTHO05D005828 1.8e-48 196.8 211 55.0
SGA_v2.0_scaffold114G31961 Striga asiatica HOM05D002737 ORTHO05D005828 2.4e-48 196.4 208 52.9
GSVIVG01036054001 Vitis vinifera HOM05D002737 ORTHO05D005828 5.2e-48 195.3 217 50.7
FAN26G0444 Fragaria x ananassa HOM05D002737 ORTHO05D005828 8.9e-48 194.5 197 53.8
Gohir.A07G112300 Gossypium hirsutum HOM05D002737 ORTHO05D005828 8.9e-48 194.5 172 59.3
Sabra15G0059900 Salix brachista HOM05D002737 ORTHO05D005828 2.0e-47 193.4 224 49.6
Hund18792 Selenicereus undatus HOM05D002737 ORTHO05D005828 2.0e-47 193.4 191 53.4
Migut.D02412 Erythranthe guttata HOM05D002737 ORTHO05D005828 3.4e-47 192.6 228 49.6
ECA248G3131 Erigeron canadensis HOM05D002737 ORTHO05D005828 5.8e-47 191.8 205 52.2
PSO063G0569 Papaver somniferum HOM05D002737 ORTHO05D005828 5.8e-47 191.8 200 52.5
Haze_00729 Corylus avellana HOM05D002737 ORTHO05D005828 1.3e-46 190.7 198 53.5
Cc01_g08470 Coffea canephora HOM05D002737 ORTHO05D005828 1.7e-46 190.3 207 52.2
Gohir.D07G115800 Gossypium hirsutum HOM05D002737 ORTHO05D005828 1.7e-46 190.3 208 51.9
Lj7A589T65 Lonicera japonica HOM05D002737 ORTHO05D005828 1.7e-46 190.3 203 51.7
Lsat_1_v5_gn_5_176321 Lactuca sativa HOM05D002737 ORTHO05D005828 2.2e-46 189.9 223 49.8
Haze_00725 Corylus avellana HOM05D002737 ORTHO05D005828 2.9e-46 189.5 198 52.0
QL07p000712 Quercus lobata HOM05D002737 ORTHO05D005828 3.8e-46 189.1 183 55.7
Potri.009G162500 Populus trichocarpa HOM05D002737 ORTHO05D005828 4.9e-46 188.7 204 50.5
unitig_88.g27805 Utricularia gibba HOM05D002737 ORTHO05D002121 4.9e-46 188.7 217 51.6
DCAR_003399 Daucus carota HOM05D002737 ORTHO05D005828 1.4e-45 187.2 224 46.4
Peaxi162Scf01324g00241 Petunia axillaris HOM05D002737 ORTHO05D005828 1.4e-45 187.2 213 51.2
Gorai.001G124100 Gossypium raimondii HOM05D002737 ORTHO05D005828 5.4e-45 185.3 209 51.7
MD15G1329700 Malus domestica HOM05D002737 ORTHO05D005828 5.4e-45 185.3 216 48.1
Haze_23327 Corylus avellana HOM05D002737 ORTHO05D005828 1.2e-44 184.1 171 55.0
arahy.Tifrunner.gnm1.ann1.4SNC56 Arachis hypogaea HOM05D002737 ORTHO05D005828 4.6e-44 182.2 215 50.7
Aqoxy4G02622 Aquilegia oxysepala HOM05D002737 ORTHO05D005828 1.3e-43 180.6 206 50.5
Oeu049293.2 Olea europaea HOM05D002737 ORTHO05D005828 1.3e-43 180.6 235 45.1
Ah.10g032410 Amaranthus hybridus HOM05D002737 ORTHO05D005828 1.7e-43 180.3 256 44.5
Glyma.10G288000 Glycine max HOM05D002737 ORTHO05D005828 1.7e-43 180.3 202 51.5
Glyma.20G101200 Glycine max HOM05D002737 ORTHO05D005828 1.7e-43 180.3 194 52.6
Lj5g0022679 Lotus japonicus HOM05D002737 ORTHO05D005828 1.7e-43 180.3 202 51.0
Lalb_Chr02g0143691 Lupinus albus HOM05D002737 ORTHO05D005828 2.3e-43 179.9 201 50.7
arahy.Tifrunner.gnm1.ann1.AGV1MP Arachis hypogaea HOM05D002737 ORTHO05D005828 3.9e-43 179.1 215 50.2
Hma1.2p1_0793F.1_g218640 Hydrangea macrophylla HOM05D002737 ORTHO05D005828 3.9e-43 179.1 203 47.3
Nn6g34744 Nelumbo nucifera HOM05D002737 ORTHO05D005828 3.9e-43 179.1 222 48.2
PGR119G1771 Punica granatum HOM05D002737 ORTHO05D005828 3.9e-43 179.1 213 47.9
VMungo0720G0453 Vigna mungo HOM05D002737 ORTHO05D005828 6.6e-43 178.3 193 53.4
Ca_06383_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 8.7e-43 177.9 202 50.5
Ca_29964_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 8.7e-43 177.9 202 50.5
Eucgr.J00541 Eucalyptus grandis HOM05D002737 ORTHO05D005828 1.9e-42 176.8 166 56.0
Medtr5g095010 Medicago truncatula HOM05D002737 ORTHO05D005828 3.3e-42 176.0 204 50.5
CARHR119800 Cardamine hirsuta HOM05D002737 ORTHO05D005828 1.2e-41 174.1 181 58.0
COL.COLO4_22657 Corchorus olitorius HOM05D002737 ORTHO05D005828 1.6e-41 173.7 187 51.3
Psat2g008640 Pisum sativum HOM05D002737 ORTHO05D005828 2.1e-41 173.3 215 50.7
MBI01_g04520_MAGBIO Magnolia biondii HOM05D002737 ORTHO05D005828 2.8e-41 172.9 194 50.5
Peaxi162Scf00010g03312 Petunia axillaris HOM05D002737 ORTHO05D005828 8.1e-41 171.4 149 58.4
Peaxi162Scf01010g00216 Petunia axillaris HOM05D002737 ORTHO05D005828 1.1e-40 171.0 149 57.7
ATR0807G231 Amborella trichopoda HOM05D002737 ORTHO05D005828 3.1e-40 169.5 224 46.4
HPP92_021234 Vanilla planifolia HOM05D002737 ORTHO05D005828 4.0e-40 169.1 167 54.5
Lj5g0011855 Lotus japonicus HOM05D002737 ORTHO05D005828 9.0e-40 167.9 202 49.0
TAR268G0004 Trochodendron aralioides HOM05D002737 ORTHO05D005828 2.0e-39 166.8 218 46.3
TPR.G14160 Trifolium pratense HOM05D002737 ORTHO05D005828 4.4e-39 165.6 205 50.7
Peaxi162Scf00010g03410 Petunia axillaris HOM05D002737 ORTHO05D005828 2.2e-38 163.3 150 54.7
Ciclev10028821m.g Citrus clementina HOM05D002737 ORTHO05D005828 8.4e-38 161.4 212 43.9
Sabra09G0126900 Salix brachista HOM05D002737 ORTHO05D005828 1.2e-36 157.5 168 49.4
Phvul.007G013400 Phaseolus vulgaris HOM05D002737 ORTHO05D005828 2.7e-36 156.4 172 51.7
Atru.chr3.3139 Acer truncatum HOM05D002737 ORTHO05D005828 2.3e-35 153.3 181 48.1
Pp3c10_11700 Physcomitrium patens HOM05D002737 ORTHO05D005828 1.9e-34 150.2 193 45.6
Sabra15G0053400 Salix brachista HOM05D002737 ORTHO05D005828 7.3e-34 148.3 217 44.2
AagrBONN_evm.TU.Sc2ySwM_368.3225 Anthoceros agrestis HOM05D002737 ORTHO05D005828 1.3e-33 147.5 190 44.7
Sabra15G0053700 Salix brachista HOM05D002737 ORTHO05D005828 1.3e-33 147.5 217 44.2
SEGI_17121 Sequoiadendron giganteum HOM05D002737 ORTHO05D005828 2.1e-33 146.7 171 49.7
Zm00001eb422940 Zea mays HOM05D002737 ORTHO05D005828 4.8e-33 145.6 130 54.6
CBR_g45752 Chara braunii HOM05D002737 ORTHO05D005828 9.0e-32 141.4 208 41.8
Mapoly0024s0122 Marchantia polymorpha HOM05D002737 ORTHO05D005828 1.7e-30 137.1 221 40.7
CBR_g6328 Chara braunii HOM05D002737 ORTHO05D005828 3.8e-30 136.0 197 42.1
Os04g0440000 Oryza sativa ssp. japonica HOM05D002737 ORTHO05D005828 1.6e-28 130.6 149 47.0
CiPaw.13G131400 Carya illinoinensis HOM05D002737 ORTHO05D005828 2.1e-28 130.2 148 48.6
QL07p000775 Quercus lobata HOM05D002737 ORTHO05D005828 3.9e-27 125.9 176 43.2
HanXRQChr03g0065531 Helianthus annuus HOM05D002737 ORTHO05D005828 8.7e-27 124.8 140 50.7
Cre17.g734000 Chlamydomonas reinhardtii HOM05D002737 ORTHO05D005828 5.6e-26 122.1 191 36.6
AUR62018224 Chenopodium quinoa HOM05D002737 ORTHO05D005828 2.1e-25 120.2 100 60.0
QL07p000693 Quercus lobata HOM05D002737 ORTHO05D009499 2.1e-25 120.2 163 45.4
AUR62037790 Chenopodium quinoa HOM05D002737 ORTHO05D005828 4.8e-25 119.0 114 55.3
MCO06G117 Micromonas commoda HOM05D002737 ORTHO05D005828 2.2e-22 110.2 237 34.2
Potri.004G201300 Populus trichocarpa HOM05D002737 ORTHO05D005828 2.7e-20 103.2 168 42.9
Actinidia24241 Actinidia chinensis HOM05D002737 ORTHO05D005828 8.7e-19 98.2 96 52.1
Migut.D02413 Erythranthe guttata HOM05D002737 ORTHO05D005828 4.3e-18 95.9 107 52.3
FAN28G1974 Fragaria x ananassa HOM05D002737 ORTHO05D005828 1.3e-17 94.4 102 51.0
Actinidia24240 Actinidia chinensis HOM05D002737 ORTHO05D005828 3.7e-17 92.8 97 54.6
Lalb_Chr06g0164021 Lupinus albus HOM05D002737 ORTHO05D005828 6.2e-17 92.0 102 51.0
Gohir.D05G081600 Gossypium hirsutum HOM05D002737 ORTHO05D005828 1.5e-15 87.4 178 38.2
CSS0037550 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 1.7e-14 84.0 93 49.5
MD01G1023000 Malus domestica HOM05D002737 ORTHO05D005828 6.5e-14 82.0 100 48.0
Migut.D02400 Erythranthe guttata HOM05D002737 ORTHO05D005828 1.0e-11 74.7 226 29.6
SHI06201 Sapria himalayana HOM05D002737 ORTHO05D005828 1.5e-10 70.9 110 38.2
arahy.Tifrunner.gnm1.ann1.G9FM3T Arachis hypogaea HOM05D002737 ORTHO05D005828 2.5e-10 70.1 90 41.1
AagrBONN_evm.TU.Sc2ySwM_368.3239 Anthoceros agrestis HOM05D002737 ORTHO05D005828 7.4e-10 68.6 71 50.7
QL07p000753 Quercus lobata HOM05D002737 ORTHO05D005828 3.1e-08 63.2 56 57.1
Oeu025863.1 Olea europaea HOM05D002737 ORTHO05D005828 4.1e-08 62.8 148 35.8
Cpa.g.sc23.121 Carica papaya HOM05D002737 ORTHO05D005828 5.0e-06 55.8 40 65.0


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