Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G51810 Arabidopsis lyrata HOM05D004716 ORTHO05D005646 0.0e+00 1198.3 601 100.0
AT1G43690 Arabidopsis thaliana HOM05D004716 ORTHO05D005646 0.0e+00 1129.8 603 94.2
Carub.0001s3471 Capsella rubella HOM05D004716 ORTHO05D005646 4.1e-312 1073.9 606 89.6
Thhalv10011324m.g Eutrema salsugineum HOM05D004716 ORTHO05D005646 3.8e-300 1034.2 613 86.8
Sp1g32700 Schrenkiella parvula HOM05D004716 ORTHO05D005646 3.0e-297 1024.6 618 86.6
BcaB07g33979 Brassica carinata HOM05D004716 ORTHO05D005646 6.3e-287 990.3 606 84.0
A10p07790 Brassica napus HOM05D004716 ORTHO05D005646 1.4e-286 989.2 602 84.1
BraSC36t46025Z Brassica rapa HOM05D004716 ORTHO05D005646 4.1e-286 987.6 602 83.9
BcaC08g42816 Brassica carinata HOM05D004716 ORTHO05D005646 8.5e-284 979.9 602 82.9
C06p00280 Brassica napus HOM05D004716 ORTHO05D005646 8.5e-284 979.9 602 82.9
CARHR035580 Cardamine hirsuta HOM05D004716 ORTHO05D005646 1.1e-278 963.0 607 82.4
Aa31LG6G9740 Aethionema arabicum HOM05D004716 ORTHO05D005646 1.0e-268 929.9 620 79.2
THA.LOC104809692 Tarenaya hassleriana HOM05D004716 ORTHO05D005646 1.5e-232 809.7 613 69.3
Manes.18G091200 Manihot esculenta HOM05D004716 ORTHO05D005646 2.5e-227 792.3 622 67.4
CANSAT25G0539 Cannabis sativa HOM05D004716 ORTHO05D005646 4.3e-227 791.6 634 65.8
TWI34G0952 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 2.1e-226 789.3 615 66.7
Haze_17746 Corylus avellana HOM05D004716 ORTHO05D005646 6.9e-225 784.3 619 65.9
arahy.Tifrunner.gnm1.ann1.LT68UB Arachis hypogaea HOM05D004716 ORTHO05D005646 9.0e-225 783.9 636 65.7
arahy.Tifrunner.gnm1.ann1.RZZD7S Arachis hypogaea HOM05D004716 ORTHO05D005646 9.0e-225 783.9 636 65.7
Cfa018329 Carpinus fangiana HOM05D004716 ORTHO05D005646 9.0e-225 783.9 619 65.9
Potri.005G191300 Populus trichocarpa HOM05D004716 ORTHO05D005646 7.6e-224 780.8 625 66.9
ClCG09G009620 Citrullus lanatus HOM05D004716 ORTHO05D005646 2.9e-223 778.9 620 66.9
CiPaw.15G016900 Carya illinoinensis HOM05D004716 ORTHO05D005646 6.4e-223 777.7 619 64.9
Duzib116G0661 Durio zibethinus HOM05D004716 ORTHO05D005646 2.4e-222 775.8 622 65.9
Potri.002G069100 Populus trichocarpa HOM05D004716 ORTHO05D005646 3.2e-222 775.4 639 65.4
Atru.chr13.2155 Acer truncatum HOM05D004716 ORTHO05D005646 7.1e-222 774.2 636 64.3
MD05G1023700 Malus domestica HOM05D004716 ORTHO05D005646 7.1e-222 774.2 629 64.2
Glyma.10G225500 Glycine max HOM05D004716 ORTHO05D005646 9.3e-222 773.9 622 65.8
MELO3C023718.2 Cucumis melo HOM05D004716 ORTHO05D005646 3.5e-221 771.9 621 66.2
TWI60G0041 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 4.6e-221 771.5 614 66.1
GSVIVG01034512001 Vitis vinifera HOM05D004716 ORTHO05D005646 7.9e-221 770.8 626 66.3
CsaV3_7G025180 Cucumis sativus L. HOM05D004716 ORTHO05D005646 1.0e-220 770.4 618 66.5
CiPaw.16G013500 Carya illinoinensis HOM05D004716 ORTHO05D005646 1.3e-220 770.0 620 65.3
Prupe.8G028200 Prunus persica HOM05D004716 ORTHO05D005646 3.0e-220 768.8 627 64.8
Duzib041G0148 Durio zibethinus HOM05D004716 ORTHO05D005646 5.1e-220 768.1 625 65.0
Thecc.08G149900 Theobroma cacao HOM05D004716 ORTHO05D005646 6.7e-220 767.7 619 64.6
Ca_19935_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 9.6e-219 763.8 621 65.1
Glyma.20G166300 Glycine max HOM05D004716 ORTHO05D005646 9.6e-219 763.8 621 65.1
Sabra05G0146100 Salix brachista HOM05D004716 ORTHO05D005646 3.6e-218 761.9 628 65.1
COL.COLO4_37837 Corchorus olitorius HOM05D004716 ORTHO05D005646 6.2e-218 761.1 621 64.9
TAR381G1500 Trochodendron aralioides HOM05D004716 ORTHO05D005646 1.1e-217 760.4 649 62.6
FAN27G2333 Fragaria x ananassa HOM05D004716 ORTHO05D005646 1.8e-217 759.6 618 63.8
Sabra02G0054300 Salix brachista HOM05D004716 ORTHO05D005646 2.4e-217 759.2 639 64.0
Phvul.007G079400 Phaseolus vulgaris HOM05D004716 ORTHO05D005646 5.3e-217 758.1 621 64.6
Sed0005850 Sechium edule HOM05D004716 ORTHO05D005646 6.9e-217 757.7 619 65.3
FAN15G2444 Fragaria x ananassa HOM05D004716 ORTHO05D005646 9.0e-217 757.3 612 63.9
FvH4_2g13910 Fragaria vesca HOM05D004716 ORTHO05D005646 1.2e-216 756.9 615 63.9
Actinidia17798 Actinidia chinensis HOM05D004716 ORTHO05D005646 3.4e-216 755.4 623 64.2
FAN24G2048 Fragaria x ananassa HOM05D004716 ORTHO05D005646 3.8e-215 751.9 615 63.7
RcHm_v2.0_Chr6g0275661 Rosa chinensis HOM05D004716 ORTHO05D005646 4.9e-215 751.5 627 64.0
Dinv41092 Davidia involucrata HOM05D004716 ORTHO05D005646 8.4e-215 750.7 636 64.2
FAN20G2258 Fragaria x ananassa HOM05D004716 ORTHO05D005646 8.4e-215 750.7 616 63.5
MD10G1024300 Malus domestica HOM05D004716 ORTHO05D005646 4.2e-214 748.4 629 63.0
Gorai.009G253500 Gossypium raimondii HOM05D004716 ORTHO05D005646 5.5e-214 748.0 619 64.0
Nitab4.5_0008759g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 5.5e-214 748.0 638 61.9
Nn5g28715 Nelumbo nucifera HOM05D004716 ORTHO05D005646 1.2e-213 746.9 640 62.2
Lalb_Chr01g0009631 Lupinus albus HOM05D004716 ORTHO05D005646 1.6e-213 746.5 638 62.4
Sed0016522 Sechium edule HOM05D004716 ORTHO05D005646 1.6e-213 746.5 619 64.1
Duzib093G0980 Durio zibethinus HOM05D004716 ORTHO05D005646 3.5e-213 745.3 620 64.0
Lj5g0004042 Lotus japonicus HOM05D004716 ORTHO05D005646 3.5e-213 745.3 623 63.9
Oeu046025.1 Olea europaea HOM05D004716 ORTHO05D005646 1.0e-212 743.8 625 62.6
Nitab4.5_0000032g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 2.3e-212 742.7 633 61.8
Cc10_g14730 Coffea canephora HOM05D004716 ORTHO05D005646 3.9e-212 741.9 635 62.0
Gohir.A05G242900 Gossypium hirsutum HOM05D004716 ORTHO05D005646 5.1e-212 741.5 619 63.5
Dinv25852 Davidia involucrata HOM05D004716 ORTHO05D005646 6.7e-212 741.1 636 62.6
Hma1.2p1_0105F.1_g050810 Hydrangea macrophylla HOM05D004716 ORTHO05D005646 6.7e-212 741.1 657 60.3
HanXRQChr10g0279061 Helianthus annuus HOM05D004716 ORTHO05D005646 8.7e-212 740.7 637 63.1
Gorai.009G285100 Gossypium raimondii HOM05D004716 ORTHO05D005646 2.5e-211 739.2 626 64.1
Aqoxy5G02106 Aquilegia oxysepala HOM05D004716 ORTHO05D005646 9.6e-211 737.3 637 61.9
Gohir.A05G270100 Gossypium hirsutum HOM05D004716 ORTHO05D005646 1.3e-210 736.9 622 64.1
MBI09_g32373_MAGBIO Magnolia biondii HOM05D004716 ORTHO05D005646 2.1e-210 736.1 623 62.6
TAR625G0458 Trochodendron aralioides HOM05D004716 ORTHO05D005646 1.3e-207 726.9 644 59.8
Rhsim06G0090400 Rhododendron simsii HOM05D004716 ORTHO05D005646 1.7e-207 726.5 626 61.7
Eucgr.F04241 Eucalyptus grandis HOM05D004716 ORTHO05D005646 6.5e-207 724.5 653 59.9
TPR.G30003 Trifolium pratense HOM05D004716 ORTHO05D005646 3.2e-206 722.2 625 62.6
Sopen04g027280 Solanum pennellii HOM05D004716 ORTHO05D005646 5.5e-206 721.5 649 58.7
AUR62013572 Chenopodium quinoa HOM05D004716 ORTHO05D005646 7.9e-205 717.6 637 60.4
EL10Ac1g01533 Beta vulgaris HOM05D004716 ORTHO05D005646 3.0e-204 715.7 634 61.0
Ciclev10000573m.g Citrus clementina HOM05D004716 ORTHO05D005646 6.7e-204 714.5 652 60.3
PSO210G2251 Papaver somniferum HOM05D004716 ORTHO05D005646 1.9e-203 713.0 654 59.9
PGR044G2101 Punica granatum HOM05D004716 ORTHO05D005646 2.5e-203 712.6 620 60.6
CAN.G268.7 Capsicum annuum HOM05D004716 ORTHO05D005646 3.3e-203 712.2 642 59.0
ECA246G4589 Erigeron canadensis HOM05D004716 ORTHO05D005646 4.3e-203 711.8 624 61.5
Lsat_1_v5_gn_6_99641 Lactuca sativa HOM05D004716 ORTHO05D005646 4.3e-203 711.8 622 60.9
MSTRG.22371 Avicennia marina HOM05D004716 ORTHO05D005646 2.1e-202 709.5 655 58.9
Migut.N03224 Erythranthe guttata HOM05D004716 ORTHO05D005646 2.8e-202 709.1 650 59.8
Ah.05g167860 Amaranthus hybridus HOM05D004716 ORTHO05D005646 6.3e-202 708.0 615 61.0
Peaxi162Scf00765g00315 Petunia axillaris HOM05D004716 ORTHO05D005646 6.3e-202 708.0 629 60.1
Medtr1g098940 Medicago truncatula HOM05D004716 ORTHO05D005646 1.1e-201 707.2 628 60.8
DCAR_001131 Daucus carota HOM05D004716 ORTHO05D005646 5.3e-201 704.9 623 61.3
Gohir.D05G272200 Gossypium hirsutum HOM05D004716 ORTHO05D005646 1.7e-199 699.9 626 62.0
QL02p024060 Quercus lobata HOM05D004716 ORTHO05D005646 1.7e-199 699.9 764 52.9
Gohir.D05G244400 Gossypium hirsutum HOM05D004716 ORTHO05D005646 3.2e-198 695.7 613 61.0
Lalb_Chr06g0161551 Lupinus albus HOM05D004716 ORTHO05D005646 1.2e-197 693.7 613 61.2
AUR62026717 Chenopodium quinoa HOM05D004716 ORTHO05D005646 1.6e-197 693.3 619 59.8
Sed0004003 Sechium edule HOM05D004716 ORTHO05D005646 7.9e-197 691.0 509 69.0
Solyc04g071320.4 Solanum lycopersicum HOM05D004716 ORTHO05D005646 3.3e-195 685.6 648 57.1
SalBow7G0781 Salvia bowleyana HOM05D004716 ORTHO05D005646 8.2e-194 681.0 618 59.4
TPR.G36694 Trifolium pratense HOM05D004716 ORTHO05D005646 1.4e-193 680.2 578 61.8
PSO238G0051 Papaver somniferum HOM05D004716 ORTHO05D005646 2.4e-193 679.5 657 56.8
SGA_v2.0_scaffold25G11175 Striga asiatica HOM05D004716 ORTHO05D005646 6.9e-193 677.9 650 58.0
unitig_62.g23528 Utricularia gibba HOM05D004716 ORTHO05D005646 5.9e-192 674.9 623 58.3
Lj7A371T50 Lonicera japonica HOM05D004716 ORTHO05D005646 1.2e-189 667.2 562 62.3
Zm00001eb422340 Zea mays HOM05D004716 ORTHO05D005646 4.8e-186 655.2 630 56.8
Nn1g06102 Nelumbo nucifera HOM05D004716 ORTHO05D005646 9.4e-182 641.0 487 66.9
CDE08G0143 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 3.0e-180 636.0 619 58.0
Migut.C01013 Erythranthe guttata HOM05D004716 ORTHO05D005646 2.1e-173 613.2 624 54.6
SHI09390 Sapria himalayana HOM05D004716 ORTHO05D005646 6.1e-173 611.7 474 63.5
CSS0049856 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 3.7e-170 602.4 457 67.2
Lj4C695G10 Lonicera japonica HOM05D004716 ORTHO05D005646 1.8e-169 600.1 609 54.2
Oeu011938.1 Olea europaea HOM05D004716 ORTHO05D005646 2.7e-168 596.3 627 53.7
SalBow6G6163 Salvia bowleyana HOM05D004716 ORTHO05D005646 3.8e-167 592.4 686 50.3
HPP92_019355 Vanilla planifolia HOM05D004716 ORTHO05D005646 2.7e-165 586.3 555 57.7
Cpa.g.sc21.190 Carica papaya HOM05D004716 ORTHO05D005646 1.2e-163 580.9 432 68.8
SMO331G0079 Selaginella moellendorffii HOM05D004716 ORTHO05D005646 4.4e-163 578.9 599 51.4
SGA_v2.0_scaffold24G10374 Striga asiatica HOM05D004716 ORTHO05D005646 2.2e-162 576.6 643 52.9
Ca_25988_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 3.5e-160 569.3 400 70.0
Mapoly0014s0164 Marchantia polymorpha HOM05D004716 ORTHO05D005646 5.7e-155 552.0 655 47.0
ATR0772G093 Amborella trichopoda HOM05D004716 ORTHO05D005646 1.3e-154 550.8 461 61.0
Sc02g0004170 Simmondsia chinensis HOM05D004716 ORTHO05D005646 2.0e-152 543.5 447 62.9
Pp3c6_18530 Physcomitrium patens HOM05D004716 ORTHO05D005646 5.0e-151 538.9 653 47.9
CDE06G2375 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 5.6e-150 535.4 609 50.6
Pp3c5_6660 Physcomitrium patens HOM05D004716 ORTHO05D005646 1.8e-148 530.4 650 47.5
Oeu014493.1 Olea europaea HOM05D004716 ORTHO05D005646 1.7e-146 523.9 359 71.0
Psat6g193200 Pisum sativum HOM05D004716 ORTHO05D005646 4.1e-145 519.2 318 77.4
AagrBONN_evm.TU.Sc2ySwM_344.4417 Anthoceros agrestis HOM05D004716 ORTHO05D005646 3.5e-144 516.2 678 44.4
Psat6g193040 Pisum sativum HOM05D004716 ORTHO05D005646 4.1e-137 492.7 303 75.9
vmacro21155 Vaccinium macrocarpon HOM05D004716 ORTHO05D005646 6.4e-130 468.8 313 71.9
Zm00001eb422260 Zea mays HOM05D004716 ORTHO05D005646 1.0e-127 461.5 313 70.6
CBR_g11170 Chara braunii HOM05D004716 ORTHO05D005646 5.8e-123 445.7 554 45.1
Os04g0421800 Oryza sativa ssp. japonica HOM05D004716 ORTHO05D005646 6.6e-119 432.2 301 68.1
HanXRQChr10g0277841 Helianthus annuus HOM05D004716 ORTHO05D005646 8.4e-106 388.7 316 64.2
Zm00001eb422280 Zea mays HOM05D004716 ORTHO05D005646 1.9e-97 360.9 258 67.4
Zm00001eb422320 Zea mays HOM05D004716 ORTHO05D005646 1.9e-97 360.9 258 67.4
Actinidia10653 Actinidia chinensis HOM05D004716 ORTHO05D005646 1.5e-62 245.0 227 61.2
PRCOL_00002924 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 8.5e-58 229.2 345 38.0
VMungo0464G1352 Vigna mungo HOM05D004716 ORTHO05D005646 3.7e-45 187.2 241 50.2
Cpa.g.sc21.191 Carica papaya HOM05D004716 ORTHO05D005646 5.9e-43 179.9 176 60.8
CAN.G309.90 Capsicum annuum HOM05D004716 ORTHO05D005646 1.6e-32 145.2 193 45.6
Cre06.g286600 Chlamydomonas reinhardtii HOM05D004716 ORTHO05D005646 8.0e-32 142.9 308 34.1
ATR0772G018 Amborella trichopoda HOM05D004716 ORTHO05D005646 2.2e-29 134.8 197 46.7
PRCOL_00004133 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 1.6e-27 128.6 293 33.4
Actinidia13988 Actinidia chinensis HOM05D004716 ORTHO05D005646 1.2e-24 119.0 87 60.9
Actinidia10651 Actinidia chinensis HOM05D004716 ORTHO05D005646 2.1e-24 118.2 162 48.8
Ca_25987_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 6.4e-21 106.7 133 52.6
Oeu014494.1 Olea europaea HOM05D004716 ORTHO05D005646 2.1e-16 91.7 149 42.3
SEGI_31186 Sequoiadendron giganteum HOM05D004716 ORTHO05D005646 2.1e-16 91.7 152 43.4
TAR636G3535 Trochodendron aralioides HOM05D004716 ORTHO05D005646 3.1e-15 87.8 92 56.5
HanXRQChr10g0277851 Helianthus annuus HOM05D004716 ORTHO05D005646 5.2e-15 87.0 106 52.8
CSS0021208 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 2.2e-13 81.6 140 40.0
Ca_26438_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 1.2e-11 75.9 134 42.5
PGSC0003DMG401024092 Solanum tuberosum HOM05D004716 ORTHO05D005646 4.3e-09 67.4 170 32.4
Psat6g193080 Pisum sativum HOM05D000257 ORTHO05D008537 6.2e-08 63.5 63 49.2


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