Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G50930 Arabidopsis lyrata HOM05D005261 ORTHO05D006180 1.3e-184 649.8 379 100.0
Carub.0001s3363 Capsella rubella HOM05D005261 ORTHO05D006180 3.0e-178 628.6 384 95.3
AT1G36310 Arabidopsis thaliana HOM05D005261 ORTHO05D006180 3.8e-173 611.7 379 94.2
Thhalv10004311m.g Eutrema salsugineum HOM05D005261 ORTHO05D006180 6.6e-165 584.3 383 84.3
Sp1g30710 Schrenkiella parvula HOM05D005261 ORTHO05D006180 2.2e-160 569.3 383 82.8
Aa31LG6G9000 Aethionema arabicum HOM05D005261 ORTHO05D006180 1.2e-158 563.5 386 81.3
A08p07950 Brassica napus HOM05D005261 ORTHO05D006180 8.6e-157 557.4 379 81.8
BcaC07g37496 Brassica carinata HOM05D005261 ORTHO05D006180 3.3e-156 555.4 379 81.3
BolC8t47816H Brassica oleracea HOM05D005261 ORTHO05D006180 3.3e-156 555.4 379 81.3
BraA08t32817Z Brassica rapa HOM05D005261 ORTHO05D006180 9.5e-156 553.9 379 81.5
BcaB03g13642 Brassica carinata HOM05D005261 ORTHO05D006180 8.9e-154 547.4 379 81.0
CARHR034970 Cardamine hirsuta HOM05D005261 ORTHO05D006180 8.9e-154 547.4 375 79.7
THA.LOC104813129 Tarenaya hassleriana HOM05D005261 ORTHO05D006180 1.0e-149 533.9 374 73.3
BcaC02g11530 Brassica carinata HOM05D005261 ORTHO05D006180 1.3e-149 533.5 378 73.5
BraA05t20051Z Brassica rapa HOM05D005261 ORTHO05D006180 5.2e-146 521.5 377 71.4
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 1.3e-144 516.9 368 72.8
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 1.0e-141 507.3 368 71.2
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 6.6e-141 504.6 363 72.7
Thecc.08G114100 Theobroma cacao HOM05D005261 ORTHO05D006180 2.8e-131 472.6 376 66.2
Gohir.D06G040600 Gossypium hirsutum HOM05D005261 ORTHO05D006180 1.1e-130 470.7 374 66.3
Gorai.010G045400 Gossypium raimondii HOM05D005261 ORTHO05D006180 1.4e-130 470.3 374 66.3
Duzib093G0733 Durio zibethinus HOM05D005261 ORTHO05D006180 3.1e-130 469.2 382 64.9
Ciclev10001407m.g Citrus clementina HOM05D005261 ORTHO05D006180 1.2e-129 467.2 374 64.2
Manes.02G212400 Manihot esculenta HOM05D005261 ORTHO05D006180 8.4e-128 461.1 374 63.9
TWI36G1273 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 1.9e-127 459.9 376 63.6
Prupe.1G509000 Prunus persica HOM05D005261 ORTHO05D006180 4.2e-127 458.8 373 64.1
Sabra02G0072100 Salix brachista HOM05D005261 ORTHO05D006180 2.1e-126 456.4 375 63.7
Cfa015937 Carpinus fangiana HOM05D005261 ORTHO05D006180 2.7e-126 456.1 373 63.5
Atru.chr13.1289 Acer truncatum HOM05D005261 ORTHO05D006180 1.3e-125 453.8 387 62.8
CANSAT54G1848 Cannabis sativa HOM05D005261 ORTHO05D006180 1.3e-125 453.8 378 64.3
Cpa.g.sc77.98 Carica papaya HOM05D005261 ORTHO05D006180 1.8e-125 453.4 378 63.5
Eucgr.H00927 Eucalyptus grandis HOM05D005261 ORTHO05D006180 3.0e-125 452.6 338 68.3
GSVIVG01008967001 Vitis vinifera HOM05D005261 ORTHO05D006180 1.1e-124 450.7 335 67.5
CiPaw.06G023200 Carya illinoinensis HOM05D005261 ORTHO05D006180 2.5e-124 449.5 373 62.5
MD08G1174900 Malus domestica HOM05D005261 ORTHO05D006180 4.3e-124 448.7 373 63.3
PGR042G1365 Punica granatum HOM05D005261 ORTHO05D006180 5.6e-124 448.4 340 67.4
FAN08G3477 Fragaria x ananassa HOM05D005261 ORTHO05D006180 7.4e-124 448.0 375 63.5
Cc10_g05970 Coffea canephora HOM05D005261 ORTHO05D006180 9.6e-124 447.6 344 65.4
FAN13G1502 Fragaria x ananassa HOM05D005261 ORTHO05D006180 2.1e-123 446.4 375 63.2
QL12p035629 Quercus lobata HOM05D005261 ORTHO05D006180 2.1e-123 446.4 371 63.1
Duzib041G0715 Durio zibethinus HOM05D005261 ORTHO05D006180 3.7e-123 445.7 365 65.8
FvH4_5g38270 Fragaria vesca HOM05D005261 ORTHO05D006180 3.7e-123 445.7 375 63.2
FAN04G2261 Fragaria x ananassa HOM05D005261 ORTHO05D006180 3.7e-123 445.7 375 63.7
HanXRQChr02g0043751 Helianthus annuus HOM05D005261 ORTHO05D006180 4.8e-123 445.3 340 65.0
FAN18G3314 Fragaria x ananassa HOM05D005261 ORTHO05D006180 8.1e-123 444.5 375 62.7
RcHm_v2.0_Chr7g0240261 Rosa chinensis HOM05D005261 ORTHO05D006180 8.1e-123 444.5 373 63.0
Solyc04g072390.3 Solanum lycopersicum HOM05D005261 ORTHO05D006180 1.8e-122 443.4 355 64.8
Nitab4.5_0002561g0060 Nicotiana tabacum HOM05D005261 ORTHO05D006180 3.1e-122 442.6 373 62.5
VMungo1309G2277 Vigna mungo HOM05D005261 ORTHO05D006180 3.1e-122 442.6 340 66.5
Glyma.06G107100 Glycine max HOM05D005261 ORTHO05D006180 4.0e-122 442.2 377 62.3
Sopen04g028560 Solanum pennellii HOM05D005261 ORTHO05D006180 5.3e-122 441.8 355 64.5
Actinidia31491 Actinidia chinensis HOM05D005261 ORTHO05D006180 6.9e-122 441.4 374 62.3
Phvul.009G027100 Phaseolus vulgaris HOM05D005261 ORTHO05D006180 6.9e-122 441.4 378 62.7
MBI02_g34268_MAGBIO Magnolia biondii HOM05D005261 ORTHO05D006180 9.0e-122 441.0 360 63.1
Sed0017821 Sechium edule HOM05D005261 ORTHO05D006180 1.2e-121 440.7 377 62.6
CAN.G617.12 Capsicum annuum HOM05D005261 ORTHO05D006180 2.0e-121 439.9 351 64.1
Haze_00548 Corylus avellana HOM05D005261 ORTHO05D006180 2.0e-121 439.9 404 59.2
Nitab4.5_0001915g0120 Nicotiana tabacum HOM05D005261 ORTHO05D006180 2.6e-121 439.5 374 61.8
Nitab4.5_0003428g0020 Nicotiana tabacum HOM05D005261 ORTHO05D006180 2.6e-121 439.5 373 61.9
Glyma.04G107300 Glycine max HOM05D005261 ORTHO05D006180 3.4e-121 439.1 373 62.2
MELO3C008135.2 Cucumis melo HOM05D005261 ORTHO05D006180 9.9e-121 437.6 373 63.8
Dinv13059 Davidia involucrata HOM05D005261 ORTHO05D006180 9.9e-121 437.6 338 65.4
Dinv44727 Davidia involucrata HOM05D005261 ORTHO05D006180 9.9e-121 437.6 376 61.7
CsaV3_2G033630 Cucumis sativus L. HOM05D005261 ORTHO05D006180 1.3e-120 437.2 372 62.9
ClCG11G007980 Citrullus lanatus HOM05D005261 ORTHO05D006180 1.7e-120 436.8 397 60.2
arahy.Tifrunner.gnm1.ann1.S5D643 Arachis hypogaea HOM05D005261 ORTHO05D006180 3.8e-120 435.6 347 64.8
Lsat_1_v5_gn_1_3980 Lactuca sativa HOM05D005261 ORTHO05D006180 6.4e-120 434.9 345 64.6
RhsimUnG0073100 Rhododendron simsii HOM05D005261 ORTHO05D006180 6.4e-120 434.9 376 60.9
TPR.G16249 Trifolium pratense HOM05D005261 ORTHO05D006180 6.4e-120 434.9 364 64.0
MSTRG.24247 Avicennia marina HOM05D005261 ORTHO05D006180 8.4e-120 434.5 363 61.2
Ca_26314_v3 Cicer arietinum L. HOM05D005261 ORTHO05D006180 8.4e-120 434.5 343 65.0
Hma1.2p1_0276F.1_g111380 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 1.1e-119 434.1 334 65.6
Rhsim07G0199400 Rhododendron simsii HOM05D005261 ORTHO05D006180 1.9e-119 433.3 376 60.6
DCAR_023858 Daucus carota HOM05D005261 ORTHO05D006180 4.2e-119 432.2 339 64.3
EL10Ac1g01697 Beta vulgaris HOM05D005261 ORTHO05D006180 5.5e-119 431.8 372 59.4
SGA_v2.0_scaffold12G05968 Striga asiatica HOM05D005261 ORTHO05D006180 5.5e-119 431.8 335 64.8
Aqoxy6G00521 Aquilegia oxysepala HOM05D005261 ORTHO05D006180 7.1e-119 431.4 369 61.2
Medtr2g460880 Medicago truncatula HOM05D005261 ORTHO05D006180 7.1e-119 431.4 340 65.6
vmacro04773 Vaccinium macrocarpon HOM05D005261 ORTHO05D006180 1.6e-118 430.3 374 59.6
arahy.Tifrunner.gnm1.ann1.232HHD Arachis hypogaea HOM05D005261 ORTHO05D006180 2.7e-118 429.5 347 64.3
Lj1g0011675 Lotus japonicus HOM05D005261 ORTHO05D006180 7.9e-118 427.9 351 63.5
PSO541G3947 Papaver somniferum HOM05D005261 ORTHO05D006180 7.9e-118 427.9 348 62.6
Psat5g135960 Pisum sativum HOM05D005261 ORTHO05D006180 7.9e-118 427.9 353 65.2
PSO447G0033 Papaver somniferum HOM05D005261 ORTHO05D006180 1.3e-117 427.2 348 62.6
Sc14g0001090 Simmondsia chinensis HOM05D005261 ORTHO05D006180 1.3e-117 427.2 374 61.8
PSO675G0151 Papaver somniferum HOM05D005261 ORTHO05D006180 1.8e-117 426.8 348 62.4
Ah.03g139490 Amaranthus hybridus HOM05D005261 ORTHO05D006180 2.3e-117 426.4 340 62.4
Gohir.A06G039700 Gossypium hirsutum HOM05D005261 ORTHO05D006180 6.7e-117 424.9 374 61.5
TWI56G1213 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 7.4e-116 421.4 349 64.2
CDE02G3063 Ceratophyllum demersum HOM05D005261 ORTHO05D006180 9.6e-116 421.0 360 61.1
Migut.N03156 Erythranthe guttata HOM05D005261 ORTHO05D006180 9.6e-116 421.0 341 62.8
Os02g0750500 Oryza sativa ssp. japonica HOM05D005261 ORTHO05D006180 1.3e-115 420.6 352 61.6
unitig_22.g6794 Utricularia gibba HOM05D005261 ORTHO05D006180 6.2e-115 418.3 347 60.2
SEGI_02326 Sequoiadendron giganteum HOM05D005261 ORTHO05D006180 1.4e-114 417.2 339 62.2
Zm00001eb255040 Zea mays HOM05D005261 ORTHO05D006180 4.9e-112 408.7 335 63.0
TAR625G1239 Trochodendron aralioides HOM05D005261 ORTHO05D006180 5.5e-111 405.2 347 62.2
SHI24797 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-110 402.1 338 60.7
Potri.002G091300 Populus trichocarpa HOM05D005261 ORTHO05D006180 2.5e-108 396.4 384 57.0
HPP92_001925 Vanilla planifolia HOM05D005261 ORTHO05D006180 1.6e-107 393.7 339 59.0
Nn5g28978 Nelumbo nucifera HOM05D005261 ORTHO05D006180 3.7e-107 392.5 335 63.6
AUR62022337 Chenopodium quinoa HOM05D005261 ORTHO05D006180 1.5e-105 387.1 348 59.5
AagrBONN_evm.TU.Sc2ySwM_228.1177 Anthoceros agrestis HOM05D005261 ORTHO05D006180 2.6e-105 386.3 332 56.9
AUR62034370 Chenopodium quinoa HOM05D005261 ORTHO05D006180 3.4e-105 386.0 349 59.3
Peaxi162Scf00756g00436 Petunia axillaris HOM05D005261 ORTHO05D006180 4.5e-105 385.6 353 60.6
Mapoly0189s0001 Marchantia polymorpha HOM05D005261 ORTHO05D006180 5.9e-105 385.2 374 53.7
AUR62033704 Chenopodium quinoa HOM05D005261 ORTHO05D006180 8.5e-104 381.3 336 59.2
AUR62036786 Chenopodium quinoa HOM05D005261 ORTHO05D006180 3.6e-102 375.9 336 58.6
ATR0564G365 Amborella trichopoda HOM05D005261 ORTHO05D006180 1.4e-101 374.0 322 61.2
Pp3c8_16200 Physcomitrium patens HOM05D005261 ORTHO05D006180 9.7e-100 367.9 373 53.1
SMO361G0461 Selaginella moellendorffii HOM05D005261 ORTHO05D006180 1.3e-99 367.5 336 56.8
Oeu020872.1 Olea europaea HOM05D005261 ORTHO05D006180 6.9e-98 361.7 321 58.6
SHI53236 Sapria himalayana HOM05D005261 ORTHO05D006180 1.2e-94 350.9 367 51.5
SalBow8G1448 Salvia bowleyana HOM05D005261 ORTHO05D006180 9.7e-92 341.3 377 61.0
Lj3C845T19 Lonicera japonica HOM05D005261 ORTHO05D006180 4.4e-84 315.8 209 74.6
ECA247G1584 Erigeron canadensis HOM05D000230 ORTHO05D006180 2.2e-83 313.5 265 58.9
SHI35611 Sapria himalayana HOM05D005261 ORTHO05D006180 2.8e-83 313.2 325 52.3
Hma1.2p1_0276F.1_g111370 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 1.4e-82 310.8 193 77.2
Lalb_Chr17g0344051 Lupinus albus HOM05D005261 ORTHO05D006180 2.7e-78 296.6 253 60.9
CBR_g15981 Chara braunii HOM05D005261 ORTHO05D006180 1.4e-77 294.3 342 46.5
SHI34852 Sapria himalayana HOM05D005261 ORTHO05D006180 1.1e-58 231.5 337 42.4
COL.COLO4_16503 Corchorus olitorius HOM05D005261 ORTHO05D006180 1.4e-58 231.1 218 60.1
SHI34844 Sapria himalayana HOM05D005261 ORTHO05D006180 1.4e-53 214.5 330 40.9
SHI20620 Sapria himalayana HOM05D005261 ORTHO05D006180 1.7e-51 207.6 292 42.8
SHI43763 Sapria himalayana HOM05D005261 ORTHO05D006180 4.1e-50 203.0 159 64.2
SHI46120 Sapria himalayana HOM05D005261 ORTHO05D006180 6.0e-49 199.1 159 64.2
PRCOL_00005291 Prasinoderma coloniale HOM05D005261 ORTHO05D006180 8.6e-48 195.3 350 36.9
SHI53472 Sapria himalayana HOM05D005261 ORTHO05D006180 2.1e-46 190.7 167 59.9
SHI52923 Sapria himalayana HOM05D005261 ORTHO05D006180 6.4e-43 179.1 167 57.5
SHI32317 Sapria himalayana HOM05D005261 ORTHO05D006180 3.0e-40 170.2 339 34.2
Oeu017307.1 Olea europaea HOM05D005261 ORTHO05D006180 1.2e-38 164.9 98 80.6
Cre04.g224002 Chlamydomonas reinhardtii HOM05D005261 ORTHO05D006180 3.6e-38 163.3 167 49.1
SHI54958 Sapria himalayana HOM05D005261 ORTHO05D006180 4.0e-37 159.8 112 71.4
Rhsim10G0118000 Rhododendron simsii HOM05D005261 ORTHO05D006180 6.4e-35 152.5 204 45.6
SHI53189 Sapria himalayana HOM05D005261 ORTHO05D006180 9.2e-34 148.7 164 53.7
SHI49977 Sapria himalayana HOM05D005261 ORTHO05D006180 2.8e-30 137.1 190 41.1
SHI49044 Sapria himalayana HOM05D005261 ORTHO05D006180 2.6e-28 130.6 125 58.4
MCO14G461 Micromonas commoda HOM05D005261 ORTHO05D006180 1.9e-26 124.4 150 43.3
SHI51067 Sapria himalayana HOM05D005261 ORTHO05D006180 2.5e-23 114.0 139 46.0
Lj3A845G93 Lonicera japonica HOM05D005261 ORTHO05D006180 4.7e-22 109.8 56 89.3
SHI52089 Sapria himalayana HOM05D005261 ORTHO05D006180 4.7e-22 109.8 140 45.0
PGSC0003DMG401027564 Solanum tuberosum HOM05D001663 ORTHO05D003186 1.1e-21 108.6 54 92.6
SHI51747 Sapria himalayana HOM05D005261 ORTHO05D006180 6.9e-21 105.9 140 43.6
Rhsim13G0124000 Rhododendron simsii HOM05D005261 ORTHO05D006180 1.4e-18 98.2 207 35.3
SHI41608 Sapria himalayana HOM05D005261 ORTHO05D006180 1.0e-16 92.0 141 44.0
SHI50342 Sapria himalayana HOM05D005261 ORTHO05D006180 7.9e-09 65.9 37 86.5


User provided reference genes

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