Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G50110 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 1.0e-137 493.4 255 100.0
AL1G50190 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 3.8e-92 342.0 268 71.6
AL1G50210 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 9.4e-83 310.8 246 69.1
AL1G50170 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 4.9e-71 271.9 254 60.6
AL1G50150 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 1.2e-66 257.3 247 59.1
AT3G27900 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 8.3e-63 244.6 263 58.9
Carub.0001s3300 Capsella rubella HOM05D008252 ORTHO05D011960 5.4e-62 241.9 248 58.9
AL1G50120 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 9.2e-54 214.5 241 53.1
AL1G50220 Arabidopsis lyrata HOM05D008252 ORTHO05D011960 9.2e-54 214.5 243 53.5
Thhalv10001856m.g Eutrema salsugineum HOM05D008252 ORTHO05D011960 7.8e-53 211.5 242 49.6
Thhalv10001845m.g Eutrema salsugineum HOM05D008252 ORTHO05D011960 1.7e-47 193.7 216 52.3
Carub.0001s3301 Capsella rubella HOM05D008252 ORTHO05D011960 2.2e-47 193.4 240 50.8
Carub.0001s3298 Capsella rubella HOM05D008252 ORTHO05D011960 4.6e-45 185.7 237 46.8
BolC5t33176H Brassica oleracea HOM05D001339 ORTHO05D003609 8.1e-42 174.9 238 46.6
C05p44090 Brassica napus HOM05D008252 ORTHO05D011960 8.9e-41 171.4 227 46.3
AT1G34560 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 1.5e-40 170.6 215 49.3
C05p44520 Brassica napus HOM05D001339 ORTHO05D003609 4.2e-38 162.5 252 43.3
A05p29110 Brassica napus HOM05D008252 ORTHO05D011960 1.2e-37 161.0 241 44.0
AT1G35353 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 7.8e-37 158.3 241 46.1
BraA05t21794Z Brassica rapa HOM05D008252 ORTHO05D011960 1.7e-36 157.1 239 43.1
BcaC05g28344 Brassica carinata HOM05D008252 ORTHO05D011960 3.0e-36 156.4 196 46.4
BolC5t33132H Brassica oleracea HOM05D008252 ORTHO05D011960 3.3e-35 152.9 196 45.9
BcaC05g28373 Brassica carinata HOM05D008252 ORTHO05D011960 1.6e-34 150.6 198 46.0
AT1G35365 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 6.2e-34 148.7 248 42.3
Carub.0004s2077 Capsella rubella HOM05D008252 ORTHO05D011866 2.4e-33 146.7 208 41.8
Thhalv10023974m.g Eutrema salsugineum HOM05D008252 ORTHO05D016722 2.4e-33 146.7 162 49.4
AL2G10340 Arabidopsis lyrata HOM05D008252 ORTHO05D011866 5.4e-30 135.6 213 39.0
Sp1g31080 Schrenkiella parvula HOM05D008252 ORTHO05D011866 9.3e-30 134.8 230 39.1
CARHR292080 Cardamine hirsuta HOM05D008252 ORTHO05D011866 1.6e-29 134.0 247 40.5
Carub.0002s0028 Capsella rubella HOM05D008252 ORTHO05D011866 3.5e-29 132.9 175 41.7
Carub.0002s0047 Capsella rubella HOM05D008252 ORTHO05D011866 9.6e-27 124.8 204 38.2
BcaB07g30392 Brassica carinata HOM05D008252 ORTHO05D011866 3.6e-26 122.9 230 38.3
BcaC03g18231 Brassica carinata HOM05D008252 ORTHO05D011866 4.8e-26 122.5 210 38.1
BolC2t12374H Brassica oleracea HOM05D008252 ORTHO05D011866 4.8e-26 122.5 210 38.1
C02p63000 Brassica napus HOM05D008252 ORTHO05D011866 1.4e-25 120.9 210 37.1
A02p43040 Brassica napus HOM05D008252 ORTHO05D011866 2.4e-25 120.2 201 44.8
A05p28690 Brassica napus HOM05D008252 ORTHO05D011960 2.4e-25 120.2 226 38.9
C03p26460 Brassica napus HOM05D008252 ORTHO05D011866 1.2e-24 117.9 209 37.8
AL3G29480 Arabidopsis lyrata HOM05D008252 ORTHO05D011866 2.6e-24 116.7 163 43.6
Sp6g04270 Schrenkiella parvula HOM05D008252 ORTHO05D016722 4.5e-24 115.9 177 40.1
Carub.0001s3259 Capsella rubella HOM05D008252 ORTHO05D011960 4.2e-22 109.4 238 37.4
BcaB06g29196 Brassica carinata HOM05D008252 ORTHO05D016722 7.1e-22 108.6 163 38.7
Thhalv10014714m.g Eutrema salsugineum HOM05D008252 ORTHO05D011866 6.0e-21 105.5 203 37.4
CARHR052650 Cardamine hirsuta HOM05D008252 ORTHO05D011866 2.3e-20 103.6 158 39.2
AT1G35400 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 8.7e-20 101.7 219 33.3
Thhalv10024117m.g Eutrema salsugineum HOM05D008252 ORTHO05D016722 8.7e-20 101.7 175 38.9
A02p32120 Brassica napus HOM05D008252 ORTHO05D011866 2.5e-19 100.1 211 30.3
BcaC03g17048 Brassica carinata HOM05D008252 ORTHO05D011866 7.4e-19 98.6 211 29.9
C02p49660 Brassica napus HOM05D008252 ORTHO05D011866 7.4e-19 98.6 211 29.9
AT1G35410 Arabidopsis thaliana HOM05D008252 ORTHO05D011960 9.6e-19 98.2 199 34.7
CARHR078100 Cardamine hirsuta HOM05D008252 ORTHO05D011866 4.5e-16 89.4 156 37.8
BolC4t28412H Brassica oleracea HOM05D008252 ORTHO05D016722 5.8e-16 89.0 163 33.7
AL3G39130 Arabidopsis lyrata HOM05D008252 ORTHO05D011866 7.6e-16 88.6 115 40.9
BcaB06g29195 Brassica carinata HOM05D008252 ORTHO05D016722 1.6e-13 80.9 188 33.0
BcaC02g07300 Brassica carinata HOM05D008252 ORTHO05D016722 1.6e-13 80.9 188 33.0
BcaB02g09764 Brassica carinata HOM05D008252 ORTHO05D011866 2.3e-12 77.0 169 33.1
BcaC03g17049 Brassica carinata HOM05D008252 ORTHO05D011866 2.1e-10 70.5 143 30.1
C02p49670 Brassica napus HOM05D008252 ORTHO05D011866 2.1e-10 70.5 143 30.1
BraA02t08226Z Brassica rapa HOM05D008252 ORTHO05D011866 3.7e-10 69.7 198 26.3
BcaB06g29193 Brassica carinata HOM05D008252 ORTHO05D016722 2.6e-08 63.5 132 34.8
BcaC02g07301 Brassica carinata HOM05D008252 ORTHO05D016722 3.4e-08 63.2 133 34.6


User provided reference genes

Program Settings