Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 4.1e-154 548.1 294 100.0
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 2.9e-136 488.8 294 89.5
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 5.7e-132 474.6 298 86.2
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 5.3e-130 468.0 296 85.5
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 9.1e-130 467.2 297 85.9
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 6.5e-128 461.1 296 84.5
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 1.1e-127 460.3 296 84.5
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 1.5e-127 459.9 296 84.5
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 5.2e-125 451.4 275 87.6
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 3.3e-124 448.7 297 83.2
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 1.3e-104 383.6 211 96.7
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 2.7e-97 359.4 280 68.2
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 3.9e-88 328.9 260 70.0
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 5.0e-88 328.6 262 64.9
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 1.1e-85 320.9 302 60.3
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 1.4e-85 320.5 250 66.8
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 1.4e-85 320.5 298 59.7
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 2.3e-85 319.7 258 66.3
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 1.2e-84 317.4 259 64.1
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 2.9e-83 312.8 258 63.2
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 3.7e-83 312.4 297 58.2
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 8.3e-83 311.2 297 58.2
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 1.4e-82 310.5 233 70.0
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 2.4e-82 309.7 293 57.3
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 3.5e-81 305.8 253 64.4
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 4.6e-81 305.4 265 62.6
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 6.0e-81 305.1 271 61.3
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 1.3e-80 303.9 297 57.2
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 1.3e-80 303.9 313 55.9
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 1.3e-80 303.9 284 57.7
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 1.3e-80 303.9 257 61.9
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 1.7e-80 303.5 258 61.2
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 6.6e-80 301.6 257 60.7
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 8.6e-80 301.2 249 62.2
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 5.6e-79 298.5 258 60.5
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 5.6e-79 298.5 261 60.9
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 2.8e-78 296.2 250 61.6
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 6.2e-78 295.0 246 63.0
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 1.2e-76 290.8 261 58.6
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 2.0e-76 290.0 257 60.7
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 2.0e-76 290.0 253 59.3
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 2.0e-76 290.0 244 63.9
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 2.6e-76 289.7 243 63.4
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 3.4e-76 289.3 296 56.4
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 7.6e-76 288.1 244 63.5
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 6.4e-75 285.0 248 60.5
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 1.3e-72 277.3 288 56.6
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 2.3e-72 276.6 247 61.9
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 4.4e-68 262.3 281 53.0
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 9.9e-68 261.2 303 50.5
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 1.7e-67 260.4 210 64.8
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 2.2e-67 260.0 296 51.4
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 2.4e-66 256.5 235 59.1
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 2.7e-65 253.1 215 61.9
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 1.0e-64 251.1 147 89.1
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 8.7e-64 248.1 212 61.8
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 9.6e-63 244.6 251 56.2
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 1.3e-62 244.2 210 60.0
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 8.1e-62 241.5 248 52.0
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 4.2e-58 229.2 244 51.2
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 2.7e-57 226.5 209 58.4
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 1.1e-50 204.5 248 46.0
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 2.4e-45 186.8 287 38.7
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 2.6e-44 183.3 143 66.4
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 8.4e-43 178.3 246 45.9
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 5.1e-32 142.5 133 60.9
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 5.7e-31 139.0 100 72.0
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 2.4e-29 133.7 125 57.6
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 1.5e-28 131.0 86 76.7
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 7.7e-28 128.6 233 34.3
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 2.3e-24 117.1 87 66.7
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 3.2e-18 96.7 101 51.5
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 3.2e-18 96.7 110 50.0
Cre16.g670500 Chlamydomonas reinhardtii HOM05D003774 ORTHO05D010174 1.0e-11 75.1 362 23.8
MCO03G373 Micromonas commoda HOM05D003774 ORTHO05D010174 3.2e-10 70.1 290 27.6
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 4.2e-10 69.7 147 35.4
MBI03_g48045_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 4.8e-06 56.2 49 63.3


User provided reference genes

Program Settings