Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G50010 Arabidopsis lyrata HOM05D000090 ORTHO05D079226 1.1e-22 109.0 51 100.0
AL7G17260 Arabidopsis lyrata HOM05D000090 ORTHO05D000083 1.4e-09 65.5 40 72.5
CARHR109350 Cardamine hirsuta HOM05D000090 ORTHO05D000083 1.5e-08 62.0 47 59.6
BcaB07g30293 Brassica carinata HOM05D000090 ORTHO05D000083 5.8e-08 60.1 47 59.6
BcaC01g00925 Brassica carinata HOM05D000090 ORTHO05D000083 5.8e-08 60.1 47 59.6
BolC3t20891H Brassica oleracea HOM05D000090 ORTHO05D000083 5.8e-08 60.1 47 59.6
BraA08t33669Z Brassica rapa HOM05D000090 ORTHO05D000083 9.9e-08 59.3 40 65.0
Thhalv10025048m.g Eutrema salsugineum HOM05D000090 ORTHO05D000083 1.3e-07 58.9 40 65.0
Sp7g31860 Schrenkiella parvula HOM05D000090 ORTHO05D000083 2.9e-07 57.8 40 62.5
Sp7g31870 Schrenkiella parvula HOM05D000090 ORTHO05D000083 2.9e-07 57.8 40 62.5
A08p17070 Brassica napus HOM05D000090 ORTHO05D000083 4.9e-07 57.0 40 62.5
CARHR121600 Cardamine hirsuta HOM05D000090 ORTHO05D000083 6.4e-07 56.6 40 62.5
AL7G17250 Arabidopsis lyrata HOM05D000090 ORTHO05D000083 8.4e-07 56.2 40 62.5
AT4G34131 Arabidopsis thaliana HOM05D000090 ORTHO05D000083 1.1e-06 55.8 40 65.0
Carub.0007s0629 Capsella rubella HOM05D000090 ORTHO05D000083 1.1e-06 55.8 40 60.0
CARHR242260 Cardamine hirsuta HOM05D000090 ORTHO05D000083 1.1e-06 55.8 35 68.6
Carub.0007s0628 Capsella rubella HOM05D000090 ORTHO05D000083 1.9e-06 55.1 40 60.0
BcaC03g17228 Brassica carinata HOM05D000090 ORTHO05D000083 5.4e-06 53.5 47 55.3
C02p51600 Brassica napus HOM05D000090 ORTHO05D000083 5.4e-06 53.5 47 55.3
BolC2t11245H Brassica oleracea HOM05D000090 ORTHO05D000083 5.4e-06 53.5 47 55.3


User provided reference genes

Program Settings