Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G48790 Arabidopsis lyrata HOM05D003290 ORTHO05D003866 1.7e-168 595.9 297 100.0
AT1G14660 Arabidopsis thaliana HOM05D003290 ORTHO05D003866 5.4e-122 441.4 316 76.9
C05p12620 Brassica napus HOM05D003290 ORTHO05D003866 3.1e-109 399.1 316 69.6
BolC5t30005H Brassica oleracea HOM05D003290 ORTHO05D003866 3.1e-109 399.1 316 69.6
BcaC05g25383 Brassica carinata HOM05D003290 ORTHO05D003866 4.0e-109 398.7 316 69.6
BraA06t24252Z Brassica rapa HOM05D003290 ORTHO05D003866 6.8e-109 397.9 316 69.3
Sp1g13040 Schrenkiella parvula HOM05D003290 ORTHO05D003866 1.7e-107 393.3 316 69.0
Thhalv10006906m.g Eutrema salsugineum HOM05D003290 ORTHO05D003866 4.9e-107 391.7 316 69.9
AL1G26630 Arabidopsis lyrata HOM05D003290 ORTHO05D003866 3.2e-106 389.0 294 72.1
Carub.0001s1442 Capsella rubella HOM05D003290 ORTHO05D003866 4.2e-106 388.7 316 68.7
BcaB02g06535 Brassica carinata HOM05D003290 ORTHO05D003866 3.0e-104 382.5 313 68.7
Sp1g13030 Schrenkiella parvula HOM05D003290 ORTHO05D003866 1.5e-103 380.2 316 66.5
A06p10710 Brassica napus HOM05D003290 ORTHO05D003866 1.4e-101 373.6 319 66.5
THA.LOC104805106 Tarenaya hassleriana HOM05D003290 ORTHO05D003866 4.8e-94 348.6 316 61.1
BcaB07g30722 Brassica carinata HOM05D003290 ORTHO05D003866 2.4e-93 346.3 317 59.6
A09p23700 Brassica napus HOM05D003290 ORTHO05D003866 2.4e-93 346.3 317 59.6
BcaC04g21541 Brassica carinata HOM05D003290 ORTHO05D003866 3.1e-93 345.9 317 59.9
C09p30540 Brassica napus HOM05D003290 ORTHO05D003866 3.1e-93 345.9 317 59.9
BolC9t55917H Brassica oleracea HOM05D003290 ORTHO05D003866 3.1e-93 345.9 317 59.9
BraA09t37969Z Brassica rapa HOM05D003290 ORTHO05D003866 5.3e-93 345.1 317 59.6
AL5G11170 Arabidopsis lyrata HOM05D003290 ORTHO05D003866 2.0e-92 343.2 316 59.8
Aa31LG2G7940 Aethionema arabicum HOM05D003290 ORTHO05D003866 9.9e-92 340.9 316 59.8
AT2G01980 Arabidopsis thaliana HOM05D003290 ORTHO05D003866 9.9e-92 340.9 318 59.7
Carub.0005s0099 Capsella rubella HOM05D003290 ORTHO05D003866 1.7e-91 340.1 317 58.7
Thhalv10003547m.g Eutrema salsugineum HOM05D003290 ORTHO05D003866 1.7e-91 340.1 317 58.7
CARHR015150 Cardamine hirsuta HOM05D003290 ORTHO05D003866 1.2e-89 334.0 207 84.5
Sp2g13410 Schrenkiella parvula HOM05D003290 ORTHO05D003866 1.3e-88 330.5 313 58.8
PGR142G0945 Punica granatum HOM05D003290 ORTHO05D003866 3.3e-87 325.9 318 57.2
GSVIVG01011573001 Vitis vinifera HOM05D003290 ORTHO05D003866 1.1e-85 320.9 319 56.7
CANSAT78G1043 Cannabis sativa HOM05D003290 ORTHO05D003866 1.8e-85 320.1 318 56.6
Eucgr.G02062 Eucalyptus grandis HOM05D003290 ORTHO05D003866 1.8e-85 320.1 317 55.2
Migut.E00570 Erythranthe guttata HOM05D003290 ORTHO05D003866 4.0e-85 318.9 319 55.8
AUR62017800 Chenopodium quinoa HOM05D003290 ORTHO05D003866 1.2e-84 317.4 318 55.0
CsaV3_5G017250 Cucumis sativus L. HOM05D003290 ORTHO05D003866 1.2e-84 317.4 318 55.7
Lj4g0008630 Lotus japonicus HOM05D003290 ORTHO05D003866 1.5e-84 317.0 318 55.7
Potri.010G100900 Populus trichocarpa HOM05D003290 ORTHO05D003866 1.5e-84 317.0 319 56.1
Psat7g085560 Pisum sativum HOM05D003290 ORTHO05D003866 2.6e-84 316.2 318 55.3
Potri.008G140700 Populus trichocarpa HOM05D003290 ORTHO05D003866 3.4e-84 315.8 319 56.1
MELO3C005228.2 Cucumis melo HOM05D003290 ORTHO05D003866 4.5e-84 315.5 318 55.7
Dinv07020 Davidia involucrata HOM05D003290 ORTHO05D003866 5.8e-84 315.1 319 56.4
Ca_18198_v3 Cicer arietinum L. HOM05D003290 ORTHO05D003866 7.6e-84 314.7 318 55.3
VMungo0251G2069 Vigna mungo HOM05D003290 ORTHO05D003866 7.6e-84 314.7 318 55.3
Manes.15G139900 Manihot esculenta HOM05D003290 ORTHO05D003866 4.9e-83 312.0 319 56.1
Atru.chr11.983 Acer truncatum HOM05D003290 ORTHO05D003866 6.4e-83 311.6 319 54.9
Sp1g13020 Schrenkiella parvula HOM05D003290 ORTHO05D003866 6.4e-83 311.6 312 58.7
CARHR144580 Cardamine hirsuta HOM05D003290 ORTHO05D003866 8.4e-83 311.2 302 57.0
Lj4g0019755 Lotus japonicus HOM05D003290 ORTHO05D003866 8.4e-83 311.2 318 54.7
Cfa015081 Carpinus fangiana HOM05D003290 ORTHO05D003866 1.1e-82 310.8 320 55.9
TPR.G11847 Trifolium pratense HOM05D003290 ORTHO05D003866 1.1e-82 310.8 318 54.4
FAN22G1284 Fragaria x ananassa HOM05D003290 ORTHO05D003866 1.9e-82 310.1 318 55.3
RcHm_v2.0_Chr4g0445491 Rosa chinensis HOM05D003290 ORTHO05D003866 1.9e-82 310.1 318 55.7
Sabra08G0106800 Salix brachista HOM05D003290 ORTHO05D003866 2.5e-82 309.7 315 55.2
HanXRQChr15g0469331 Helianthus annuus HOM05D003290 ORTHO05D003866 3.2e-82 309.3 319 54.9
Hma1.2p1_0197F.1_g085170 Hydrangea macrophylla HOM05D003290 ORTHO05D003866 4.2e-82 308.9 319 54.5
FvH4_4g35880 Fragaria vesca HOM05D003290 ORTHO05D003866 5.5e-82 308.5 318 55.0
FAN12G1356 Fragaria x ananassa HOM05D003290 ORTHO05D003866 5.5e-82 308.5 318 55.0
Phvul.002G185150 Phaseolus vulgaris HOM05D003290 ORTHO05D003866 5.5e-82 308.5 318 55.3
ECA234G2339 Erigeron canadensis HOM05D003290 ORTHO05D003866 7.1e-82 308.1 319 54.9
Glyma.08G092000 Glycine max HOM05D003290 ORTHO05D003866 9.3e-82 307.8 318 54.1
Lalb_Chr13g0293001 Lupinus albus HOM05D003290 ORTHO05D003866 1.6e-81 307.0 320 54.1
Sc03g0005960 Simmondsia chinensis HOM05D003290 ORTHO05D003866 1.6e-81 307.0 306 56.9
COL.COLO4_27555 Corchorus olitorius HOM05D003290 ORTHO05D003866 2.1e-81 306.6 318 56.0
Gohir.D02G138100 Gossypium hirsutum HOM05D003290 ORTHO05D003866 3.5e-81 305.8 318 55.0
QL03p039662 Quercus lobata HOM05D003290 ORTHO05D003866 3.5e-81 305.8 320 54.4
ClCG01G006860 Citrullus lanatus HOM05D003290 ORTHO05D003866 4.6e-81 305.4 318 54.4
Gorai.005G154600 Gossypium raimondii HOM05D003290 ORTHO05D003866 7.9e-81 304.7 318 55.0
Sed0007344 Sechium edule HOM05D003290 ORTHO05D003866 7.9e-81 304.7 318 53.5
MSTRG.2101 Avicennia marina HOM05D003290 ORTHO05D003866 1.3e-80 303.9 319 53.6
CDE06G1581 Ceratophyllum demersum HOM05D003290 ORTHO05D003866 1.3e-80 303.9 321 53.3
TWI74G0523 Tripterygium wilfordii HOM05D003290 ORTHO05D003866 1.3e-80 303.9 319 54.9
Prupe.1G339200 Prunus persica HOM05D003290 ORTHO05D003866 2.3e-80 303.1 318 55.0
Actinidia12429 Actinidia chinensis HOM05D003290 ORTHO05D003866 3.0e-80 302.8 321 53.6
Thecc.02G301400 Theobroma cacao HOM05D003290 ORTHO05D003866 1.1e-79 300.8 318 54.4
Dinv02702 Davidia involucrata HOM05D003290 ORTHO05D003866 1.9e-79 300.1 321 53.6
Gohir.A03G113800 Gossypium hirsutum HOM05D003290 ORTHO05D003866 3.3e-79 299.3 318 54.7
PGSC0003DMG400022786 Solanum tuberosum HOM05D003290 ORTHO05D003866 5.6e-79 298.5 312 53.2
PSO729G0139 Papaver somniferum HOM05D003290 ORTHO05D003866 9.6e-79 297.7 321 52.0
Sopen01g001090 Solanum pennellii HOM05D003290 ORTHO05D003866 1.6e-78 297.0 312 53.2
Nn4g24593 Nelumbo nucifera HOM05D003290 ORTHO05D003866 2.1e-78 296.6 322 52.5
Solyc01g005020.3 Solanum lycopersicum HOM05D003290 ORTHO05D003866 2.1e-78 296.6 312 53.2
Ah.03g147350 Amaranthus hybridus HOM05D003290 ORTHO05D003866 2.8e-78 296.2 322 52.8
CAN.G282.94 Capsicum annuum HOM05D003290 ORTHO05D003866 2.8e-78 296.2 312 52.2
Lsat_1_v5_gn_5_35481 Lactuca sativa HOM05D003290 ORTHO05D003866 3.7e-78 295.8 318 51.9
EL10Ac6g15381 Beta vulgaris HOM05D003290 ORTHO05D003866 4.8e-78 295.4 322 52.8
arahy.Tifrunner.gnm1.ann1.GST19D Arachis hypogaea HOM05D003290 ORTHO05D003866 1.1e-77 294.3 315 53.7
arahy.Tifrunner.gnm1.ann1.P8F85A Arachis hypogaea HOM05D003290 ORTHO05D003866 1.1e-77 294.3 315 53.7
Nitab4.5_0007122g0010 Nicotiana tabacum HOM05D003290 ORTHO05D003866 1.4e-77 293.9 312 52.9
PSO170G6380 Papaver somniferum HOM05D003290 ORTHO05D003866 1.4e-77 293.9 359 47.6
SGA_v2.0_scaffold348G49593 Striga asiatica HOM05D003290 ORTHO05D003866 1.4e-77 293.9 323 52.3
AUR62003491 Chenopodium quinoa HOM05D003290 ORTHO05D003866 1.8e-77 293.5 371 47.4
PSO017G1263 Papaver somniferum HOM05D003290 ORTHO05D003866 2.4e-77 293.1 319 51.7
PSO170G2638 Papaver somniferum HOM05D003290 ORTHO05D003866 5.3e-77 292.0 306 52.6
Zm00001eb033240 Zea mays HOM05D003290 ORTHO05D003866 3.4e-76 289.3 320 52.5
HPP92_016411 Vanilla planifolia HOM05D003290 ORTHO05D003866 4.5e-76 288.9 319 52.4
Duzib268G0109 Durio zibethinus HOM05D003290 ORTHO05D003866 1.7e-75 287.0 321 53.0
ATR0598G076 Amborella trichopoda HOM05D003290 ORTHO05D003866 6.5e-75 285.0 312 52.9
FAN07G0883 Fragaria x ananassa HOM05D003290 ORTHO05D003866 1.4e-74 283.9 350 49.1
Manes.17G091100 Manihot esculenta HOM05D003290 ORTHO05D003866 1.4e-74 283.9 318 52.5
arahy.Tifrunner.gnm1.ann1.4ZG746 Arachis hypogaea HOM05D003290 ORTHO05D003866 3.2e-74 282.7 316 52.2
ECA246G3356 Erigeron canadensis HOM05D003290 ORTHO05D003866 5.5e-74 282.0 321 50.5
Aa31LG2G2650 Aethionema arabicum HOM05D003290 ORTHO05D003866 3.5e-73 279.3 297 55.6
Os12g0641100 Oryza sativa ssp. japonica HOM05D003290 ORTHO05D003866 4.6e-73 278.9 321 52.0
Aqoxy4G00109 Aquilegia oxysepala HOM05D003290 ORTHO05D003866 7.9e-73 278.1 328 49.1
Lj6C728G5 Lonicera japonica HOM05D003290 ORTHO05D003866 3.9e-72 275.8 280 55.4
Peaxi162Scf00349g00111 Petunia axillaris HOM05D003290 ORTHO05D003866 4.3e-71 272.3 311 51.1
TWI56G1413 Tripterygium wilfordii HOM05D003290 ORTHO05D003866 5.7e-71 271.9 303 53.1
Pp3c22_9570 Physcomitrium patens HOM05D003290 ORTHO05D003866 1.6e-70 270.4 312 48.4
PSO339G1388 Papaver somniferum HOM05D003290 ORTHO05D003866 4.8e-70 268.9 319 48.0
CSS0011262 Camellia sinensis var. sinensis HOM05D003290 ORTHO05D003866 3.8e-67 259.2 318 48.4
Mapoly0062s0025 Marchantia polymorpha HOM05D003290 ORTHO05D003866 5.5e-66 255.4 318 47.5
Cc11_g05270 Coffea canephora HOM05D003290 ORTHO05D003866 2.7e-65 253.1 265 54.0
HanXRQChr12g0381631 Helianthus annuus HOM05D003290 ORTHO05D003866 7.4e-63 245.0 317 48.9
AagrBONN_evm.TU.Sc2ySwM_368.1085 Anthoceros agrestis HOM05D003290 ORTHO05D003866 4.8e-62 242.3 318 45.9
Lsat_1_v5_gn_6_55260 Lactuca sativa HOM05D003290 ORTHO05D003866 1.1e-61 241.1 322 47.2
Pp3c16_14280 Physcomitrium patens HOM05D003290 ORTHO05D003866 1.8e-61 240.4 311 46.3
AagrBONN_evm.TU.Sc2ySwM_344.5331 Anthoceros agrestis HOM05D003290 ORTHO05D003866 6.9e-61 238.4 325 43.4
MD13G1014200 Malus domestica HOM05D003290 ORTHO05D003866 1.2e-60 237.7 264 52.3
TAR629G0420 Trochodendron aralioides HOM05D003290 ORTHO05D003866 5.9e-60 235.3 213 60.1
Rhsim09G0082800 Rhododendron simsii HOM05D003290 ORTHO05D003866 2.9e-59 233.0 469 36.2
SMO367G0872 Selaginella moellendorffii HOM05D003290 ORTHO05D003866 4.2e-58 229.2 314 44.3
Mapoly0206s0002 Marchantia polymorpha HOM05D003290 ORTHO05D003866 1.8e-56 223.8 283 47.0
SMO367G0300 Selaginella moellendorffii HOM05D003290 ORTHO05D003866 3.9e-56 222.6 313 44.1
MD16G1011500 Malus domestica HOM05D003290 ORTHO05D003866 1.8e-53 213.8 228 53.5
CiPaw.05G159900 Carya illinoinensis HOM05D003290 ORTHO05D003866 2.6e-52 209.9 196 59.7
BcaC05g25381 Brassica carinata HOM05D003290 ORTHO05D003866 2.1e-49 200.3 338 43.8
DCAR_030318 Daucus carota HOM05D003290 ORTHO05D003866 1.8e-48 197.2 289 43.9
Solyc04g018100.4 Solanum lycopersicum HOM05D003290 ORTHO05D003866 5.7e-47 192.2 321 39.6
Sopen04g009310 Solanum pennellii HOM05D003290 ORTHO05D003866 3.7e-46 189.5 321 38.6
unitig_27.g25301 Utricularia gibba HOM05D003290 ORTHO05D003866 1.8e-45 187.2 325 43.4
MBI13_g17879_MAGBIO Magnolia biondii HOM05D003290 ORTHO05D003866 1.7e-43 180.6 319 41.7
PGR102G1943 Punica granatum HOM05D003290 ORTHO05D003866 5.0e-43 179.1 310 40.3
MBI13_g26466_MAGBIO Magnolia biondii HOM05D003290 ORTHO05D003866 3.2e-42 176.4 155 60.0
vmacro10756 Vaccinium macrocarpon HOM05D003290 ORTHO05D003866 5.5e-42 175.6 221 48.0
unitig_699.g19544 Utricularia gibba HOM05D003290 ORTHO05D003866 2.3e-40 170.2 390 34.4
SEGI_13848 Sequoiadendron giganteum HOM05D003290 ORTHO05D003866 5.7e-39 165.6 178 52.2
CAN.G1237.29 Capsicum annuum HOM05D003290 ORTHO05D003866 3.1e-37 159.8 311 36.0
Nitab4.5_0005031g0060 Nicotiana tabacum HOM05D003290 ORTHO05D003866 4.1e-37 159.5 284 35.2
Cpa.g.sc2.68 Carica papaya HOM05D003290 ORTHO05D003866 6.5e-35 152.1 131 56.5
FvH4_4g35890 Fragaria vesca HOM05D003290 ORTHO05D003866 1.6e-33 147.5 193 48.2
Eucgr.B02635 Eucalyptus grandis HOM05D003290 ORTHO05D003866 2.1e-33 147.1 177 48.6
Nitab4.5_0009873g0010 Nicotiana tabacum HOM05D003290 ORTHO05D003866 8.0e-33 145.2 336 31.5
Nitab4.5_0001529g0040 Nicotiana tabacum HOM05D003290 ORTHO05D003866 4.0e-32 142.9 126 57.9
Ca_18188_v3 Cicer arietinum L. HOM05D003290 ORTHO05D003866 8.8e-32 141.7 122 58.2
DCAR_030317 Daucus carota HOM05D003290 ORTHO05D003866 4.4e-31 139.4 122 59.8
Aqoxy3G04046 Aquilegia oxysepala HOM05D003290 ORTHO05D003866 7.0e-21 105.5 137 46.0
DCAR_030316 Daucus carota HOM05D003290 ORTHO05D003866 1.7e-19 100.9 137 47.4
CARHR015160 Cardamine hirsuta HOM05D003290 ORTHO05D003866 3.9e-19 99.8 55 90.9
arahy.Tifrunner.gnm1.ann1.GRN8HF Arachis hypogaea HOM05D003290 ORTHO05D003866 6.1e-17 92.4 115 47.8
Cpa.g.sc2.63 Carica papaya HOM05D003290 ORTHO05D003866 2.0e-15 87.4 55 78.2
CiPaw.05G160000 Carya illinoinensis HOM05D003290 ORTHO05D003866 9.8e-15 85.1 54 75.9
Ciclev10018329m.g Citrus clementina HOM05D003290 ORTHO05D003866 1.3e-14 84.7 54 77.8
Haze_10796 Corylus avellana HOM05D003290 ORTHO05D003866 2.9e-14 83.6 54 75.9
TAR629G1764 Trochodendron aralioides HOM05D003290 ORTHO05D003866 2.9e-14 83.6 54 74.1
vmacro10755 Vaccinium macrocarpon HOM05D003290 ORTHO05D003866 4.9e-14 82.8 54 75.9
PGSC0003DMG400010630 Solanum tuberosum HOM05D003290 ORTHO05D003866 5.4e-13 79.3 135 37.8
Cc11_g05260 Coffea canephora HOM05D003290 ORTHO05D003866 3.3e-10 70.1 48 70.8
BcaC05g25382 Brassica carinata HOM05D002594 ORTHO05D003499 8.0e-09 65.5 49 73.5
Aqoxy1G02273 Aquilegia oxysepala HOM05D003290 ORTHO05D003866 4.0e-08 63.2 66 47.0
Oeu005357.1 Olea europaea HOM05D003290 ORTHO05D003866 6.8e-08 62.4 42 69.0
Peaxi162Scf00130g01216 Petunia axillaris HOM05D003290 ORTHO05D003866 4.4e-07 59.7 122 32.0
MCO04G150 Micromonas commoda HOM05D003290 ORTHO05D003866 1.3e-06 58.2 51 49.0
Haze_10795 Corylus avellana HOM05D003290 ORTHO05D003866 2.2e-06 57.4 49 63.3


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