Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G48030 Arabidopsis lyrata HOM05D007324 ORTHO05D007884 1.8e-35 152.5 105 100.0
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 3.1e-24 115.2 105 61.0
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 5.3e-24 114.4 105 58.1
Sp1g28340 Schrenkiella parvula HOM05D007324 ORTHO05D007884 1.2e-23 113.2 105 75.2
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 3.5e-23 111.7 105 61.0
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 3.2e-21 105.1 100 57.0
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 3.2e-21 105.1 100 57.0
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 3.6e-20 101.7 105 58.1
BcaB07g32955 Brassica carinata HOM05D007324 ORTHO05D007884 8.0e-20 100.5 105 63.8
C05p32110 Brassica napus HOM05D007324 ORTHO05D007884 8.0e-20 100.5 105 57.1
BolC5t31940H Brassica oleracea HOM05D007324 ORTHO05D007884 8.0e-20 100.5 105 57.1
Aa31LG2G13400 Aethionema arabicum HOM05D007324 ORTHO05D007884 6.8e-19 97.4 107 68.2
C05p32030 Brassica napus HOM05D007324 ORTHO05D007884 1.5e-18 96.3 105 56.2
A09p33650 Brassica napus HOM05D007324 ORTHO05D007884 4.4e-18 94.7 105 62.9
CARHR032010 Cardamine hirsuta HOM05D007324 ORTHO05D007884 2.8e-17 92.0 106 73.6
AL1G46810 Arabidopsis lyrata HOM05D007324 ORTHO05D007884 7.0e-16 87.4 107 73.8
COL.COLO4_17062 Corchorus olitorius HOM05D007324 ORTHO05D007884 1.1e-08 63.5 101 57.4
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 3.1e-08 62.0 102 43.1
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 4.1e-08 61.6 86 45.3
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 2.7e-07 58.9 94 39.4
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 5.9e-07 57.8 86 40.7
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 5.9e-07 57.8 86 40.7
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 7.7e-07 57.4 90 41.1
BcaC05g27297 Brassica carinata HOM05D007324 ORTHO05D007884 1.3e-06 56.6 104 40.4
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 1.7e-06 56.2 101 39.6
EL10Ac5g12140 Beta vulgaris HOM05D028673 ORTHO05D031676 2.9e-06 55.5 86 60.5
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 2.9e-06 55.5 108 39.8
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 3.8e-06 55.1 100 37.0
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 3.8e-06 55.1 93 40.9
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 6.6e-06 54.3 90 40.0
Hund11251 Selenicereus undatus HOM05D007324 ORTHO05D007884 6.6e-06 54.3 75 65.3
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 8.6e-06 53.9 107 36.4


User provided reference genes

Program Settings